Protein–RNA interactions for Protein: O00411

POLRMT, DNA-directed RNA polymerase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,230 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLRMTO00411 FOXD1-202ENST00000615637 2272 ntAPPRIS P1 BASIC32.65■■■□□ 2.82
POLRMTO00411 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC32.65■■■□□ 2.82
POLRMTO00411 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC32.65■■■□□ 2.82
POLRMTO00411 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC32.65■■■□□ 2.82
POLRMTO00411 U85056.1-201ENST00000616429 682 ntBASIC32.64■■■□□ 2.82
POLRMTO00411 AC018358.1-201ENST00000631079 1402 ntBASIC32.64■■■□□ 2.82
POLRMTO00411 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC32.63■■■□□ 2.81
POLRMTO00411 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC32.63■■■□□ 2.81
POLRMTO00411 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC32.63■■■□□ 2.81
POLRMTO00411 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC32.63■■■□□ 2.81
POLRMTO00411 CHST11-203ENST00000547956 936 ntTSL 2 BASIC32.63■■■□□ 2.81
POLRMTO00411 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC32.62■■■□□ 2.81
POLRMTO00411 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC32.61■■■□□ 2.81
POLRMTO00411 SIAH1-203ENST00000394725 2147 ntAPPRIS P3 TSL 1 (best) BASIC32.61■■■□□ 2.81
POLRMTO00411 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC32.61■■■□□ 2.81
POLRMTO00411 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC32.61■■■□□ 2.81
POLRMTO00411 WHAMMP2-203ENST00000563942 1603 ntBASIC32.61■■■□□ 2.81
POLRMTO00411 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC32.6■■■□□ 2.81
POLRMTO00411 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC32.6■■■□□ 2.81
POLRMTO00411 AC135983.2-203ENST00000454486 1613 ntBASIC32.59■■■□□ 2.81
POLRMTO00411 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC32.59■■■□□ 2.81
POLRMTO00411 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC32.59■■■□□ 2.81
POLRMTO00411 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC32.58■■■□□ 2.81
POLRMTO00411 C11orf63-202ENST00000307257 1964 ntTSL 2 BASIC32.58■■■□□ 2.81
POLRMTO00411 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC32.58■■■□□ 2.81
POLRMTO00411 AC060814.1-201ENST00000554326 538 ntBASIC32.58■■■□□ 2.81
POLRMTO00411 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC32.58■■■□□ 2.81
POLRMTO00411 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC32.57■■■□□ 2.81
POLRMTO00411 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC32.57■■■□□ 2.81
POLRMTO00411 HYI-213ENST00000583037 1322 ntTSL 5 BASIC32.57■■■□□ 2.8
POLRMTO00411 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC32.57■■■□□ 2.8
POLRMTO00411 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC32.56■■■□□ 2.8
POLRMTO00411 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC32.56■■■□□ 2.8
POLRMTO00411 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC32.56■■■□□ 2.8
POLRMTO00411 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC32.55■■■□□ 2.8
POLRMTO00411 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC32.55■■■□□ 2.8
POLRMTO00411 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC32.55■■■□□ 2.8
POLRMTO00411 AC127502.1-201ENST00000399971 1502 ntBASIC32.55■■■□□ 2.8
POLRMTO00411 CISD3-204ENST00000613478 2074 ntAPPRIS P1 TSL 2 BASIC32.55■■■□□ 2.8
POLRMTO00411 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC32.54■■■□□ 2.8
POLRMTO00411 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC32.52■■■□□ 2.8
POLRMTO00411 AC148477.6-201ENST00000623746 465 ntBASIC32.51■■■□□ 2.79
POLRMTO00411 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC32.5■■■□□ 2.79
POLRMTO00411 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC32.5■■■□□ 2.79
POLRMTO00411 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC32.5■■■□□ 2.79
POLRMTO00411 GFER-205ENST00000569451 517 ntTSL 5 BASIC32.49■■■□□ 2.79
POLRMTO00411 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC32.49■■■□□ 2.79
POLRMTO00411 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC32.49■■■□□ 2.79
POLRMTO00411 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC32.48■■■□□ 2.79
