RNA–Protein interactions for RNA: ENST00000354608.9

PTGER3-203, Transcript of prostaglandin E receptor 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PTGER3, Length 1,470 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTGER3-203ENST00000354608 NISCHQ9Y2I1 1504 aa48.56■■■■■ 5.36
PTGER3-203ENST00000354608 CCDC180Q9P1Z9 1646 aa43.2■■■■■ 4.51
PTGER3-203ENST00000354608 ABCC9O60706 1549 aa42.33■■■■■ 4.37
PTGER3-203ENST00000354608 RB1CC1Q8TDY2 1594 aa40.68■■■■■ 4.1
PTGER3-203ENST00000354608 DCAF8L2P0C7V8 631 aa40.64■■■■■ 4.1
PTGER3-203ENST00000354608 NACADO15069 1562 aa40.63■■■■■ 4.09
PTGER3-203ENST00000354608 ZCCHC6Q5VYS8 1495 aaKnown RBP40.43■■■■■ 4.06
PTGER3-203ENST00000354608 MYO15BQ96JP2 1530 aa40.35■■■■■ 4.05
PTGER3-203ENST00000354608 DCAF1Q9Y4B6 1507 aa40.16■■■■■ 4.02
PTGER3-203ENST00000354608 UNC13AQ9UPW8 1703 aa39.8■■■■□ 3.96
PTGER3-203ENST00000354608 PABPN1Q86U42 306 aaKnown RBP eCLIP39.56■■■■□ 3.92
PTGER3-203ENST00000354608 BICRAQ9NZM4 1560 aa39.46■■■■□ 3.91
PTGER3-203ENST00000354608 SCRIBQ14160 1630 aa39.42■■■■□ 3.9
PTGER3-203ENST00000354608 SHROOM4Q9ULL8 1493 aa39■■■■□ 3.83
PTGER3-203ENST00000354608 DNAJC5BQ9UF47 199 aa38.9■■■■□ 3.82
PTGER3-203ENST00000354608 EIF4G1Q04637 1599 aaKnown RBP38.42■■■■□ 3.74
PTGER3-203ENST00000354608 CC2D2AQ9P2K1 1620 aa38.29■■■■□ 3.72
PTGER3-203ENST00000354608 CECR2Q9BXF3 1484 aa38.03■■■■□ 3.68
PTGER3-203ENST00000354608 SMARCA4P51532 1647 aa37.7■■■■□ 3.63
PTGER3-203ENST00000354608 BAZ1AQ9NRL2 1556 aaPredicted RBP37.64■■■■□ 3.62
PTGER3-203ENST00000354608 ATAD2BQ9ULI0 1458 aa37.49■■■■□ 3.59
PTGER3-203ENST00000354608 NCAPD3P42695 1498 aa37.48■■■■□ 3.59
PTGER3-203ENST00000354608 SMARCA2P51531 1590 aa37.45■■■■□ 3.59
PTGER3-203ENST00000354608 MROH2BQ7Z745 1585 aa37.42■■■■□ 3.58
PTGER3-203ENST00000354608 PEG3Q9GZU2 1588 aa37.32■■■■□ 3.56
PTGER3-203ENST00000354608 HMGXB3Q12766 1538 aa37.28■■■■□ 3.56
PTGER3-203ENST00000354608 BAZ1BQ9UIG0 1483 aaKnown RBP37.19■■■■□ 3.54
PTGER3-203ENST00000354608 WIZO95785 1651 aa37.04■■■■□ 3.52
PTGER3-203ENST00000354608 RSF1Q96T23 1441 aaPredicted RBP36.98■■■■□ 3.51
PTGER3-203ENST00000354608 TOP2AP11388 1531 aaKnown RBP36.62■■■■□ 3.45
PTGER3-203ENST00000354608 NESP48681 1621 aa36.61■■■■□ 3.45
