Protein–RNA interactions for Protein: O00458

IFRD1, Interferon-related developmental regulator 1, humanhuman

Predicted RBP Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFRD1O00458 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC25.29■■□□□ 1.64
IFRD1O00458 CALM3-209ENST00000597743 577 ntTSL 4 BASIC25.29■■□□□ 1.64
IFRD1O00458 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC25.29■■□□□ 1.64
IFRD1O00458 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC25.28■■□□□ 1.64
IFRD1O00458 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC25.28■■□□□ 1.64
IFRD1O00458 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
IFRD1O00458 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC25.28■■□□□ 1.64
IFRD1O00458 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC25.27■■□□□ 1.64
IFRD1O00458 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC25.27■■□□□ 1.64
IFRD1O00458 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC25.27■■□□□ 1.64
IFRD1O00458 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
IFRD1O00458 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
IFRD1O00458 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC25.26■■□□□ 1.63
IFRD1O00458 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC25.26■■□□□ 1.63
IFRD1O00458 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC25.26■■□□□ 1.63
IFRD1O00458 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC25.25■■□□□ 1.63
IFRD1O00458 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC25.25■■□□□ 1.63
IFRD1O00458 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
IFRD1O00458 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC25.24■■□□□ 1.63
IFRD1O00458 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC25.24■■□□□ 1.63
IFRD1O00458 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
IFRD1O00458 LINC01971-201ENST00000617888 1048 ntBASIC25.23■■□□□ 1.63
IFRD1O00458 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
IFRD1O00458 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
IFRD1O00458 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC25.23■■□□□ 1.63
IFRD1O00458 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
IFRD1O00458 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC25.22■■□□□ 1.63
IFRD1O00458 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
IFRD1O00458 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC25.22■■□□□ 1.63
IFRD1O00458 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
IFRD1O00458 MIR7108-201ENST00000614319 87 ntBASIC25.22■■□□□ 1.63
IFRD1O00458 AC142086.6-201ENST00000621154 1765 ntBASIC25.21■■□□□ 1.63
IFRD1O00458 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC25.21■■□□□ 1.63
IFRD1O00458 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC25.21■■□□□ 1.63
IFRD1O00458 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC25.21■■□□□ 1.63
IFRD1O00458 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC25.21■■□□□ 1.63
IFRD1O00458 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
IFRD1O00458 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC25.21■■□□□ 1.63
IFRD1O00458 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
IFRD1O00458 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC25.2■■□□□ 1.62
IFRD1O00458 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC25.2■■□□□ 1.62
IFRD1O00458 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
IFRD1O00458 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC25.18■■□□□ 1.62
IFRD1O00458 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC25.18■■□□□ 1.62
IFRD1O00458 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC25.18■■□□□ 1.62
IFRD1O00458 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
IFRD1O00458 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC25.17■■□□□ 1.62
IFRD1O00458 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC25.17■■□□□ 1.62
IFRD1O00458 AC135983.2-203ENST00000454486 1613 ntBASIC25.17■■□□□ 1.62
IFRD1O00458 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC25.17■■□□□ 1.62
IFRD1O00458 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC25.17■■□□□ 1.62
IFRD1O00458 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC25.17■■□□□ 1.62
IFRD1O00458 AP004833.2-201ENST00000532228 1454 ntBASIC25.16■■□□□ 1.62
IFRD1O00458 AL139393.2-201ENST00000608721 2025 ntBASIC25.15■■□□□ 1.62
IFRD1O00458 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
IFRD1O00458 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
IFRD1O00458 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC25.14■■□□□ 1.62
IFRD1O00458 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC25.14■■□□□ 1.62
IFRD1O00458 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.61
IFRD1O00458 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC25.13■■□□□ 1.61
IFRD1O00458 DUX4L11-201ENST00000611504 1267 ntBASIC25.13■■□□□ 1.61
IFRD1O00458 DUX4L12-201ENST00000614593 1267 ntBASIC25.13■■□□□ 1.61
IFRD1O00458 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC25.13■■□□□ 1.61
IFRD1O00458 DUX4L14-201ENST00000621227 1267 ntBASIC25.13■■□□□ 1.61
IFRD1O00458 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
IFRD1O00458 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
IFRD1O00458 WHAMMP2-203ENST00000563942 1603 ntBASIC25.12■■□□□ 1.61
IFRD1O00458 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC25.12■■□□□ 1.61
IFRD1O00458 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
IFRD1O00458 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC25.11■■□□□ 1.61
IFRD1O00458 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
IFRD1O00458 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC25.11■■□□□ 1.61
IFRD1O00458 PVT1-219ENST00000523427 938 ntTSL 3 BASIC25.1■■□□□ 1.61
IFRD1O00458 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
IFRD1O00458 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
IFRD1O00458 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC25.09■■□□□ 1.61
IFRD1O00458 RNF166-209ENST00000567844 633 ntTSL 5 BASIC25.09■■□□□ 1.61
IFRD1O00458 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC25.09■■□□□ 1.61
IFRD1O00458 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
IFRD1O00458 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
IFRD1O00458 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC25.08■■□□□ 1.61
IFRD1O00458 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC25.08■■□□□ 1.6
IFRD1O00458 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC25.07■■□□□ 1.6
IFRD1O00458 AGPS-202ENST00000409888 815 ntTSL 4 BASIC25.07■■□□□ 1.6
IFRD1O00458 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC25.07■■□□□ 1.6
IFRD1O00458 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
IFRD1O00458 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
IFRD1O00458 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC25.06■■□□□ 1.6
IFRD1O00458 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC25.06■■□□□ 1.6
IFRD1O00458 MEST-211ENST00000437945 1455 ntTSL 5 BASIC25.06■■□□□ 1.6
IFRD1O00458 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
IFRD1O00458 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
IFRD1O00458 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC25.05■■□□□ 1.6
IFRD1O00458 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC25.05■■□□□ 1.6
IFRD1O00458 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC25.05■■□□□ 1.6
IFRD1O00458 DUX4L13-201ENST00000554103 1267 ntBASIC25.05■■□□□ 1.6
IFRD1O00458 DUX4L15-201ENST00000611059 1267 ntBASIC25.05■■□□□ 1.6
IFRD1O00458 DUX4L23-201ENST00000615195 1269 ntBASIC25.05■■□□□ 1.6
IFRD1O00458 DUX4L24-201ENST00000617576 1269 ntBASIC25.05■■□□□ 1.6
IFRD1O00458 DUX4L22-201ENST00000618238 1269 ntBASIC25.05■■□□□ 1.6
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms