RNA–Protein interactions for RNA: ENST00000617769.1

PCDHA13-203, Transcript of protocadherin alpha 13, humanhuman

APPRIS ALT2 BASIC

Gene PCDHA13, Length 2,427 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA13-203ENST00000617769 NISCHQ9Y2I1 1504 aa42.47■■■■■ 4.39
PCDHA13-203ENST00000617769 CCDC180Q9P1Z9 1646 aa36.36■■■■□ 3.41
PCDHA13-203ENST00000617769 SHROOM4Q9ULL8 1493 aa35.83■■■■□ 3.33
PCDHA13-203ENST00000617769 ZCCHC6Q5VYS8 1495 aaKnown RBP35.77■■■■□ 3.32
PCDHA13-203ENST00000617769 DCAF8L2P0C7V8 631 aa35.55■■■■□ 3.28
PCDHA13-203ENST00000617769 SUPT5HO00267 1087 aaKnown RBP34.81■■■■□ 3.16
PCDHA13-203ENST00000617769 DCAF1Q9Y4B6 1507 aa34.79■■■■□ 3.16
PCDHA13-203ENST00000617769 ABCC9O60706 1549 aa34.39■■■■□ 3.1
PCDHA13-203ENST00000617769 SCRIBQ14160 1630 aa34.06■■■■□ 3.04
PCDHA13-203ENST00000617769 MYO15BQ96JP2 1530 aa34.02■■■■□ 3.04
PCDHA13-203ENST00000617769 NACADO15069 1562 aa33.8■■■■□ 3
PCDHA13-203ENST00000617769 CHIC1Q5VXU3 224 aa33.62■■■□□ 2.97
PCDHA13-203ENST00000617769 RB1CC1Q8TDY2 1594 aa33.42■■■□□ 2.94
PCDHA13-203ENST00000617769 RSF1Q96T23 1441 aaPredicted RBP33.37■■■□□ 2.93
PCDHA13-203ENST00000617769 CECR2Q9BXF3 1484 aa33.23■■■□□ 2.91
PCDHA13-203ENST00000617769 MROH2BQ7Z745 1585 aa33.02■■■□□ 2.88
PCDHA13-203ENST00000617769 UNC13AQ9UPW8 1703 aa32.9■■■□□ 2.86
PCDHA13-203ENST00000617769 PABPN1Q86U42 306 aaKnown RBP eCLIP32.81■■■□□ 2.84
PCDHA13-203ENST00000617769 WIZO95785 1651 aa32.8■■■□□ 2.84
PCDHA13-203ENST00000617769 HRCP23327 699 aa32.72■■■□□ 2.83
PCDHA13-203ENST00000617769 PCGF6Q9BYE7 350 aa32.69■■■□□ 2.82
PCDHA13-203ENST00000617769 LOC105371045A0A1W2PR82 267 aa32.66■■■□□ 2.82
PCDHA13-203ENST00000617769 BAZ1AQ9NRL2 1556 aaPredicted RBP32.65■■■□□ 2.82
PCDHA13-203ENST00000617769 BICRAQ9NZM4 1560 aa32.55■■■□□ 2.8
PCDHA13-203ENST00000617769 SMARCA4P51532 1647 aa32.47■■■□□ 2.79
PCDHA13-203ENST00000617769 TRIM41Q8WV44 630 aa32.44■■■□□ 2.78
PCDHA13-203ENST00000617769 TOP2AP11388 1531 aaKnown RBP32.23■■■□□ 2.75
PCDHA13-203ENST00000617769 FAM9AQ8IZU1 332 aaPredicted RBP32.21■■■□□ 2.75
PCDHA13-203ENST00000617769 CCDC88BA6NC98 1476 aa32.13■■■□□ 2.73
PCDHA13-203ENST00000617769 PPARGC1BQ86YN6 1023 aaKnown RBP32.07■■■□□ 2.72
PCDHA13-203ENST00000617769 SMARCA2P51531 1590 aa32.05■■■□□ 2.72
PCDHA13-203ENST00000617769 TRIM26Q12899 539 aaPredicted RBP32.02■■■□□ 2.72
PCDHA13-203ENST00000617769 EHMT2Q96KQ7 1210 aa32.01■■■□□ 2.71
PCDHA13-203ENST00000617769 EIF4G1Q04637 1599 aaKnown RBP31.99■■■□□ 2.71
PCDHA13-203ENST00000617769 PEG3Q9GZU2 1588 aa31.85■■■□□ 2.69
PCDHA13-203ENST00000617769 ABCC8Q09428 1581 aa31.84■■■□□ 2.69
PCDHA13-203ENST00000617769 ATAD2BQ9ULI0 1458 aa31.83■■■□□ 2.69
PCDHA13-203ENST00000617769 BAZ1BQ9UIG0 1483 aaKnown RBP31.71■■■□□ 2.67
PCDHA13-203ENST00000617769 SOGA1O94964 1423 aa31.42■■■□□ 2.62
PCDHA13-203ENST00000617769 WRNQ14191 1432 aaPredicted RBP eCLIP31.36■■■□□ 2.61
PCDHA13-203ENST00000617769 RUSC2Q8N2Y8 1516 aa31.32■■■□□ 2.6
PCDHA13-203ENST00000617769 ZEB1P37275 1124 aaPredicted RBP31.32■■■□□ 2.6
PCDHA13-203ENST00000617769 NCAPD3P42695 1498 aa31.31■■■□□ 2.6
PCDHA13-203ENST00000617769 SYNJ1O43426 1573 aa31.23■■■□□ 2.59
PCDHA13-203ENST00000617769 HMGXB3Q12766 1538 aa31.21■■■□□ 2.59
PCDHA13-203ENST00000617769 CSRNP3Q8WYN3 585 aa31.17■■■□□ 2.58
PCDHA13-203ENST00000617769 EEA1Q15075 1411 aa31.03■■■□□ 2.56
PCDHA13-203ENST00000617769 UBTFP17480 764 aaKnown RBP31.02■■■□□ 2.56
PCDHA13-203ENST00000617769 CC2D2AQ9P2K1 1620 aa30.92■■■□□ 2.54
PCDHA13-203ENST00000617769 CEP162Q5TB80 1403 aa30.91■■■□□ 2.54
PCDHA13-203ENST00000617769 TNIKQ9UKE5 1360 aa30.89■■■□□ 2.54
PCDHA13-203ENST00000617769 CFTRP13569 1480 aa30.88■■■□□ 2.53
PCDHA13-203ENST00000617769 TOP2BQ02880 1626 aa30.87■■■□□ 2.53
PCDHA13-203ENST00000617769 GOLGA3Q08378 1498 aa30.84■■■□□ 2.53
PCDHA13-203ENST00000617769 TTBK1Q5TCY1 1321 aaPredicted RBP30.77■■■□□ 2.52
PCDHA13-203ENST00000617769 CUX1P39880 1505 aa30.77■■■□□ 2.52
PCDHA13-203ENST00000617769 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP30.76■■■□□ 2.51
PCDHA13-203ENST00000617769 BIVM-ERCC5R4GMW8 1640 aa30.75■■■□□ 2.51
PCDHA13-203ENST00000617769 CEP164Q9UPV0 1460 aa30.73■■■□□ 2.51
PCDHA13-203ENST00000617769 CADPSQ9ULU8 1353 aa30.7■■■□□ 2.5
PCDHA13-203ENST00000617769 RAPGEF2Q9Y4G8 1499 aa30.67■■■□□ 2.5
PCDHA13-203ENST00000617769 RANGAP1P46060 587 aaPredicted RBP30.67■■■□□ 2.5
PCDHA13-203ENST00000617769 CCER1Q8TC90 406 aaPredicted RBP30.66■■■□□ 2.5
PCDHA13-203ENST00000617769 KIF21BO75037 1637 aa30.65■■■□□ 2.5
PCDHA13-203ENST00000617769 PRDM2Q13029 1718 aa30.5■■■□□ 2.47
PCDHA13-203ENST00000617769 CLIP1P30622 1438 aa30.49■■■□□ 2.47
PCDHA13-203ENST00000617769 DNAJC5BQ9UF47 199 aa30.47■■■□□ 2.47
PCDHA13-203ENST00000617769 NESP48681 1621 aa30.45■■■□□ 2.46
PCDHA13-203ENST00000617769 KIF27Q86VH2 1401 aa30.45■■■□□ 2.46
PCDHA13-203ENST00000617769 PRXQ9BXM0 1461 aa30.4■■■□□ 2.46
PCDHA13-203ENST00000617769 FANCD2Q9BXW9 1451 aa30.4■■■□□ 2.46
PCDHA13-203ENST00000617769 FGD5Q6ZNL6 1462 aa30.34■■■□□ 2.45
PCDHA13-203ENST00000617769 CUX2O14529 1486 aa30.33■■■□□ 2.45
PCDHA13-203ENST00000617769 ERICH3Q5RHP9 1530 aa30.28■■■□□ 2.44
PCDHA13-203ENST00000617769 VPS8Q8N3P4 1428 aa30.24■■■□□ 2.43
PCDHA13-203ENST00000617769 IGF1RP08069 1367 aa30.21■■■□□ 2.43
PCDHA13-203ENST00000617769 SCAF1Q9H7N4 1312 aaKnown RBP30.21■■■□□ 2.43
PCDHA13-203ENST00000617769 RAD54L2Q9Y4B4 1467 aa30.15■■■□□ 2.42
PCDHA13-203ENST00000617769 APLP2Q06481 763 aa30.12■■■□□ 2.41
PCDHA13-203ENST00000617769 TOPBP1Q92547 1522 aa30.12■■■□□ 2.41
PCDHA13-203ENST00000617769 DIEXFQ68CQ4 756 aaKnown RBP30.11■■■□□ 2.41
PCDHA13-203ENST00000617769 DNMBPQ6XZF7 1577 aa30.1■■■□□ 2.41
PCDHA13-203ENST00000617769 ARAP1Q96P48 1450 aa30.07■■■□□ 2.4
PCDHA13-203ENST00000617769 CARMIL1Q5VZK9 1371 aa30.07■■■□□ 2.4
PCDHA13-203ENST00000617769 POLA1P09884 1462 aaPredicted RBP30.06■■■□□ 2.4
PCDHA13-203ENST00000617769 LAMC3Q9Y6N6 1575 aa30.06■■■□□ 2.4
PCDHA13-203ENST00000617769 HNRNPUL2Q1KMD3 747 aaKnown RBP30.01■■■□□ 2.39
PCDHA13-203ENST00000617769 URB2Q14146 1524 aaKnown RBP30■■■□□ 2.39
PCDHA13-203ENST00000617769 ARHGAP35Q9NRY4 1499 aa29.94■■■□□ 2.38
PCDHA13-203ENST00000617769 PDS5BQ9NTI5 1447 aa29.93■■■□□ 2.38
PCDHA13-203ENST00000617769 ABCA10Q8WWZ4 1543 aa29.93■■■□□ 2.38
PCDHA13-203ENST00000617769 ACIN1Q9UKV3 1341 aaKnown RBP29.9■■■□□ 2.38
PCDHA13-203ENST00000617769 KANK4Q5T7N3 995 aaPredicted RBP29.9■■■□□ 2.38
PCDHA13-203ENST00000617769 NEUROD1Q13562 356 aa29.87■■■□□ 2.37
PCDHA13-203ENST00000617769 TDRD9Q8NDG6 1382 aaKnown RBP29.85■■■□□ 2.37
PCDHA13-203ENST00000617769 ZNF316A6NFI3 1004 aaPredicted RBP29.85■■■□□ 2.37
PCDHA13-203ENST00000617769 KIF21AQ7Z4S6 1674 aa29.85■■■□□ 2.37
PCDHA13-203ENST00000617769 P3H3Q8IVL6 736 aa29.82■■■□□ 2.36
PCDHA13-203ENST00000617769 CENPBP07199 599 aaPredicted RBP29.7■■■□□ 2.34
PCDHA13-203ENST00000617769 WDR97A6NE52 1622 aa29.67■■■□□ 2.34
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms