Protein–RNA interactions for Protein: P01374

LTA, Lymphotoxin-alpha, humanhuman

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTAP01374 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC19.34■□□□□ 0.69
LTAP01374 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC19.34■□□□□ 0.69
LTAP01374 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
LTAP01374 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
LTAP01374 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
LTAP01374 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC19.33■□□□□ 0.68
LTAP01374 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC19.32■□□□□ 0.68
LTAP01374 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
LTAP01374 FAM58A-202ENST00000440428 1164 ntAPPRIS P2 TSL 2 BASIC19.32■□□□□ 0.68
LTAP01374 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
LTAP01374 AL449106.1-201ENST00000608517 1980 ntBASIC19.32■□□□□ 0.68
LTAP01374 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC19.31■□□□□ 0.68
LTAP01374 PKM-203ENST00000389093 2279 ntTSL 5 BASIC19.31■□□□□ 0.68
LTAP01374 H2AFV-202ENST00000308153 752 ntAPPRIS P4 TSL 1 (best) BASIC19.31■□□□□ 0.68
LTAP01374 ANAPC11-203ENST00000392376 687 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
LTAP01374 AL133380.1-201ENST00000506013 324 ntBASIC19.31■□□□□ 0.68
LTAP01374 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
LTAP01374 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
LTAP01374 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
LTAP01374 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
LTAP01374 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC19.29■□□□□ 0.68
LTAP01374 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC19.29■□□□□ 0.68
LTAP01374 AP002365.1-201ENST00000603448 772 ntBASIC19.28■□□□□ 0.68
LTAP01374 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
LTAP01374 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
LTAP01374 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC19.27■□□□□ 0.68
LTAP01374 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
LTAP01374 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
LTAP01374 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
LTAP01374 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
LTAP01374 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
LTAP01374 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
LTAP01374 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
LTAP01374 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
LTAP01374 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
LTAP01374 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
LTAP01374 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
LTAP01374 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
LTAP01374 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC19.24■□□□□ 0.67
LTAP01374 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
LTAP01374 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC19.24■□□□□ 0.67
LTAP01374 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC19.23■□□□□ 0.67
LTAP01374 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
LTAP01374 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC19.23■□□□□ 0.67
LTAP01374 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC19.23■□□□□ 0.67
LTAP01374 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
LTAP01374 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC19.23■□□□□ 0.67
LTAP01374 KLF16-203ENST00000592313 508 ntTSL 3 BASIC19.22■□□□□ 0.67
LTAP01374 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
LTAP01374 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC19.22■□□□□ 0.67
LTAP01374 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
LTAP01374 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
LTAP01374 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
LTAP01374 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
LTAP01374 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
LTAP01374 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC19.21■□□□□ 0.67
LTAP01374 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
LTAP01374 ARTN-211ENST00000498139 1303 ntAPPRIS P4 TSL 1 (best) BASIC19.21■□□□□ 0.67
LTAP01374 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC19.21■□□□□ 0.67
LTAP01374 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC19.2■□□□□ 0.66
LTAP01374 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
LTAP01374 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
LTAP01374 HRH3-201ENST00000317393 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
LTAP01374 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC19.2■□□□□ 0.66
LTAP01374 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
LTAP01374 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
LTAP01374 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
LTAP01374 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
LTAP01374 AC127502.1-201ENST00000399971 1502 ntBASIC19.2■□□□□ 0.66
LTAP01374 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
LTAP01374 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
LTAP01374 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
LTAP01374 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
LTAP01374 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC19.19■□□□□ 0.66
LTAP01374 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC19.18■□□□□ 0.66
LTAP01374 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
LTAP01374 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
LTAP01374 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
LTAP01374 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
LTAP01374 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
LTAP01374 AC091060.1-201ENST00000623524 1766 ntBASIC19.17■□□□□ 0.66
LTAP01374 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
LTAP01374 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
LTAP01374 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
LTAP01374 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
LTAP01374 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
LTAP01374 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC19.16■□□□□ 0.66
LTAP01374 MAP6D1-202ENST00000431348 890 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
LTAP01374 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC19.15■□□□□ 0.66
LTAP01374 AC100797.4-201ENST00000631653 1827 ntBASIC19.15■□□□□ 0.66
LTAP01374 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
LTAP01374 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
LTAP01374 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
LTAP01374 ARTN-201ENST00000372354 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
LTAP01374 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC19.14■□□□□ 0.65
LTAP01374 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
LTAP01374 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
LTAP01374 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
LTAP01374 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
LTAP01374 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC19.12■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 63.3 ms