Protein–RNA interactions for Protein: A6NGU7

LINC01546, Putative uncharacterized protein encoded by LINC01546, humanhuman

Predictions only

Length 62 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01546A6NGU7 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
LINC01546A6NGU7 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
LINC01546A6NGU7 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC18.34■□□□□ 0.53
LINC01546A6NGU7 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
LINC01546A6NGU7 CACNG8-202ENST00000638874 1278 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
LINC01546A6NGU7 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
LINC01546A6NGU7 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC18.34■□□□□ 0.53
LINC01546A6NGU7 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC18.34■□□□□ 0.53
LINC01546A6NGU7 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
LINC01546A6NGU7 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
LINC01546A6NGU7 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
LINC01546A6NGU7 AC010864.1-201ENST00000609407 1511 ntBASIC18.33■□□□□ 0.53
LINC01546A6NGU7 SH3GL1-202ENST00000417295 1404 ntTSL 2 BASIC18.33■□□□□ 0.53
LINC01546A6NGU7 AC020928.2-201ENST00000588717 2197 ntBASIC18.33■□□□□ 0.52
LINC01546A6NGU7 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC18.33■□□□□ 0.52
LINC01546A6NGU7 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC18.33■□□□□ 0.52
LINC01546A6NGU7 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
LINC01546A6NGU7 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
LINC01546A6NGU7 EBPL-203ENST00000378270 579 ntTSL 2 BASIC18.31■□□□□ 0.52
LINC01546A6NGU7 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
LINC01546A6NGU7 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC18.3■□□□□ 0.52
LINC01546A6NGU7 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC18.3■□□□□ 0.52
LINC01546A6NGU7 AC145676.1-201ENST00000514988 2004 ntBASIC18.3■□□□□ 0.52
LINC01546A6NGU7 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
LINC01546A6NGU7 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
LINC01546A6NGU7 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC18.3■□□□□ 0.52
LINC01546A6NGU7 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
LINC01546A6NGU7 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
LINC01546A6NGU7 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
LINC01546A6NGU7 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
LINC01546A6NGU7 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC18.29■□□□□ 0.52
LINC01546A6NGU7 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
LINC01546A6NGU7 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC18.29■□□□□ 0.52
LINC01546A6NGU7 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
LINC01546A6NGU7 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC18.28■□□□□ 0.52
LINC01546A6NGU7 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC18.28■□□□□ 0.52
LINC01546A6NGU7 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC18.28■□□□□ 0.52
LINC01546A6NGU7 LINC01578-201ENST00000553829 732 ntTSL 2 BASIC18.28■□□□□ 0.52
LINC01546A6NGU7 AC093323.1-202ENST00000635031 2045 ntBASIC18.28■□□□□ 0.52
LINC01546A6NGU7 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC18.28■□□□□ 0.52
LINC01546A6NGU7 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
LINC01546A6NGU7 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC18.27■□□□□ 0.52
LINC01546A6NGU7 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC18.27■□□□□ 0.52
LINC01546A6NGU7 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
LINC01546A6NGU7 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
LINC01546A6NGU7 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
LINC01546A6NGU7 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
LINC01546A6NGU7 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
LINC01546A6NGU7 NRGN-201ENST00000284292 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
LINC01546A6NGU7 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
LINC01546A6NGU7 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
LINC01546A6NGU7 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC18.25■□□□□ 0.51
LINC01546A6NGU7 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
LINC01546A6NGU7 AC079848.1-201ENST00000511301 327 ntTSL 3 BASIC18.25■□□□□ 0.51
LINC01546A6NGU7 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
LINC01546A6NGU7 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
LINC01546A6NGU7 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC18.25■□□□□ 0.51
LINC01546A6NGU7 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
LINC01546A6NGU7 FGF2-203ENST00000614010 867 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
LINC01546A6NGU7 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC18.24■□□□□ 0.51
LINC01546A6NGU7 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
LINC01546A6NGU7 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC18.24■□□□□ 0.51
LINC01546A6NGU7 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
LINC01546A6NGU7 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC18.23■□□□□ 0.51
LINC01546A6NGU7 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
LINC01546A6NGU7 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
LINC01546A6NGU7 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
LINC01546A6NGU7 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
LINC01546A6NGU7 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
LINC01546A6NGU7 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
LINC01546A6NGU7 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC18.21■□□□□ 0.51
LINC01546A6NGU7 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC18.21■□□□□ 0.51
LINC01546A6NGU7 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
LINC01546A6NGU7 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
LINC01546A6NGU7 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC18.2■□□□□ 0.5
LINC01546A6NGU7 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
LINC01546A6NGU7 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
LINC01546A6NGU7 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC18.2■□□□□ 0.5
LINC01546A6NGU7 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
LINC01546A6NGU7 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC18.18■□□□□ 0.5
LINC01546A6NGU7 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
LINC01546A6NGU7 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
LINC01546A6NGU7 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC18.18■□□□□ 0.5
LINC01546A6NGU7 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC18.17■□□□□ 0.5
LINC01546A6NGU7 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
LINC01546A6NGU7 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC18.17■□□□□ 0.5
LINC01546A6NGU7 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
LINC01546A6NGU7 GSTZ1-201ENST00000216465 1338 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
LINC01546A6NGU7 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
LINC01546A6NGU7 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC18.16■□□□□ 0.5
LINC01546A6NGU7 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
LINC01546A6NGU7 WASH5P-204ENST00000632292 975 ntBASIC18.16■□□□□ 0.5
LINC01546A6NGU7 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
LINC01546A6NGU7 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
LINC01546A6NGU7 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
LINC01546A6NGU7 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
LINC01546A6NGU7 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
LINC01546A6NGU7 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
LINC01546A6NGU7 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC18.14■□□□□ 0.5
LINC01546A6NGU7 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC18.14■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 13.1 ms