Protein–RNA interactions for Protein: Q8N1N4

KRT78, Keratin, type II cytoskeletal 78, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT78Q8N1N4 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC18.95■□□□□ 0.62
KRT78Q8N1N4 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC18.94■□□□□ 0.62
KRT78Q8N1N4 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
KRT78Q8N1N4 TFP1-202ENST00000475455 1573 ntBASIC18.94■□□□□ 0.62
KRT78Q8N1N4 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC18.94■□□□□ 0.62
KRT78Q8N1N4 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC18.94■□□□□ 0.62
KRT78Q8N1N4 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC18.94■□□□□ 0.62
KRT78Q8N1N4 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
KRT78Q8N1N4 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC18.94■□□□□ 0.62
KRT78Q8N1N4 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
KRT78Q8N1N4 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC18.94■□□□□ 0.62
KRT78Q8N1N4 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
KRT78Q8N1N4 AC124283.5-201ENST00000624661 1809 ntBASIC18.94■□□□□ 0.62
KRT78Q8N1N4 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC18.94■□□□□ 0.62
KRT78Q8N1N4 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC18.94■□□□□ 0.62
KRT78Q8N1N4 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC18.94■□□□□ 0.62
KRT78Q8N1N4 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
KRT78Q8N1N4 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC18.94■□□□□ 0.62
KRT78Q8N1N4 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
KRT78Q8N1N4 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC18.94■□□□□ 0.62
KRT78Q8N1N4 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
KRT78Q8N1N4 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
KRT78Q8N1N4 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
KRT78Q8N1N4 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
KRT78Q8N1N4 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC18.93■□□□□ 0.62
KRT78Q8N1N4 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC18.93■□□□□ 0.62
KRT78Q8N1N4 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
KRT78Q8N1N4 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC18.93■□□□□ 0.62
KRT78Q8N1N4 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC18.93■□□□□ 0.62
KRT78Q8N1N4 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
KRT78Q8N1N4 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC18.93■□□□□ 0.62
KRT78Q8N1N4 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
KRT78Q8N1N4 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
KRT78Q8N1N4 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
KRT78Q8N1N4 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC18.93■□□□□ 0.62
KRT78Q8N1N4 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC18.93■□□□□ 0.62
KRT78Q8N1N4 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC18.93■□□□□ 0.62
KRT78Q8N1N4 GAS7-202ENST00000396115 929 ntTSL 5 BASIC18.93■□□□□ 0.62
KRT78Q8N1N4 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC18.93■□□□□ 0.62
KRT78Q8N1N4 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC18.93■□□□□ 0.62
KRT78Q8N1N4 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
KRT78Q8N1N4 KRT18P6-201ENST00000555540 1265 ntBASIC18.93■□□□□ 0.62
KRT78Q8N1N4 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC18.93■□□□□ 0.62
KRT78Q8N1N4 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
KRT78Q8N1N4 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
KRT78Q8N1N4 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
KRT78Q8N1N4 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC18.93■□□□□ 0.62
KRT78Q8N1N4 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC18.93■□□□□ 0.62
KRT78Q8N1N4 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC18.93■□□□□ 0.62
KRT78Q8N1N4 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC18.93■□□□□ 0.62
KRT78Q8N1N4 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC18.93■□□□□ 0.62
KRT78Q8N1N4 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC18.92■□□□□ 0.62
KRT78Q8N1N4 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC18.92■□□□□ 0.62
KRT78Q8N1N4 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
KRT78Q8N1N4 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
KRT78Q8N1N4 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
KRT78Q8N1N4 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC18.92■□□□□ 0.62
KRT78Q8N1N4 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
KRT78Q8N1N4 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
KRT78Q8N1N4 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC18.92■□□□□ 0.62
KRT78Q8N1N4 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
KRT78Q8N1N4 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC18.92■□□□□ 0.62
KRT78Q8N1N4 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
KRT78Q8N1N4 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
KRT78Q8N1N4 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
KRT78Q8N1N4 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
KRT78Q8N1N4 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
KRT78Q8N1N4 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
KRT78Q8N1N4 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC18.92■□□□□ 0.62
KRT78Q8N1N4 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC18.92■□□□□ 0.62
KRT78Q8N1N4 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
KRT78Q8N1N4 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
KRT78Q8N1N4 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
KRT78Q8N1N4 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
KRT78Q8N1N4 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC18.92■□□□□ 0.62
KRT78Q8N1N4 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC18.92■□□□□ 0.62
KRT78Q8N1N4 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
KRT78Q8N1N4 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC18.92■□□□□ 0.62
KRT78Q8N1N4 AC125437.2-201ENST00000625180 2167 ntBASIC18.92■□□□□ 0.62
KRT78Q8N1N4 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
KRT78Q8N1N4 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
KRT78Q8N1N4 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC18.91■□□□□ 0.62
KRT78Q8N1N4 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
KRT78Q8N1N4 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
KRT78Q8N1N4 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC18.91■□□□□ 0.62
KRT78Q8N1N4 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
KRT78Q8N1N4 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC18.91■□□□□ 0.62
KRT78Q8N1N4 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
KRT78Q8N1N4 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
KRT78Q8N1N4 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
KRT78Q8N1N4 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC18.91■□□□□ 0.62
KRT78Q8N1N4 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
KRT78Q8N1N4 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC18.91■□□□□ 0.62
KRT78Q8N1N4 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC18.91■□□□□ 0.62
KRT78Q8N1N4 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
KRT78Q8N1N4 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC18.91■□□□□ 0.62
KRT78Q8N1N4 AL121829.2-201ENST00000620908 328 ntBASIC18.91■□□□□ 0.62
KRT78Q8N1N4 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
KRT78Q8N1N4 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
KRT78Q8N1N4 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 71.5 ms