Protein–RNA interactions for Protein: A0A0K0K1A3

TRBV10-1, T-cell receptor beta variable 10-1(gene/pseudogene) (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV10-1A0A0K0K1A3 AC005559.1-201ENST00000589661 871 ntBASIC18.07■□□□□ 0.48
TRBV10-1A0A0K0K1A3 HNRNPLP2-201ENST00000568980 1570 ntBASIC18.07■□□□□ 0.48
TRBV10-1A0A0K0K1A3 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
TRBV10-1A0A0K0K1A3 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TRBV10-1A0A0K0K1A3 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
TRBV10-1A0A0K0K1A3 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
TRBV10-1A0A0K0K1A3 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
TRBV10-1A0A0K0K1A3 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
TRBV10-1A0A0K0K1A3 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
TRBV10-1A0A0K0K1A3 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
TRBV10-1A0A0K0K1A3 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
TRBV10-1A0A0K0K1A3 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC18.04■□□□□ 0.48
TRBV10-1A0A0K0K1A3 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
TRBV10-1A0A0K0K1A3 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
TRBV10-1A0A0K0K1A3 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
TRBV10-1A0A0K0K1A3 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC18.04■□□□□ 0.48
TRBV10-1A0A0K0K1A3 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
TRBV10-1A0A0K0K1A3 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC18.04■□□□□ 0.48
TRBV10-1A0A0K0K1A3 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
TRBV10-1A0A0K0K1A3 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
TRBV10-1A0A0K0K1A3 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
TRBV10-1A0A0K0K1A3 SHF-208ENST00000560734 1731 ntTSL 3 BASIC18.03■□□□□ 0.48
TRBV10-1A0A0K0K1A3 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
TRBV10-1A0A0K0K1A3 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
TRBV10-1A0A0K0K1A3 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
TRBV10-1A0A0K0K1A3 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
TRBV10-1A0A0K0K1A3 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC18.03■□□□□ 0.48
TRBV10-1A0A0K0K1A3 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC18.03■□□□□ 0.48
TRBV10-1A0A0K0K1A3 AC108673.1-201ENST00000510422 1159 ntBASIC18.03■□□□□ 0.48
TRBV10-1A0A0K0K1A3 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC18.03■□□□□ 0.48
TRBV10-1A0A0K0K1A3 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC18.03■□□□□ 0.48
TRBV10-1A0A0K0K1A3 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
TRBV10-1A0A0K0K1A3 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
TRBV10-1A0A0K0K1A3 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
TRBV10-1A0A0K0K1A3 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
TRBV10-1A0A0K0K1A3 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
TRBV10-1A0A0K0K1A3 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
TRBV10-1A0A0K0K1A3 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC18.02■□□□□ 0.48
TRBV10-1A0A0K0K1A3 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC18.02■□□□□ 0.48
TRBV10-1A0A0K0K1A3 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
TRBV10-1A0A0K0K1A3 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.47
TRBV10-1A0A0K0K1A3 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
TRBV10-1A0A0K0K1A3 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
TRBV10-1A0A0K0K1A3 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
TRBV10-1A0A0K0K1A3 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
TRBV10-1A0A0K0K1A3 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
TRBV10-1A0A0K0K1A3 MEST-211ENST00000437945 1455 ntTSL 5 BASIC18.01■□□□□ 0.47
TRBV10-1A0A0K0K1A3 AC100797.4-201ENST00000631653 1827 ntBASIC18■□□□□ 0.47
TRBV10-1A0A0K0K1A3 SUZ12P1-203ENST00000578195 985 ntBASIC18■□□□□ 0.47
TRBV10-1A0A0K0K1A3 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
TRBV10-1A0A0K0K1A3 AP002414.2-202ENST00000590929 1450 ntBASIC18■□□□□ 0.47
TRBV10-1A0A0K0K1A3 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC18■□□□□ 0.47
TRBV10-1A0A0K0K1A3 LINC01003-201ENST00000564834 1764 ntBASIC17.99■□□□□ 0.47
TRBV10-1A0A0K0K1A3 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
TRBV10-1A0A0K0K1A3 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
TRBV10-1A0A0K0K1A3 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
TRBV10-1A0A0K0K1A3 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC17.98■□□□□ 0.47
TRBV10-1A0A0K0K1A3 AL121749.1-202ENST00000609313 2153 ntBASIC17.98■□□□□ 0.47
TRBV10-1A0A0K0K1A3 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC17.98■□□□□ 0.47
TRBV10-1A0A0K0K1A3 EI24-212ENST00000615917 1407 ntTSL 2 BASIC17.98■□□□□ 0.47
TRBV10-1A0A0K0K1A3 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
TRBV10-1A0A0K0K1A3 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
TRBV10-1A0A0K0K1A3 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC17.97■□□□□ 0.47
TRBV10-1A0A0K0K1A3 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
TRBV10-1A0A0K0K1A3 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC17.97■□□□□ 0.47
TRBV10-1A0A0K0K1A3 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC17.97■□□□□ 0.47
TRBV10-1A0A0K0K1A3 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TRBV10-1A0A0K0K1A3 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC17.96■□□□□ 0.47
TRBV10-1A0A0K0K1A3 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TRBV10-1A0A0K0K1A3 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC17.95■□□□□ 0.46
TRBV10-1A0A0K0K1A3 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
TRBV10-1A0A0K0K1A3 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC17.95■□□□□ 0.46
TRBV10-1A0A0K0K1A3 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
TRBV10-1A0A0K0K1A3 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
TRBV10-1A0A0K0K1A3 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TRBV10-1A0A0K0K1A3 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC17.95■□□□□ 0.46
TRBV10-1A0A0K0K1A3 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TRBV10-1A0A0K0K1A3 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
TRBV10-1A0A0K0K1A3 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC17.94■□□□□ 0.46
TRBV10-1A0A0K0K1A3 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC17.94■□□□□ 0.46
TRBV10-1A0A0K0K1A3 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
TRBV10-1A0A0K0K1A3 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
TRBV10-1A0A0K0K1A3 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
TRBV10-1A0A0K0K1A3 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TRBV10-1A0A0K0K1A3 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC17.93■□□□□ 0.46
TRBV10-1A0A0K0K1A3 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TRBV10-1A0A0K0K1A3 MIR3665-201ENST00000578708 105 ntBASIC17.93■□□□□ 0.46
TRBV10-1A0A0K0K1A3 AC135983.2-203ENST00000454486 1613 ntBASIC17.93■□□□□ 0.46
TRBV10-1A0A0K0K1A3 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
TRBV10-1A0A0K0K1A3 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
TRBV10-1A0A0K0K1A3 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC17.92■□□□□ 0.46
TRBV10-1A0A0K0K1A3 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TRBV10-1A0A0K0K1A3 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC17.92■□□□□ 0.46
TRBV10-1A0A0K0K1A3 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
TRBV10-1A0A0K0K1A3 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC17.92■□□□□ 0.46
TRBV10-1A0A0K0K1A3 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TRBV10-1A0A0K0K1A3 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
TRBV10-1A0A0K0K1A3 LINC00273-201ENST00000539813 1452 ntBASIC17.9■□□□□ 0.46
TRBV10-1A0A0K0K1A3 AP006261.1-201ENST00000584783 668 ntBASIC17.9■□□□□ 0.46
TRBV10-1A0A0K0K1A3 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 59.2 ms