RNA–Protein interactions for RNA: ENST00000344550.4

CEACAM3-201, Transcript of carcinoembryonic antigen related cell adhesion molecule 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CEACAM3, Length 1,022 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM3-201ENST00000344550 NISCHQ9Y2I1 1504 aa49.37■■■■■ 5.49
CEACAM3-201ENST00000344550 CCDC180Q9P1Z9 1646 aa44.1■■■■■ 4.65
CEACAM3-201ENST00000344550 ABCC9O60706 1549 aa43.42■■■■■ 4.54
CEACAM3-201ENST00000344550 RB1CC1Q8TDY2 1594 aa41.72■■■■■ 4.27
CEACAM3-201ENST00000344550 NACADO15069 1562 aa41.62■■■■■ 4.25
CEACAM3-201ENST00000344550 MYO15BQ96JP2 1530 aa41.34■■■■■ 4.21
CEACAM3-201ENST00000344550 DCAF8L2P0C7V8 631 aa41.28■■■■■ 4.2
CEACAM3-201ENST00000344550 ZCCHC6Q5VYS8 1495 aaKnown RBP41.02■■■■■ 4.16
CEACAM3-201ENST00000344550 DCAF1Q9Y4B6 1507 aa40.95■■■■■ 4.15
CEACAM3-201ENST00000344550 UNC13AQ9UPW8 1703 aa40.59■■■■■ 4.09
CEACAM3-201ENST00000344550 PABPN1Q86U42 306 aaKnown RBP eCLIP40.49■■■■■ 4.07
CEACAM3-201ENST00000344550 BICRAQ9NZM4 1560 aa40.39■■■■■ 4.06
CEACAM3-201ENST00000344550 DNAJC5BQ9UF47 199 aa40.25■■■■■ 4.03
CEACAM3-201ENST00000344550 SHROOM4Q9ULL8 1493 aa40.18■■■■■ 4.02
CEACAM3-201ENST00000344550 SCRIBQ14160 1630 aa40.03■■■■■ 4
CEACAM3-201ENST00000344550 EIF4G1Q04637 1599 aaKnown RBP39.38■■■■□ 3.9
CEACAM3-201ENST00000344550 CC2D2AQ9P2K1 1620 aa39.3■■■■□ 3.88
CEACAM3-201ENST00000344550 CECR2Q9BXF3 1484 aa39.15■■■■□ 3.86
CEACAM3-201ENST00000344550 NCAPD3P42695 1498 aa38.42■■■■□ 3.74
CEACAM3-201ENST00000344550 SMARCA4P51532 1647 aa38.34■■■■□ 3.73
CEACAM3-201ENST00000344550 BAZ1AQ9NRL2 1556 aaPredicted RBP38.32■■■■□ 3.73
CEACAM3-201ENST00000344550 ATAD2BQ9ULI0 1458 aa38.3■■■■□ 3.72
CEACAM3-201ENST00000344550 SMARCA2P51531 1590 aa38.28■■■■□ 3.72
CEACAM3-201ENST00000344550 HMGXB3Q12766 1538 aa38.16■■■■□ 3.7
CEACAM3-201ENST00000344550 PEG3Q9GZU2 1588 aa38.1■■■■□ 3.69
CEACAM3-201ENST00000344550 MROH2BQ7Z745 1585 aa37.95■■■■□ 3.67
CEACAM3-201ENST00000344550 BAZ1BQ9UIG0 1483 aaKnown RBP37.94■■■■□ 3.66
CEACAM3-201ENST00000344550 ERCC6Q03468 1493 aa37.53■■■■□ 3.6
CEACAM3-201ENST00000344550 WIZO95785 1651 aa37.47■■■■□ 3.59
CEACAM3-201ENST00000344550 LAMC3Q9Y6N6 1575 aa37.44■■■■□ 3.58
CEACAM3-201ENST00000344550 RSF1Q96T23 1441 aaPredicted RBP37.43■■■■□ 3.58
CEACAM3-201ENST00000344550 NESP48681 1621 aa37.42■■■■□ 3.58
CEACAM3-201ENST00000344550 CUX2O14529 1486 aa37.39■■■■□ 3.58
CEACAM3-201ENST00000344550 CADPSQ9ULU8 1353 aa37.25■■■■□ 3.55
CEACAM3-201ENST00000344550 PDS5BQ9NTI5 1447 aa37.24■■■■□ 3.55
CEACAM3-201ENST00000344550 TOP2AP11388 1531 aaKnown RBP37.15■■■■□ 3.54
CEACAM3-201ENST00000344550 THOC2Q8NI27 1593 aaKnown RBP37■■■■□ 3.51
CEACAM3-201ENST00000344550 KIF21AQ7Z4S6 1674 aa36.96■■■■□ 3.51
CEACAM3-201ENST00000344550 CFTRP13569 1480 aa36.94■■■■□ 3.5
CEACAM3-201ENST00000344550 MRC2Q9UBG0 1479 aa36.81■■■■□ 3.48
CEACAM3-201ENST00000344550 CEP164Q9UPV0 1460 aa36.76■■■■□ 3.48
CEACAM3-201ENST00000344550 FANCD2Q9BXW9 1451 aa36.75■■■■□ 3.47
CEACAM3-201ENST00000344550 DNAJC5Q9H3Z4 198 aa36.75■■■■□ 3.47
CEACAM3-201ENST00000344550 WDR62O43379 1518 aa36.7■■■■□ 3.47
CEACAM3-201ENST00000344550 CCDC88BA6NC98 1476 aa36.7■■■■□ 3.47
CEACAM3-201ENST00000344550 PRDM2Q13029 1718 aa36.52■■■■□ 3.44
CEACAM3-201ENST00000344550 URB2Q14146 1524 aaKnown RBP36.38■■■■□ 3.41
CEACAM3-201ENST00000344550 ABCC8Q09428 1581 aa36.24■■■■□ 3.39
CEACAM3-201ENST00000344550 TOPBP1Q92547 1522 aa36.11■■■■□ 3.37
CEACAM3-201ENST00000344550 IFT140Q96RY7 1462 aa36.05■■■■□ 3.36
CEACAM3-201ENST00000344550 DNMBPQ6XZF7 1577 aa36.05■■■■□ 3.36
CEACAM3-201ENST00000344550 SUPT5HO00267 1087 aaKnown RBP36.03■■■■□ 3.36
CEACAM3-201ENST00000344550 ZNF608Q9ULD9 1512 aaPredicted RBP35.8■■■■□ 3.32
CEACAM3-201ENST00000344550 OSCARQ8IYS5 282 aa35.77■■■■□ 3.32
CEACAM3-201ENST00000344550 POLA1P09884 1462 aaPredicted RBP35.77■■■■□ 3.32
CEACAM3-201ENST00000344550 TARBP1Q13395 1621 aaKnown RBP35.74■■■■□ 3.31
CEACAM3-201ENST00000344550 SOGA1O94964 1423 aa35.66■■■■□ 3.3
CEACAM3-201ENST00000344550 EIF4G3O43432 1585 aaKnown RBP35.65■■■■□ 3.3
CEACAM3-201ENST00000344550 CUX1P39880 1505 aa35.63■■■■□ 3.29
CEACAM3-201ENST00000344550 FGD5Q6ZNL6 1462 aa35.6■■■■□ 3.29
CEACAM3-201ENST00000344550 WDR97A6NE52 1622 aa35.59■■■■□ 3.29
CEACAM3-201ENST00000344550 AQRO60306 1485 aaKnown RBP eCLIP35.56■■■■□ 3.28
CEACAM3-201ENST00000344550 RAD54L2Q9Y4B4 1467 aa35.55■■■■□ 3.28
CEACAM3-201ENST00000344550 TDRD9Q8NDG6 1382 aaKnown RBP35.44■■■■□ 3.26
CEACAM3-201ENST00000344550 ABCA10Q8WWZ4 1543 aa35.32■■■■□ 3.24
CEACAM3-201ENST00000344550 WRNQ14191 1432 aaPredicted RBP eCLIP35.32■■■■□ 3.24
CEACAM3-201ENST00000344550 GRIN2BQ13224 1484 aa35.31■■■■□ 3.24
CEACAM3-201ENST00000344550 MAGI1Q96QZ7 1491 aaPredicted RBP35.29■■■■□ 3.24
CEACAM3-201ENST00000344550 TOP2BQ02880 1626 aa35.27■■■■□ 3.24
CEACAM3-201ENST00000344550 BIVM-ERCC5R4GMW8 1640 aa35.24■■■■□ 3.23
CEACAM3-201ENST00000344550 CHD1O14646 1710 aa35.23■■■■□ 3.23
CEACAM3-201ENST00000344550 GAPVD1Q14C86 1478 aa35.22■■■■□ 3.23
CEACAM3-201ENST00000344550 SNAPC4Q5SXM2 1469 aa35.22■■■■□ 3.23
CEACAM3-201ENST00000344550 FBLN2P98095 1184 aa35.21■■■■□ 3.23
CEACAM3-201ENST00000344550 TRIM41Q8WV44 630 aa35.16■■■■□ 3.22
CEACAM3-201ENST00000344550 CHMP7Q8WUX9 453 aaPredicted RBP35.15■■■■□ 3.22
CEACAM3-201ENST00000344550 ABCA5Q8WWZ7 1642 aa35.14■■■■□ 3.22
CEACAM3-201ENST00000344550 SYNJ1O43426 1573 aa35.14■■■■□ 3.22
CEACAM3-201ENST00000344550 SYNJ2O15056 1496 aa35.13■■■■□ 3.21
CEACAM3-201ENST00000344550 RIMBP3CA6NJZ7 1639 aa35.1■■■■□ 3.21
CEACAM3-201ENST00000344550 RIMBP3BA6NNM3 1639 aa35.1■■■■□ 3.21
CEACAM3-201ENST00000344550 RIMBP3Q9UFD9 1639 aa35.1■■■■□ 3.21
CEACAM3-201ENST00000344550 ARHGEF11O15085 1522 aa35.09■■■■□ 3.21
CEACAM3-201ENST00000344550 PBRM1Q86U86 1689 aa35.08■■■■□ 3.21
CEACAM3-201ENST00000344550 CLASP1Q7Z460 1538 aa34.96■■■■□ 3.19
CEACAM3-201ENST00000344550 ERICH3Q5RHP9 1530 aa34.91■■■■□ 3.18
CEACAM3-201ENST00000344550 FHAD1B1AJZ9 1412 aa34.85■■■■□ 3.17
CEACAM3-201ENST00000344550 ADAMTS12P58397 1594 aa34.83■■■■□ 3.17
CEACAM3-201ENST00000344550 GRIN2AQ12879 1464 aa34.82■■■■□ 3.16
CEACAM3-201ENST00000344550 CYB5RLQ6IPT4 315 aa34.78■■■■□ 3.16
CEACAM3-201ENST00000344550 ARAP1Q96P48 1450 aa34.76■■■■□ 3.15
CEACAM3-201ENST00000344550 NUP160Q12769 1436 aa34.72■■■■□ 3.15
CEACAM3-201ENST00000344550 KIF27Q86VH2 1401 aa34.65■■■■□ 3.14
CEACAM3-201ENST00000344550 CEP170Q5SW79 1584 aa34.59■■■■□ 3.13
CEACAM3-201ENST00000344550 IGF1RP08069 1367 aa34.55■■■■□ 3.12
CEACAM3-201ENST00000344550 SHROOM2Q13796 1616 aa34.48■■■■□ 3.11
CEACAM3-201ENST00000344550 CUL7Q14999 1698 aa34.46■■■■□ 3.11
CEACAM3-201ENST00000344550 JPH4Q96JJ6 628 aa34.37■■■■□ 3.09
CEACAM3-201ENST00000344550 CARMIL1Q5VZK9 1371 aa34.32■■■■□ 3.08
CEACAM3-201ENST00000344550 RUSC2Q8N2Y8 1516 aa34.31■■■■□ 3.08
Retrieved 100 of 20,778 RNA–protein pairs in 104.9 ms