Protein–RNA interactions for Protein: A0A087WUM0

SYNJ2BP-COX16, SYNJ2BP-COX16 readthrough (Fragment), humanhuman

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNJ2BP-COX16A0A087WUM0 WHAMMP2-203ENST00000563942 1603 ntBASIC26.87■■□□□ 1.89
SYNJ2BP-COX16A0A087WUM0 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
SYNJ2BP-COX16A0A087WUM0 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC26.86■■□□□ 1.89
SYNJ2BP-COX16A0A087WUM0 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC26.86■■□□□ 1.89
SYNJ2BP-COX16A0A087WUM0 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
SYNJ2BP-COX16A0A087WUM0 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
SYNJ2BP-COX16A0A087WUM0 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC26.85■■□□□ 1.89
SYNJ2BP-COX16A0A087WUM0 AC135983.2-203ENST00000454486 1613 ntBASIC26.85■■□□□ 1.89
SYNJ2BP-COX16A0A087WUM0 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC26.84■■□□□ 1.89
SYNJ2BP-COX16A0A087WUM0 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC26.84■■□□□ 1.89
SYNJ2BP-COX16A0A087WUM0 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC26.84■■□□□ 1.89
SYNJ2BP-COX16A0A087WUM0 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC26.83■■□□□ 1.89
SYNJ2BP-COX16A0A087WUM0 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC26.83■■□□□ 1.89
SYNJ2BP-COX16A0A087WUM0 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC26.83■■□□□ 1.89
SYNJ2BP-COX16A0A087WUM0 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC26.83■■□□□ 1.88
SYNJ2BP-COX16A0A087WUM0 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC26.82■■□□□ 1.88
SYNJ2BP-COX16A0A087WUM0 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC26.82■■□□□ 1.88
SYNJ2BP-COX16A0A087WUM0 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
SYNJ2BP-COX16A0A087WUM0 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC26.81■■□□□ 1.88
SYNJ2BP-COX16A0A087WUM0 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
SYNJ2BP-COX16A0A087WUM0 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC26.81■■□□□ 1.88
SYNJ2BP-COX16A0A087WUM0 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC26.8■■□□□ 1.88
SYNJ2BP-COX16A0A087WUM0 SHF-206ENST00000560471 2499 ntTSL 5 BASIC26.8■■□□□ 1.88
SYNJ2BP-COX16A0A087WUM0 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC26.79■■□□□ 1.88
SYNJ2BP-COX16A0A087WUM0 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
SYNJ2BP-COX16A0A087WUM0 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
SYNJ2BP-COX16A0A087WUM0 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC26.79■■□□□ 1.88
SYNJ2BP-COX16A0A087WUM0 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
SYNJ2BP-COX16A0A087WUM0 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC26.78■■□□□ 1.88
SYNJ2BP-COX16A0A087WUM0 MIR7108-201ENST00000614319 87 ntBASIC26.78■■□□□ 1.88
SYNJ2BP-COX16A0A087WUM0 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC26.78■■□□□ 1.88
SYNJ2BP-COX16A0A087WUM0 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC26.78■■□□□ 1.88
SYNJ2BP-COX16A0A087WUM0 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC26.78■■□□□ 1.88
SYNJ2BP-COX16A0A087WUM0 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
SYNJ2BP-COX16A0A087WUM0 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
SYNJ2BP-COX16A0A087WUM0 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
SYNJ2BP-COX16A0A087WUM0 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
SYNJ2BP-COX16A0A087WUM0 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC26.77■■□□□ 1.88
SYNJ2BP-COX16A0A087WUM0 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.88
SYNJ2BP-COX16A0A087WUM0 AC100797.4-201ENST00000631653 1827 ntBASIC26.76■■□□□ 1.88
SYNJ2BP-COX16A0A087WUM0 AP004833.2-201ENST00000532228 1454 ntBASIC26.76■■□□□ 1.87
SYNJ2BP-COX16A0A087WUM0 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
SYNJ2BP-COX16A0A087WUM0 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC26.76■■□□□ 1.87
SYNJ2BP-COX16A0A087WUM0 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC26.76■■□□□ 1.87
SYNJ2BP-COX16A0A087WUM0 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
SYNJ2BP-COX16A0A087WUM0 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
SYNJ2BP-COX16A0A087WUM0 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC26.75■■□□□ 1.87
SYNJ2BP-COX16A0A087WUM0 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC26.74■■□□□ 1.87
SYNJ2BP-COX16A0A087WUM0 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
SYNJ2BP-COX16A0A087WUM0 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC26.74■■□□□ 1.87
SYNJ2BP-COX16A0A087WUM0 LINC01971-201ENST00000617888 1048 ntBASIC26.74■■□□□ 1.87
SYNJ2BP-COX16A0A087WUM0 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC26.74■■□□□ 1.87
SYNJ2BP-COX16A0A087WUM0 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC26.74■■□□□ 1.87
SYNJ2BP-COX16A0A087WUM0 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC26.74■■□□□ 1.87
SYNJ2BP-COX16A0A087WUM0 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC26.73■■□□□ 1.87
SYNJ2BP-COX16A0A087WUM0 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC26.73■■□□□ 1.87
SYNJ2BP-COX16A0A087WUM0 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC26.73■■□□□ 1.87
SYNJ2BP-COX16A0A087WUM0 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
SYNJ2BP-COX16A0A087WUM0 PVT1-219ENST00000523427 938 ntTSL 3 BASIC26.73■■□□□ 1.87
SYNJ2BP-COX16A0A087WUM0 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC26.73■■□□□ 1.87
SYNJ2BP-COX16A0A087WUM0 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC26.72■■□□□ 1.87
SYNJ2BP-COX16A0A087WUM0 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC26.72■■□□□ 1.87
SYNJ2BP-COX16A0A087WUM0 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC26.71■■□□□ 1.87
SYNJ2BP-COX16A0A087WUM0 DUX4L11-201ENST00000611504 1267 ntBASIC26.71■■□□□ 1.87
SYNJ2BP-COX16A0A087WUM0 DUX4L12-201ENST00000614593 1267 ntBASIC26.71■■□□□ 1.87
SYNJ2BP-COX16A0A087WUM0 DUX4L14-201ENST00000621227 1267 ntBASIC26.71■■□□□ 1.87
SYNJ2BP-COX16A0A087WUM0 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC26.71■■□□□ 1.87
SYNJ2BP-COX16A0A087WUM0 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC26.71■■□□□ 1.87
SYNJ2BP-COX16A0A087WUM0 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.86
SYNJ2BP-COX16A0A087WUM0 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
SYNJ2BP-COX16A0A087WUM0 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC26.69■■□□□ 1.86
SYNJ2BP-COX16A0A087WUM0 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
SYNJ2BP-COX16A0A087WUM0 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC26.69■■□□□ 1.86
SYNJ2BP-COX16A0A087WUM0 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC26.69■■□□□ 1.86
SYNJ2BP-COX16A0A087WUM0 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC26.69■■□□□ 1.86
SYNJ2BP-COX16A0A087WUM0 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC26.69■■□□□ 1.86
SYNJ2BP-COX16A0A087WUM0 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
SYNJ2BP-COX16A0A087WUM0 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC26.69■■□□□ 1.86
SYNJ2BP-COX16A0A087WUM0 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC26.69■■□□□ 1.86
SYNJ2BP-COX16A0A087WUM0 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC26.69■■□□□ 1.86
SYNJ2BP-COX16A0A087WUM0 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC26.69■■□□□ 1.86
SYNJ2BP-COX16A0A087WUM0 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC26.68■■□□□ 1.86
SYNJ2BP-COX16A0A087WUM0 RNF166-209ENST00000567844 633 ntTSL 5 BASIC26.67■■□□□ 1.86
SYNJ2BP-COX16A0A087WUM0 MEST-211ENST00000437945 1455 ntTSL 5 BASIC26.67■■□□□ 1.86
SYNJ2BP-COX16A0A087WUM0 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC26.66■■□□□ 1.86
SYNJ2BP-COX16A0A087WUM0 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
SYNJ2BP-COX16A0A087WUM0 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC26.65■■□□□ 1.86
SYNJ2BP-COX16A0A087WUM0 CHML-204ENST00000638121 920 ntTSL 2 BASIC26.65■■□□□ 1.86
SYNJ2BP-COX16A0A087WUM0 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC26.65■■□□□ 1.86
SYNJ2BP-COX16A0A087WUM0 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC26.64■■□□□ 1.86
SYNJ2BP-COX16A0A087WUM0 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.86
SYNJ2BP-COX16A0A087WUM0 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC26.64■■□□□ 1.86
SYNJ2BP-COX16A0A087WUM0 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC26.64■■□□□ 1.85
SYNJ2BP-COX16A0A087WUM0 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC26.64■■□□□ 1.85
SYNJ2BP-COX16A0A087WUM0 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.85
SYNJ2BP-COX16A0A087WUM0 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC26.63■■□□□ 1.85
SYNJ2BP-COX16A0A087WUM0 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC26.63■■□□□ 1.85
SYNJ2BP-COX16A0A087WUM0 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC26.63■■□□□ 1.85
SYNJ2BP-COX16A0A087WUM0 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
SYNJ2BP-COX16A0A087WUM0 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC26.62■■□□□ 1.85
Retrieved 100 of 98,524 protein–RNA pairs in 47.2 ms