PTGER3-203ENST00000354608 LAMC3Q9Y6N6 1575 aa36.51■■■■□ 3.44
PTGER3-203ENST00000354608 ERCC6Q03468 1493 aa36.48■■■■□ 3.43
PTGER3-203ENST00000354608 CADPSQ9ULU8 1353 aa36.39■■■■□ 3.42
PTGER3-203ENST00000354608 PDS5BQ9NTI5 1447 aa36.27■■■■□ 3.4
PTGER3-203ENST00000354608 CCDC88BA6NC98 1476 aa36.2■■■■□ 3.39
PTGER3-203ENST00000354608 KIF21AQ7Z4S6 1674 aa36.2■■■■□ 3.38
PTGER3-203ENST00000354608 CFTRP13569 1480 aa36.16■■■■□ 3.38
PTGER3-203ENST00000354608 CUX2O14529 1486 aa36.1■■■■□ 3.37
PTGER3-203ENST00000354608 THOC2Q8NI27 1593 aaKnown RBP36.06■■■■□ 3.36
PTGER3-203ENST00000354608 SUPT5HO00267 1087 aaKnown RBP36.03■■■■□ 3.36
PTGER3-203ENST00000354608 FANCD2Q9BXW9 1451 aa35.98■■■■□ 3.35
PTGER3-203ENST00000354608 CEP164Q9UPV0 1460 aa35.93■■■■□ 3.34
PTGER3-203ENST00000354608 PRDM2Q13029 1718 aa35.91■■■■□ 3.34
PTGER3-203ENST00000354608 MRC2Q9UBG0 1479 aa35.89■■■■□ 3.34
PTGER3-203ENST00000354608 WDR62O43379 1518 aa35.77■■■■□ 3.32
PTGER3-203ENST00000354608 URB2Q14146 1524 aaKnown RBP35.62■■■■□ 3.29
PTGER3-203ENST00000354608 TOPBP1Q92547 1522 aa35.4■■■■□ 3.26
PTGER3-203ENST00000354608 ABCC8Q09428 1581 aa35.39■■■■□ 3.26
PTGER3-203ENST00000354608 DNMBPQ6XZF7 1577 aa35.34■■■■□ 3.25
PTGER3-203ENST00000354608 IFT140Q96RY7 1462 aa35.18■■■■□ 3.22
PTGER3-203ENST00000354608 CUX1P39880 1505 aa35.11■■■■□ 3.21
PTGER3-203ENST00000354608 POLA1P09884 1462 aaPredicted RBP35.1■■■■□ 3.21
PTGER3-203ENST00000354608 DNAJC5Q9H3Z4 198 aa35.08■■■■□ 3.21
PTGER3-203ENST00000354608 ZNF608Q9ULD9 1512 aaPredicted RBP35.03■■■■□ 3.2
PTGER3-203ENST00000354608 TARBP1Q13395 1621 aaKnown RBP35.02■■■■□ 3.2
PTGER3-203ENST00000354608 FGD5Q6ZNL6 1462 aa35.01■■■■□ 3.19
PTGER3-203ENST00000354608 RAD54L2Q9Y4B4 1467 aa34.95■■■■□ 3.19
PTGER3-203ENST00000354608 SOGA1O94964 1423 aa34.95■■■■□ 3.19
PTGER3-203ENST00000354608 EIF4G3O43432 1585 aaKnown RBP34.9■■■■□ 3.18
PTGER3-203ENST00000354608 WRNQ14191 1432 aaPredicted RBP eCLIP34.87■■■■□ 3.17
PTGER3-203ENST00000354608 AQRO60306 1485 aaKnown RBP eCLIP34.84■■■■□ 3.17
PTGER3-203ENST00000354608 TOP2BQ02880 1626 aa34.8■■■■□ 3.16
PTGER3-203ENST00000354608 BIVM-ERCC5R4GMW8 1640 aa34.8■■■■□ 3.16
PTGER3-203ENST00000354608 SYNJ1O43426 1573 aa34.79■■■■□ 3.16
PTGER3-203ENST00000354608 TDRD9Q8NDG6 1382 aaKnown RBP34.76■■■■□ 3.16
PTGER3-203ENST00000354608 WDR97A6NE52 1622 aa34.73■■■■□ 3.15
PTGER3-203ENST00000354608 ABCA10Q8WWZ4 1543 aa34.65■■■■□ 3.14
PTGER3-203ENST00000354608 OSCARQ8IYS5 282 aa34.63■■■■□ 3.13
PTGER3-203ENST00000354608 GAPVD1Q14C86 1478 aa34.55■■■■□ 3.12
PTGER3-203ENST00000354608 GRIN2BQ13224 1484 aa34.54■■■■□ 3.12
PTGER3-203ENST00000354608 ABCA5Q8WWZ7 1642 aa34.52■■■■□ 3.12
PTGER3-203ENST00000354608 SNAPC4Q5SXM2 1469 aa34.51■■■■□ 3.11
PTGER3-203ENST00000354608 PBRM1Q86U86 1689 aa34.49■■■■□ 3.11
PTGER3-203ENST00000354608 CHD1O14646 1710 aa34.49■■■■□ 3.11
PTGER3-203ENST00000354608 MAGI1Q96QZ7 1491 aaPredicted RBP34.45■■■■□ 3.11
PTGER3-203ENST00000354608 FBLN2P98095 1184 aa34.45■■■■□ 3.1
PTGER3-203ENST00000354608 CHMP7Q8WUX9 453 aaPredicted RBP34.33■■■■□ 3.09
PTGER3-203ENST00000354608 SYNJ2O15056 1496 aa34.32■■■■□ 3.08
PTGER3-203ENST00000354608 ERICH3Q5RHP9 1530 aa34.24■■■■□ 3.07
PTGER3-203ENST00000354608 ADAMTS12P58397 1594 aa34.19■■■■□ 3.06
PTGER3-203ENST00000354608 KIF27Q86VH2 1401 aa34.15■■■■□ 3.06
PTGER3-203ENST00000354608 FHAD1B1AJZ9 1412 aa34.14■■■■□ 3.06
PTGER3-203ENST00000354608 GRIN2AQ12879 1464 aa34.1■■■■□ 3.05
PTGER3-203ENST00000354608 CLASP1Q7Z460 1538 aa34.08■■■■□ 3.05
PTGER3-203ENST00000354608 RIMBP3CA6NJZ7 1639 aa34.07■■■■□ 3.05
PTGER3-203ENST00000354608 RIMBP3BA6NNM3 1639 aa34.07■■■■□ 3.05
PTGER3-203ENST00000354608 RIMBP3Q9UFD9 1639 aa34.07■■■■□ 3.05
PTGER3-203ENST00000354608 ARHGEF11O15085 1522 aa34.05■■■■□ 3.04
PTGER3-203ENST00000354608 TRIM41Q8WV44 630 aa34.03■■■■□ 3.04
PTGER3-203ENST00000354608 IGF1RP08069 1367 aa34.02■■■■□ 3.04
PTGER3-203ENST00000354608 NUP160Q12769 1436 aa33.95■■■■□ 3.02
PTGER3-203ENST00000354608 CEP170Q5SW79 1584 aa33.94■■■■□ 3.02
PTGER3-203ENST00000354608 CUL7Q14999 1698 aa33.93■■■■□ 3.02
PTGER3-203ENST00000354608 RUSC2Q8N2Y8 1516 aa33.83■■■■□ 3.01
PTGER3-203ENST00000354608 CARMIL1Q5VZK9 1371 aa33.82■■■■□ 3
PTGER3-203ENST00000354608 ARAP1Q96P48 1450 aa33.77■■■■□ 3
PTGER3-203ENST00000354608 CYB5RLQ6IPT4 315 aa33.76■■■■□ 3
PTGER3-203ENST00000354608 SHROOM2Q13796 1616 aa33.7■■■□□ 2.99
PTGER3-203ENST00000354608 ERCC6L2Q5T890 1561 aa33.63■■■□□ 2.97
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms