RNA–Protein interactions for RNA: ENST00000563232.1

EARS2-206, Transcript of glutamyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 1 (best) BASIC

Gene EARS2, Length 1,709 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EARS2-206ENST00000563232 NISCHQ9Y2I1 1504 aa44.34■■■■■ 4.69
EARS2-206ENST00000563232 CCDC180Q9P1Z9 1646 aa38.78■■■■□ 3.8
EARS2-206ENST00000563232 ZCCHC6Q5VYS8 1495 aaKnown RBP37.25■■■■□ 3.55
EARS2-206ENST00000563232 DCAF1Q9Y4B6 1507 aa36.71■■■■□ 3.47
EARS2-206ENST00000563232 DCAF8L2P0C7V8 631 aa36.62■■■■□ 3.45
EARS2-206ENST00000563232 ABCC9O60706 1549 aa36.56■■■■□ 3.44
EARS2-206ENST00000563232 MYO15BQ96JP2 1530 aa36.28■■■■□ 3.4
EARS2-206ENST00000563232 SHROOM4Q9ULL8 1493 aa36.11■■■■□ 3.37
EARS2-206ENST00000563232 NACADO15069 1562 aa36.09■■■■□ 3.37
EARS2-206ENST00000563232 RB1CC1Q8TDY2 1594 aa35.8■■■■□ 3.32
EARS2-206ENST00000563232 SCRIBQ14160 1630 aa35.58■■■■□ 3.29
EARS2-206ENST00000563232 UNC13AQ9UPW8 1703 aa35.05■■■■□ 3.2
EARS2-206ENST00000563232 SUPT5HO00267 1087 aaKnown RBP34.77■■■■□ 3.16
EARS2-206ENST00000563232 BICRAQ9NZM4 1560 aa34.6■■■■□ 3.13
EARS2-206ENST00000563232 PABPN1Q86U42 306 aaKnown RBP eCLIP34.42■■■■□ 3.1
EARS2-206ENST00000563232 CECR2Q9BXF3 1484 aa34.38■■■■□ 3.09
EARS2-206ENST00000563232 RSF1Q96T23 1441 aaPredicted RBP34.35■■■■□ 3.09
EARS2-206ENST00000563232 BAZ1AQ9NRL2 1556 aaPredicted RBP34.3■■■■□ 3.08
EARS2-206ENST00000563232 MROH2BQ7Z745 1585 aa34.22■■■■□ 3.07
EARS2-206ENST00000563232 SMARCA4P51532 1647 aa34.12■■■■□ 3.05
EARS2-206ENST00000563232 WIZO95785 1651 aa33.98■■■■□ 3.03
EARS2-206ENST00000563232 PEG3Q9GZU2 1588 aa33.69■■■□□ 2.98
EARS2-206ENST00000563232 TOP2AP11388 1531 aaKnown RBP33.67■■■□□ 2.98
EARS2-206ENST00000563232 EIF4G1Q04637 1599 aaKnown RBP33.61■■■□□ 2.97
EARS2-206ENST00000563232 SMARCA2P51531 1590 aa33.59■■■□□ 2.97
EARS2-206ENST00000563232 ATAD2BQ9ULI0 1458 aa33.51■■■□□ 2.96
EARS2-206ENST00000563232 BAZ1BQ9UIG0 1483 aaKnown RBP33.38■■■□□ 2.93
EARS2-206ENST00000563232 CCDC88BA6NC98 1476 aa33.26■■■□□ 2.91
EARS2-206ENST00000563232 CHIC1Q5VXU3 224 aa33.25■■■□□ 2.91
EARS2-206ENST00000563232 HMGXB3Q12766 1538 aa33.25■■■□□ 2.91
EARS2-206ENST00000563232 NCAPD3P42695 1498 aa33.24■■■□□ 2.91
EARS2-206ENST00000563232 CC2D2AQ9P2K1 1620 aa33.11■■■□□ 2.89
EARS2-206ENST00000563232 TRIM41Q8WV44 630 aa32.74■■■□□ 2.83
EARS2-206ENST00000563232 ABCC8Q09428 1581 aa32.56■■■□□ 2.8
EARS2-206ENST00000563232 CFTRP13569 1480 aa32.49■■■□□ 2.79
EARS2-206ENST00000563232 PRDM2Q13029 1718 aa32.48■■■□□ 2.79
EARS2-206ENST00000563232 WRNQ14191 1432 aaPredicted RBP eCLIP32.4■■■□□ 2.78
EARS2-206ENST00000563232 CADPSQ9ULU8 1353 aa32.39■■■□□ 2.78
EARS2-206ENST00000563232 SYNJ1O43426 1573 aa32.23■■■□□ 2.75
EARS2-206ENST00000563232 LAMC3Q9Y6N6 1575 aa32.18■■■□□ 2.74
EARS2-206ENST00000563232 TOP2BQ02880 1626 aa32.16■■■□□ 2.74
EARS2-206ENST00000563232 BIVM-ERCC5R4GMW8 1640 aa32.14■■■□□ 2.74
EARS2-206ENST00000563232 DNAJC5BQ9UF47 199 aa32.09■■■□□ 2.73
EARS2-206ENST00000563232 FAM9AQ8IZU1 332 aaPredicted RBP32.09■■■□□ 2.73
EARS2-206ENST00000563232 NESP48681 1621 aa32.06■■■□□ 2.72
EARS2-206ENST00000563232 FANCD2Q9BXW9 1451 aa32.05■■■□□ 2.72
EARS2-206ENST00000563232 CUX1P39880 1505 aa32.01■■■□□ 2.71
EARS2-206ENST00000563232 EEA1Q15075 1411 aa32■■■□□ 2.71
EARS2-206ENST00000563232 LOC105371045A0A1W2PR82 267 aa31.93■■■□□ 2.7
EARS2-206ENST00000563232 PDS5BQ9NTI5 1447 aa31.92■■■□□ 2.7
EARS2-206ENST00000563232 SOGA1O94964 1423 aa31.91■■■□□ 2.7
EARS2-206ENST00000563232 CEP164Q9UPV0 1460 aa31.89■■■□□ 2.7
EARS2-206ENST00000563232 DNMBPQ6XZF7 1577 aa31.8■■■□□ 2.68
EARS2-206ENST00000563232 KIF21AQ7Z4S6 1674 aa31.77■■■□□ 2.68
EARS2-206ENST00000563232 RUSC2Q8N2Y8 1516 aa31.77■■■□□ 2.68
EARS2-206ENST00000563232 CSRNP3Q8WYN3 585 aa31.74■■■□□ 2.67
EARS2-206ENST00000563232 TOPBP1Q92547 1522 aa31.7■■■□□ 2.67
EARS2-206ENST00000563232 FGD5Q6ZNL6 1462 aa31.69■■■□□ 2.66
EARS2-206ENST00000563232 URB2Q14146 1524 aaKnown RBP31.61■■■□□ 2.65
EARS2-206ENST00000563232 EHMT2Q96KQ7 1210 aa31.61■■■□□ 2.65
EARS2-206ENST00000563232 KIF27Q86VH2 1401 aa31.6■■■□□ 2.65
EARS2-206ENST00000563232 KIF21BO75037 1637 aa31.56■■■□□ 2.64
EARS2-206ENST00000563232 POLA1P09884 1462 aaPredicted RBP31.53■■■□□ 2.64
EARS2-206ENST00000563232 GOLGA3Q08378 1498 aa31.53■■■□□ 2.64
EARS2-206ENST00000563232 CUX2O14529 1486 aa31.5■■■□□ 2.63
EARS2-206ENST00000563232 MRC2Q9UBG0 1479 aa31.5■■■□□ 2.63
EARS2-206ENST00000563232 ERCC6Q03468 1493 aa31.43■■■□□ 2.62
EARS2-206ENST00000563232 ABCA10Q8WWZ4 1543 aa31.42■■■□□ 2.62
EARS2-206ENST00000563232 RAD54L2Q9Y4B4 1467 aa31.39■■■□□ 2.62
EARS2-206ENST00000563232 TNIKQ9UKE5 1360 aa31.38■■■□□ 2.61
EARS2-206ENST00000563232 UBTFP17480 764 aaKnown RBP31.37■■■□□ 2.61
EARS2-206ENST00000563232 WDR97A6NE52 1622 aa31.35■■■□□ 2.61
EARS2-206ENST00000563232 ERICH3Q5RHP9 1530 aa31.35■■■□□ 2.61
EARS2-206ENST00000563232 PRXQ9BXM0 1461 aa31.33■■■□□ 2.61
EARS2-206ENST00000563232 WDR62O43379 1518 aa31.32■■■□□ 2.6
EARS2-206ENST00000563232 RAPGEF2Q9Y4G8 1499 aa31.29■■■□□ 2.6
EARS2-206ENST00000563232 IGF1RP08069 1367 aa31.23■■■□□ 2.59
EARS2-206ENST00000563232 TARBP1Q13395 1621 aaKnown RBP31.22■■■□□ 2.59
EARS2-206ENST00000563232 THOC2Q8NI27 1593 aaKnown RBP31.22■■■□□ 2.59
EARS2-206ENST00000563232 CEP162Q5TB80 1403 aa31.21■■■□□ 2.59
EARS2-206ENST00000563232 ABCA5Q8WWZ7 1642 aa31.18■■■□□ 2.58
EARS2-206ENST00000563232 CUL7Q14999 1698 aa31.15■■■□□ 2.58
EARS2-206ENST00000563232 CARMIL1Q5VZK9 1371 aa31.13■■■□□ 2.57
EARS2-206ENST00000563232 IFT140Q96RY7 1462 aa31.12■■■□□ 2.57
EARS2-206ENST00000563232 GAPVD1Q14C86 1478 aa31.11■■■□□ 2.57
EARS2-206ENST00000563232 TDRD9Q8NDG6 1382 aaKnown RBP31.1■■■□□ 2.57
EARS2-206ENST00000563232 PBRM1Q86U86 1689 aa31.01■■■□□ 2.55
EARS2-206ENST00000563232 CLIP1P30622 1438 aa31■■■□□ 2.55
EARS2-206ENST00000563232 AQRO60306 1485 aaKnown RBP eCLIP30.89■■■□□ 2.548e-7■■■■■ 28.7
EARS2-206ENST00000563232 GRIN2BQ13224 1484 aa30.88■■■□□ 2.53
EARS2-206ENST00000563232 ZNF608Q9ULD9 1512 aaPredicted RBP30.85■■■□□ 2.53
EARS2-206ENST00000563232 EIF4G3O43432 1585 aaKnown RBP30.84■■■□□ 2.53
EARS2-206ENST00000563232 CTTNBP2Q8WZ74 1663 aa30.81■■■□□ 2.52
EARS2-206ENST00000563232 RANGAP1P46060 587 aaPredicted RBP30.81■■■□□ 2.52
EARS2-206ENST00000563232 ADAMTS12P58397 1594 aa30.79■■■□□ 2.52
EARS2-206ENST00000563232 FHAD1B1AJZ9 1412 aa30.78■■■□□ 2.52
EARS2-206ENST00000563232 VPS8Q8N3P4 1428 aa30.72■■■□□ 2.51
EARS2-206ENST00000563232 SNAPC4Q5SXM2 1469 aa30.65■■■□□ 2.5
EARS2-206ENST00000563232 ARAP1Q96P48 1450 aa30.64■■■□□ 2.5
EARS2-206ENST00000563232 ARHGAP35Q9NRY4 1499 aa30.64■■■□□ 2.5
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms