RNA–Protein interactions for RNA: ENST00000629441.1

GSEC-202, G-quadruplex forming sequence containing lncRNA, humanhuman

TSL 2 BASIC

Gene GSEC, Length 1,572 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GSEC-202ENST00000629441 NISCHQ9Y2I1 1504 aa50.25■■■■■ 5.64
GSEC-202ENST00000629441 CCDC180Q9P1Z9 1646 aa44.92■■■■■ 4.78
GSEC-202ENST00000629441 ABCC9O60706 1549 aa44.74■■■■■ 4.75
GSEC-202ENST00000629441 RB1CC1Q8TDY2 1594 aa42.66■■■■■ 4.42
GSEC-202ENST00000629441 NACADO15069 1562 aa42.43■■■■■ 4.38
GSEC-202ENST00000629441 DCAF8L2P0C7V8 631 aa42.43■■■■■ 4.38
GSEC-202ENST00000629441 MYO15BQ96JP2 1530 aa41.91■■■■■ 4.3
GSEC-202ENST00000629441 DNAJC5BQ9UF47 199 aa41.8■■■■■ 4.28
GSEC-202ENST00000629441 PABPN1Q86U42 306 aaKnown RBP eCLIP41.76■■■■■ 4.28
GSEC-202ENST00000629441 UNC13AQ9UPW8 1703 aa41.74■■■■■ 4.27
GSEC-202ENST00000629441 ZCCHC6Q5VYS8 1495 aaKnown RBP41.68■■■■■ 4.26
GSEC-202ENST00000629441 DCAF1Q9Y4B6 1507 aa41.49■■■■■ 4.23
GSEC-202ENST00000629441 BICRAQ9NZM4 1560 aa41.43■■■■■ 4.22
GSEC-202ENST00000629441 SCRIBQ14160 1630 aa41.01■■■■■ 4.16
GSEC-202ENST00000629441 SHROOM4Q9ULL8 1493 aa40.81■■■■■ 4.12
GSEC-202ENST00000629441 CC2D2AQ9P2K1 1620 aa40.42■■■■■ 4.06
GSEC-202ENST00000629441 EIF4G1Q04637 1599 aaKnown RBP40.38■■■■■ 4.05
GSEC-202ENST00000629441 CECR2Q9BXF3 1484 aa40.26■■■■■ 4.04
GSEC-202ENST00000629441 NCAPD3P42695 1498 aa39.19■■■■□ 3.86
GSEC-202ENST00000629441 SMARCA4P51532 1647 aa39.13■■■■□ 3.86
GSEC-202ENST00000629441 ATAD2BQ9ULI0 1458 aa39.12■■■■□ 3.85
GSEC-202ENST00000629441 SMARCA2P51531 1590 aa38.99■■■■□ 3.83
GSEC-202ENST00000629441 BAZ1AQ9NRL2 1556 aaPredicted RBP38.97■■■■□ 3.83
GSEC-202ENST00000629441 HMGXB3Q12766 1538 aa38.88■■■■□ 3.82
GSEC-202ENST00000629441 MROH2BQ7Z745 1585 aa38.75■■■■□ 3.79
GSEC-202ENST00000629441 BAZ1BQ9UIG0 1483 aaKnown RBP38.75■■■■□ 3.79
GSEC-202ENST00000629441 PEG3Q9GZU2 1588 aa38.73■■■■□ 3.79
GSEC-202ENST00000629441 ERCC6Q03468 1493 aa38.59■■■■□ 3.77
GSEC-202ENST00000629441 NESP48681 1621 aa38.52■■■■□ 3.76
GSEC-202ENST00000629441 CUX2O14529 1486 aa38.4■■■■□ 3.74
GSEC-202ENST00000629441 WIZO95785 1651 aa38.31■■■■□ 3.72
GSEC-202ENST00000629441 LAMC3Q9Y6N6 1575 aa38.25■■■■□ 3.71
