RNA–Protein interactions for RNA: ENST00000559271.1

RPUSD2-202, Transcript of RNA pseudouridylate synthase domain containing 2, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene RPUSD2, Length 1,558 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD2-202ENST00000559271 NISCHQ9Y2I1 1504 aa45.41■■■■■ 4.86
RPUSD2-202ENST00000559271 CCDC180Q9P1Z9 1646 aa39.86■■■■□ 3.97
RPUSD2-202ENST00000559271 ABCC9O60706 1549 aa38.28■■■■□ 3.72
RPUSD2-202ENST00000559271 ZCCHC6Q5VYS8 1495 aaKnown RBP38.12■■■■□ 3.69
RPUSD2-202ENST00000559271 DCAF1Q9Y4B6 1507 aa37.62■■■■□ 3.61
RPUSD2-202ENST00000559271 DCAF8L2P0C7V8 631 aa37.42■■■■□ 3.58
RPUSD2-202ENST00000559271 MYO15BQ96JP2 1530 aa37.31■■■■□ 3.56
RPUSD2-202ENST00000559271 NACADO15069 1562 aa37.16■■■■□ 3.54
RPUSD2-202ENST00000559271 RB1CC1Q8TDY2 1594 aa36.92■■■■□ 3.5
RPUSD2-202ENST00000559271 SHROOM4Q9ULL8 1493 aa36.67■■■■□ 3.46
RPUSD2-202ENST00000559271 SCRIBQ14160 1630 aa36.52■■■■□ 3.44
RPUSD2-202ENST00000559271 UNC13AQ9UPW8 1703 aa36.13■■■■□ 3.37
RPUSD2-202ENST00000559271 PABPN1Q86U42 306 aaKnown RBP eCLIP35.78■■■■□ 3.32
RPUSD2-202ENST00000559271 BICRAQ9NZM4 1560 aa35.77■■■■□ 3.32
RPUSD2-202ENST00000559271 CECR2Q9BXF3 1484 aa35.25■■■■□ 3.23
RPUSD2-202ENST00000559271 DNAJC5BQ9UF47 199 aa35.19■■■■□ 3.22
RPUSD2-202ENST00000559271 BAZ1AQ9NRL2 1556 aaPredicted RBP35.13■■■■□ 3.21
RPUSD2-202ENST00000559271 SUPT5HO00267 1087 aaKnown RBP35.09■■■■□ 3.21
RPUSD2-202ENST00000559271 RSF1Q96T23 1441 aaPredicted RBP35.06■■■■□ 3.2
RPUSD2-202ENST00000559271 MROH2BQ7Z745 1585 aa35.05■■■■□ 3.2
RPUSD2-202ENST00000559271 SMARCA4P51532 1647 aa35.01■■■■□ 3.2
RPUSD2-202ENST00000559271 WIZO95785 1651 aa34.75■■■■□ 3.15
RPUSD2-202ENST00000559271 EIF4G1Q04637 1599 aaKnown RBP34.75■■■■□ 3.15
RPUSD2-202ENST00000559271 CC2D2AQ9P2K1 1620 aa34.63■■■■□ 3.13
RPUSD2-202ENST00000559271 PEG3Q9GZU2 1588 aa34.63■■■■□ 3.13
RPUSD2-202ENST00000559271 SMARCA2P51531 1590 aa34.5■■■■□ 3.11
RPUSD2-202ENST00000559271 ATAD2BQ9ULI0 1458 aa34.48■■■■□ 3.11
RPUSD2-202ENST00000559271 TOP2AP11388 1531 aaKnown RBP34.44■■■■□ 3.1
RPUSD2-202ENST00000559271 BAZ1BQ9UIG0 1483 aaKnown RBP34.29■■■■□ 3.08
RPUSD2-202ENST00000559271 NCAPD3P42695 1498 aa34.25■■■■□ 3.07
RPUSD2-202ENST00000559271 HMGXB3Q12766 1538 aa34.24■■■■□ 3.07
RPUSD2-202ENST00000559271 CCDC88BA6NC98 1476 aa34.01■■■■□ 3.03
RPUSD2-202ENST00000559271 CHIC1Q5VXU3 224 aa33.45■■■□□ 2.95
RPUSD2-202ENST00000559271 CFTRP13569 1480 aa33.4■■■□□ 2.94
RPUSD2-202ENST00000559271 CADPSQ9ULU8 1353 aa33.32■■■□□ 2.92
RPUSD2-202ENST00000559271 PRDM2Q13029 1718 aa33.29■■■□□ 2.92
RPUSD2-202ENST00000559271 LAMC3Q9Y6N6 1575 aa33.19■■■□□ 2.9
RPUSD2-202ENST00000559271 ABCC8Q09428 1581 aa33.18■■■□□ 2.9
RPUSD2-202ENST00000559271 NESP48681 1621 aa33.14■■■□□ 2.9
RPUSD2-202ENST00000559271 TRIM41Q8WV44 630 aa33.06■■■□□ 2.88
RPUSD2-202ENST00000559271 WRNQ14191 1432 aaPredicted RBP eCLIP33.04■■■□□ 2.88
RPUSD2-202ENST00000559271 FANCD2Q9BXW9 1451 aa32.98■■■□□ 2.87
RPUSD2-202ENST00000559271 ERCC6Q03468 1493 aa32.96■■■□□ 2.87
RPUSD2-202ENST00000559271 SYNJ1O43426 1573 aa32.93■■■□□ 2.86
RPUSD2-202ENST00000559271 PDS5BQ9NTI5 1447 aa32.9■■■□□ 2.86
RPUSD2-202ENST00000559271 TOP2BQ02880 1626 aa32.85■■■□□ 2.85
RPUSD2-202ENST00000559271 BIVM-ERCC5R4GMW8 1640 aa32.84■■■□□ 2.85
RPUSD2-202ENST00000559271 CEP164Q9UPV0 1460 aa32.83■■■□□ 2.85
RPUSD2-202ENST00000559271 CUX1P39880 1505 aa32.81■■■□□ 2.84
RPUSD2-202ENST00000559271 KIF21AQ7Z4S6 1674 aa32.78■■■□□ 2.84
RPUSD2-202ENST00000559271 DNMBPQ6XZF7 1577 aa32.67■■■□□ 2.82
RPUSD2-202ENST00000559271 THOC2Q8NI27 1593 aaKnown RBP32.62■■■□□ 2.81
RPUSD2-202ENST00000559271 TOPBP1Q92547 1522 aa32.59■■■□□ 2.81
RPUSD2-202ENST00000559271 CUX2O14529 1486 aa32.59■■■□□ 2.81
RPUSD2-202ENST00000559271 URB2Q14146 1524 aaKnown RBP32.58■■■□□ 2.81
RPUSD2-202ENST00000559271 MRC2Q9UBG0 1479 aa32.52■■■□□ 2.8
RPUSD2-202ENST00000559271 FGD5Q6ZNL6 1462 aa32.51■■■□□ 2.79
RPUSD2-202ENST00000559271 SOGA1O94964 1423 aa32.46■■■□□ 2.79
RPUSD2-202ENST00000559271 EEA1Q15075 1411 aa32.44■■■□□ 2.78
RPUSD2-202ENST00000559271 POLA1P09884 1462 aaPredicted RBP32.4■■■□□ 2.78
RPUSD2-202ENST00000559271 FAM9AQ8IZU1 332 aaPredicted RBP32.39■■■□□ 2.78
RPUSD2-202ENST00000559271 WDR62O43379 1518 aa32.38■■■□□ 2.77
RPUSD2-202ENST00000559271 RUSC2Q8N2Y8 1516 aa32.34■■■□□ 2.77
RPUSD2-202ENST00000559271 KIF27Q86VH2 1401 aa32.24■■■□□ 2.75
RPUSD2-202ENST00000559271 RAD54L2Q9Y4B4 1467 aa32.24■■■□□ 2.75
RPUSD2-202ENST00000559271 ABCA10Q8WWZ4 1543 aa32.23■■■□□ 2.75
RPUSD2-202ENST00000559271 WDR97A6NE52 1622 aa32.21■■■□□ 2.75
RPUSD2-202ENST00000559271 CSRNP3Q8WYN3 585 aa32.17■■■□□ 2.74
RPUSD2-202ENST00000559271 TARBP1Q13395 1621 aaKnown RBP32.15■■■□□ 2.74
RPUSD2-202ENST00000559271 LOC105371045A0A1W2PR82 267 aa32.08■■■□□ 2.73
RPUSD2-202ENST00000559271 IFT140Q96RY7 1462 aa32.07■■■□□ 2.72
RPUSD2-202ENST00000559271 KIF21BO75037 1637 aa32.04■■■□□ 2.72
RPUSD2-202ENST00000559271 ABCA5Q8WWZ7 1642 aa32.03■■■□□ 2.72
RPUSD2-202ENST00000559271 GOLGA3Q08378 1498 aa31.95■■■□□ 2.71
RPUSD2-202ENST00000559271 PRXQ9BXM0 1461 aa31.94■■■□□ 2.7
RPUSD2-202ENST00000559271 TDRD9Q8NDG6 1382 aaKnown RBP31.93■■■□□ 2.7
RPUSD2-202ENST00000559271 IGF1RP08069 1367 aa31.93■■■□□ 2.7
RPUSD2-202ENST00000559271 GAPVD1Q14C86 1478 aa31.92■■■□□ 2.7
RPUSD2-202ENST00000559271 ERICH3Q5RHP9 1530 aa31.9■■■□□ 2.7
RPUSD2-202ENST00000559271 EHMT2Q96KQ7 1210 aa31.9■■■□□ 2.7
RPUSD2-202ENST00000559271 RAPGEF2Q9Y4G8 1499 aa31.85■■■□□ 2.69
RPUSD2-202ENST00000559271 CUL7Q14999 1698 aa31.85■■■□□ 2.69
RPUSD2-202ENST00000559271 ZNF608Q9ULD9 1512 aaPredicted RBP31.84■■■□□ 2.69
RPUSD2-202ENST00000559271 PBRM1Q86U86 1689 aa31.83■■■□□ 2.69
RPUSD2-202ENST00000559271 EIF4G3O43432 1585 aaKnown RBP31.81■■■□□ 2.68
RPUSD2-202ENST00000559271 AQRO60306 1485 aaKnown RBP eCLIP31.8■■■□□ 2.68
RPUSD2-202ENST00000559271 CARMIL1Q5VZK9 1371 aa31.78■■■□□ 2.68
RPUSD2-202ENST00000559271 GRIN2BQ13224 1484 aa31.75■■■□□ 2.67
RPUSD2-202ENST00000559271 TNIKQ9UKE5 1360 aa31.75■■■□□ 2.67
RPUSD2-202ENST00000559271 UBTFP17480 764 aaKnown RBP31.7■■■□□ 2.67
RPUSD2-202ENST00000559271 DNAJC5Q9H3Z4 198 aa31.65■■■□□ 2.66
RPUSD2-202ENST00000559271 ADAMTS12P58397 1594 aa31.65■■■□□ 2.66
RPUSD2-202ENST00000559271 FHAD1B1AJZ9 1412 aa31.59■■■□□ 2.65
RPUSD2-202ENST00000559271 SNAPC4Q5SXM2 1469 aa31.57■■■□□ 2.64
RPUSD2-202ENST00000559271 CEP162Q5TB80 1403 aa31.56■■■□□ 2.64
RPUSD2-202ENST00000559271 MAGI1Q96QZ7 1491 aaPredicted RBP31.54■■■□□ 2.64
RPUSD2-202ENST00000559271 CTTNBP2Q8WZ74 1663 aa31.43■■■□□ 2.62
RPUSD2-202ENST00000559271 SYNJ2O15056 1496 aa31.41■■■□□ 2.62
RPUSD2-202ENST00000559271 CLIP1P30622 1438 aa31.39■■■□□ 2.62
RPUSD2-202ENST00000559271 GRIN2AQ12879 1464 aa31.36■■■□□ 2.61
Retrieved 100 of 20,778 RNA–protein pairs in 102.1 ms