POLRMTO00411 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC32.48■■■□□ 2.79
POLRMTO00411 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC32.48■■■□□ 2.79
POLRMTO00411 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC32.47■■■□□ 2.79
POLRMTO00411 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC32.46■■■□□ 2.79
POLRMTO00411 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC32.46■■■□□ 2.79
POLRMTO00411 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC32.46■■■□□ 2.79
POLRMTO00411 AC110285.7-201ENST00000624417 1536 ntBASIC32.46■■■□□ 2.79
POLRMTO00411 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC32.45■■■□□ 2.79
POLRMTO00411 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC32.44■■■□□ 2.78
POLRMTO00411 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC32.44■■■□□ 2.78
POLRMTO00411 KRT18P60-201ENST00000312876 1297 ntBASIC32.43■■■□□ 2.78
POLRMTO00411 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC32.43■■■□□ 2.78
POLRMTO00411 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC32.42■■■□□ 2.78
POLRMTO00411 TSPY13P-201ENST00000338964 914 ntBASIC32.41■■■□□ 2.78
POLRMTO00411 AC004987.1-201ENST00000428627 508 ntBASIC32.41■■■□□ 2.78
POLRMTO00411 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC32.41■■■□□ 2.78
POLRMTO00411 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC32.41■■■□□ 2.78
POLRMTO00411 AC092296.2-201ENST00000589470 999 ntBASIC32.41■■■□□ 2.78
POLRMTO00411 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC32.41■■■□□ 2.78
POLRMTO00411 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC32.41■■■□□ 2.78
POLRMTO00411 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC32.4■■■□□ 2.78
POLRMTO00411 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC32.4■■■□□ 2.78
POLRMTO00411 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC32.39■■■□□ 2.78
POLRMTO00411 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC32.39■■■□□ 2.78
POLRMTO00411 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC32.38■■■□□ 2.77
POLRMTO00411 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC32.38■■■□□ 2.77
POLRMTO00411 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC32.37■■■□□ 2.77
POLRMTO00411 ATP5G2P3-201ENST00000429083 425 ntBASIC32.37■■■□□ 2.77
POLRMTO00411 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC32.37■■■□□ 2.77
POLRMTO00411 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC32.36■■■□□ 2.77
POLRMTO00411 RPS2-210ENST00000530225 765 ntTSL 2 BASIC32.36■■■□□ 2.77
POLRMTO00411 MIR219A2-201ENST00000608502 1504 ntBASIC32.36■■■□□ 2.77
POLRMTO00411 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC32.35■■■□□ 2.77
POLRMTO00411 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC32.35■■■□□ 2.77
POLRMTO00411 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC32.35■■■□□ 2.77
POLRMTO00411 CSPG5-205ENST00000610462 2073 ntTSL 5 BASIC32.35■■■□□ 2.77
POLRMTO00411 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC32.34■■■□□ 2.77
POLRMTO00411 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC32.33■■■□□ 2.77
POLRMTO00411 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC32.33■■■□□ 2.77
POLRMTO00411 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC32.33■■■□□ 2.77
POLRMTO00411 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC32.32■■■□□ 2.77
POLRMTO00411 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC32.32■■■□□ 2.77
POLRMTO00411 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC32.32■■■□□ 2.76
POLRMTO00411 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC32.32■■■□□ 2.76
POLRMTO00411 GUK1-208ENST00000366728 842 ntTSL 2 BASIC32.31■■■□□ 2.76
POLRMTO00411 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC32.31■■■□□ 2.76
POLRMTO00411 RARRES2P1-201ENST00000474487 481 ntBASIC32.31■■■□□ 2.76
POLRMTO00411 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC32.31■■■□□ 2.76
POLRMTO00411 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC32.3■■■□□ 2.76
POLRMTO00411 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC32.3■■■□□ 2.76
POLRMTO00411 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC32.29■■■□□ 2.76
Retrieved 100 of 98,524 protein–RNA pairs in 44.4 ms