GSEC-202ENST00000629441 DNAJC5Q9H3Z4 198 aa38.14■■■■□ 3.7
GSEC-202ENST00000629441 RSF1Q96T23 1441 aaPredicted RBP38.06■■■■□ 3.68
GSEC-202ENST00000629441 PDS5BQ9NTI5 1447 aa38.04■■■■□ 3.68
GSEC-202ENST00000629441 CADPSQ9ULU8 1353 aa38.04■■■■□ 3.68
GSEC-202ENST00000629441 THOC2Q8NI27 1593 aaKnown RBP38.02■■■■□ 3.68
GSEC-202ENST00000629441 KIF21AQ7Z4S6 1674 aa38.01■■■■□ 3.68
GSEC-202ENST00000629441 TOP2AP11388 1531 aaKnown RBP37.79■■■■□ 3.64
GSEC-202ENST00000629441 MRC2Q9UBG0 1479 aa37.68■■■■□ 3.62
GSEC-202ENST00000629441 CFTRP13569 1480 aa37.64■■■■□ 3.62
GSEC-202ENST00000629441 FANCD2Q9BXW9 1451 aa37.59■■■■□ 3.61
GSEC-202ENST00000629441 CEP164Q9UPV0 1460 aa37.59■■■■□ 3.61
GSEC-202ENST00000629441 WDR62O43379 1518 aa37.56■■■■□ 3.6
GSEC-202ENST00000629441 CCDC88BA6NC98 1476 aa37.42■■■■□ 3.58
GSEC-202ENST00000629441 URB2Q14146 1524 aaKnown RBP37.27■■■■□ 3.56
GSEC-202ENST00000629441 PRDM2Q13029 1718 aa37.26■■■■□ 3.56
GSEC-202ENST00000629441 TOPBP1Q92547 1522 aa36.91■■■■□ 3.5
GSEC-202ENST00000629441 ABCC8Q09428 1581 aa36.83■■■■□ 3.49
GSEC-202ENST00000629441 IFT140Q96RY7 1462 aa36.83■■■■□ 3.49
GSEC-202ENST00000629441 ZNF608Q9ULD9 1512 aaPredicted RBP36.78■■■■□ 3.48
GSEC-202ENST00000629441 DNMBPQ6XZF7 1577 aa36.78■■■■□ 3.48
GSEC-202ENST00000629441 OSCARQ8IYS5 282 aa36.77■■■■□ 3.48
GSEC-202ENST00000629441 SUPT5HO00267 1087 aaKnown RBP36.66■■■■□ 3.46
GSEC-202ENST00000629441 TRIM41Q8WV44 630 aa36.61■■■■□ 3.45
GSEC-202ENST00000629441 TARBP1Q13395 1621 aaKnown RBP36.55■■■■□ 3.44
GSEC-202ENST00000629441 POLA1P09884 1462 aaPredicted RBP36.55■■■■□ 3.44
GSEC-202ENST00000629441 EIF4G3O43432 1585 aaKnown RBP36.55■■■■□ 3.44
GSEC-202ENST00000629441 AQRO60306 1485 aaKnown RBP eCLIP36.5■■■■□ 3.43
GSEC-202ENST00000629441 RAD54L2Q9Y4B4 1467 aa36.45■■■■□ 3.43
GSEC-202ENST00000629441 SOGA1O94964 1423 aa36.42■■■■□ 3.42
GSEC-202ENST00000629441 CUX1P39880 1505 aa36.38■■■■□ 3.41
GSEC-202ENST00000629441 FGD5Q6ZNL6 1462 aa36.36■■■■□ 3.41
GSEC-202ENST00000629441 TDRD9Q8NDG6 1382 aaKnown RBP36.32■■■■□ 3.41
GSEC-202ENST00000629441 CHD1O14646 1710 aa36.25■■■■□ 3.39
GSEC-202ENST00000629441 FBLN2P98095 1184 aa36.24■■■■□ 3.39
GSEC-202ENST00000629441 RIMBP3CA6NJZ7 1639 aa36.22■■■■□ 3.39
GSEC-202ENST00000629441 RIMBP3BA6NNM3 1639 aa36.22■■■■□ 3.39
GSEC-202ENST00000629441 RIMBP3Q9UFD9 1639 aa36.22■■■■□ 3.39
GSEC-202ENST00000629441 WDR97A6NE52 1622 aa36.15■■■■□ 3.38
GSEC-202ENST00000629441 ARHGEF11O15085 1522 aa36.12■■■■□ 3.37
GSEC-202ENST00000629441 SNAPC4Q5SXM2 1469 aa36.1■■■■□ 3.37
GSEC-202ENST00000629441 GRIN2BQ13224 1484 aa36.03■■■■□ 3.36
GSEC-202ENST00000629441 CHMP7Q8WUX9 453 aaPredicted RBP36■■■■□ 3.35
GSEC-202ENST00000629441 MAGI1Q96QZ7 1491 aaPredicted RBP35.99■■■■□ 3.35
GSEC-202ENST00000629441 GAPVD1Q14C86 1478 aa35.96■■■■□ 3.35
GSEC-202ENST00000629441 ABCA10Q8WWZ4 1543 aa35.95■■■■□ 3.35
GSEC-202ENST00000629441 CYB5RLQ6IPT4 315 aa35.92■■■■□ 3.34
GSEC-202ENST00000629441 PBRM1Q86U86 1689 aa35.91■■■■□ 3.34
GSEC-202ENST00000629441 SYNJ2O15056 1496 aa35.88■■■■□ 3.33
GSEC-202ENST00000629441 WRNQ14191 1432 aaPredicted RBP eCLIP35.88■■■■□ 3.33
GSEC-202ENST00000629441 ABCA5Q8WWZ7 1642 aa35.86■■■■□ 3.33
GSEC-202ENST00000629441 TOP2BQ02880 1626 aa35.86■■■■□ 3.33
GSEC-202ENST00000629441 BIVM-ERCC5R4GMW8 1640 aa35.84■■■■□ 3.33
GSEC-202ENST00000629441 SYNJ1O43426 1573 aa35.83■■■■□ 3.33
GSEC-202ENST00000629441 CLASP1Q7Z460 1538 aa35.82■■■■□ 3.32
GSEC-202ENST00000629441 ARAP1Q96P48 1450 aa35.79■■■■□ 3.32
GSEC-202ENST00000629441 GRIN2AQ12879 1464 aa35.57■■■■□ 3.28
GSEC-202ENST00000629441 ADAMTS12P58397 1594 aa35.56■■■■□ 3.28
GSEC-202ENST00000629441 FHAD1B1AJZ9 1412 aa35.51■■■■□ 3.27
GSEC-202ENST00000629441 ERICH3Q5RHP9 1530 aa35.5■■■■□ 3.27
GSEC-202ENST00000629441 CEP170Q5SW79 1584 aa35.44■■■■□ 3.26
GSEC-202ENST00000629441 NUP160Q12769 1436 aa35.43■■■■□ 3.26
GSEC-202ENST00000629441 TRHP20396 242 aaPredicted RBP35.43■■■■□ 3.26
GSEC-202ENST00000629441 ERCC6L2Q5T890 1561 aa35.32■■■■□ 3.25
GSEC-202ENST00000629441 SHROOM2Q13796 1616 aa35.23■■■■□ 3.23
GSEC-202ENST00000629441 KIF27Q86VH2 1401 aa35.18■■■■□ 3.22
GSEC-202ENST00000629441 IGF1RP08069 1367 aa35.18■■■■□ 3.22
GSEC-202ENST00000629441 JPH4Q96JJ6 628 aa35.15■■■■□ 3.22
GSEC-202ENST00000629441 PRG4Q92954 1404 aaPredicted RBP35.11■■■■□ 3.21
Retrieved 100 of 20,778 RNA–protein pairs in 8.3 ms