RNA–Protein interactions for RNA: ENST00000461494.5

PDCD10-202, Transcript of programmed cell death 10, humanhuman

APPRIS P1 TSL 3 BASIC

Gene PDCD10, Length 934 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD10-202ENST00000461494 NISCHQ9Y2I1 1504 aa49.33■■■■■ 5.49
PDCD10-202ENST00000461494 CCDC180Q9P1Z9 1646 aa44.06■■■■■ 4.64
PDCD10-202ENST00000461494 ABCC9O60706 1549 aa43.37■■■■■ 4.53
PDCD10-202ENST00000461494 RB1CC1Q8TDY2 1594 aa41.61■■■■■ 4.25
PDCD10-202ENST00000461494 NACADO15069 1562 aa41.47■■■■■ 4.23
PDCD10-202ENST00000461494 DCAF8L2P0C7V8 631 aa41.33■■■■■ 4.21
PDCD10-202ENST00000461494 MYO15BQ96JP2 1530 aa41.11■■■■■ 4.17
PDCD10-202ENST00000461494 ZCCHC6Q5VYS8 1495 aaKnown RBP41.01■■■■■ 4.16
PDCD10-202ENST00000461494 DCAF1Q9Y4B6 1507 aa40.81■■■■■ 4.12
PDCD10-202ENST00000461494 UNC13AQ9UPW8 1703 aa40.73■■■■■ 4.11
PDCD10-202ENST00000461494 PABPN1Q86U42 306 aaKnown RBP eCLIP40.44■■■■■ 4.06
PDCD10-202ENST00000461494 BICRAQ9NZM4 1560 aa40.35■■■■■ 4.05
PDCD10-202ENST00000461494 SCRIBQ14160 1630 aa40.13■■■■■ 4.02
PDCD10-202ENST00000461494 DNAJC5BQ9UF47 199 aa40.09■■■■■ 4.01
PDCD10-202ENST00000461494 SHROOM4Q9ULL8 1493 aa39.89■■■■□ 3.98
PDCD10-202ENST00000461494 EIF4G1Q04637 1599 aaKnown RBP39.31■■■■□ 3.88
PDCD10-202ENST00000461494 CC2D2AQ9P2K1 1620 aa39.25■■■■□ 3.87
PDCD10-202ENST00000461494 CECR2Q9BXF3 1484 aa39.01■■■■□ 3.84
PDCD10-202ENST00000461494 SMARCA4P51532 1647 aa38.37■■■■□ 3.73
PDCD10-202ENST00000461494 BAZ1AQ9NRL2 1556 aaPredicted RBP38.27■■■■□ 3.72
PDCD10-202ENST00000461494 NCAPD3P42695 1498 aa38.25■■■■□ 3.71
PDCD10-202ENST00000461494 ATAD2BQ9ULI0 1458 aa38.21■■■■□ 3.71
PDCD10-202ENST00000461494 SMARCA2P51531 1590 aa38.18■■■■□ 3.7
PDCD10-202ENST00000461494 HMGXB3Q12766 1538 aa38.04■■■■□ 3.68
PDCD10-202ENST00000461494 MROH2BQ7Z745 1585 aa38■■■■□ 3.67
PDCD10-202ENST00000461494 PEG3Q9GZU2 1588 aa38■■■■□ 3.67
PDCD10-202ENST00000461494 BAZ1BQ9UIG0 1483 aaKnown RBP37.89■■■■□ 3.66
PDCD10-202ENST00000461494 WIZO95785 1651 aa37.62■■■■□ 3.61
PDCD10-202ENST00000461494 RSF1Q96T23 1441 aaPredicted RBP37.43■■■■□ 3.58
PDCD10-202ENST00000461494 NESP48681 1621 aa37.43■■■■□ 3.58
PDCD10-202ENST00000461494 ERCC6Q03468 1493 aa37.41■■■■□ 3.58
PDCD10-202ENST00000461494 LAMC3Q9Y6N6 1575 aa37.33■■■■□ 3.57
PDCD10-202ENST00000461494 TOP2AP11388 1531 aaKnown RBP37.17■■■■□ 3.54
PDCD10-202ENST00000461494 CUX2O14529 1486 aa37.15■■■■□ 3.54
PDCD10-202ENST00000461494 CADPSQ9ULU8 1353 aa37.11■■■■□ 3.53
PDCD10-202ENST00000461494 PDS5BQ9NTI5 1447 aa37.06■■■■□ 3.52
PDCD10-202ENST00000461494 KIF21AQ7Z4S6 1674 aa37.04■■■■□ 3.52
PDCD10-202ENST00000461494 THOC2Q8NI27 1593 aaKnown RBP36.96■■■■□ 3.51
PDCD10-202ENST00000461494 CFTRP13569 1480 aa36.82■■■■□ 3.49
PDCD10-202ENST00000461494 CCDC88BA6NC98 1476 aa36.72■■■■□ 3.47
PDCD10-202ENST00000461494 MRC2Q9UBG0 1479 aa36.69■■■■□ 3.46
PDCD10-202ENST00000461494 FANCD2Q9BXW9 1451 aa36.69■■■■□ 3.46
PDCD10-202ENST00000461494 CEP164Q9UPV0 1460 aa36.68■■■■□ 3.46
PDCD10-202ENST00000461494 PRDM2Q13029 1718 aa36.63■■■■□ 3.45
PDCD10-202ENST00000461494 WDR62O43379 1518 aa36.59■■■■□ 3.45
PDCD10-202ENST00000461494 DNAJC5Q9H3Z4 198 aa36.39■■■■□ 3.42
PDCD10-202ENST00000461494 URB2Q14146 1524 aaKnown RBP36.34■■■■□ 3.41
PDCD10-202ENST00000461494 SUPT5HO00267 1087 aaKnown RBP36.23■■■■□ 3.39
PDCD10-202ENST00000461494 ABCC8Q09428 1581 aa36.07■■■■□ 3.37
PDCD10-202ENST00000461494 TOPBP1Q92547 1522 aa36.07■■■■□ 3.36
PDCD10-202ENST00000461494 DNMBPQ6XZF7 1577 aa36.02■■■■□ 3.36
PDCD10-202ENST00000461494 IFT140Q96RY7 1462 aa35.92■■■■□ 3.34
PDCD10-202ENST00000461494 ZNF608Q9ULD9 1512 aaPredicted RBP35.78■■■■□ 3.32
PDCD10-202ENST00000461494 POLA1P09884 1462 aaPredicted RBP35.73■■■■□ 3.31
PDCD10-202ENST00000461494 TARBP1Q13395 1621 aaKnown RBP35.72■■■■□ 3.31
PDCD10-202ENST00000461494 CUX1P39880 1505 aa35.67■■■■□ 3.3
PDCD10-202ENST00000461494 EIF4G3O43432 1585 aaKnown RBP35.66■■■■□ 3.3
PDCD10-202ENST00000461494 FGD5Q6ZNL6 1462 aa35.6■■■■□ 3.29
PDCD10-202ENST00000461494 SOGA1O94964 1423 aa35.58■■■■□ 3.29
PDCD10-202ENST00000461494 RAD54L2Q9Y4B4 1467 aa35.58■■■■□ 3.29
PDCD10-202ENST00000461494 OSCARQ8IYS5 282 aa35.54■■■■□ 3.28
PDCD10-202ENST00000461494 AQRO60306 1485 aaKnown RBP eCLIP35.54■■■■□ 3.284e-11■■□□□ 13.7
PDCD10-202ENST00000461494 WDR97A6NE52 1622 aa35.44■■■■□ 3.26
PDCD10-202ENST00000461494 TDRD9Q8NDG6 1382 aaKnown RBP35.41■■■■□ 3.26
PDCD10-202ENST00000461494 CHD1O14646 1710 aa35.32■■■■□ 3.24
PDCD10-202ENST00000461494 BIVM-ERCC5R4GMW8 1640 aa35.32■■■■□ 3.24
PDCD10-202ENST00000461494 WRNQ14191 1432 aaPredicted RBP eCLIP35.32■■■■□ 3.24
PDCD10-202ENST00000461494 TOP2BQ02880 1626 aa35.31■■■■□ 3.24
PDCD10-202ENST00000461494 SYNJ1O43426 1573 aa35.25■■■■□ 3.23
PDCD10-202ENST00000461494 ABCA10Q8WWZ4 1543 aa35.25■■■■□ 3.23
PDCD10-202ENST00000461494 GRIN2BQ13224 1484 aa35.22■■■■□ 3.23
PDCD10-202ENST00000461494 SNAPC4Q5SXM2 1469 aa35.21■■■■□ 3.23
PDCD10-202ENST00000461494 PBRM1Q86U86 1689 aa35.18■■■■□ 3.22
PDCD10-202ENST00000461494 FBLN2P98095 1184 aa35.18■■■■□ 3.22
PDCD10-202ENST00000461494 GAPVD1Q14C86 1478 aa35.17■■■■□ 3.22
PDCD10-202ENST00000461494 MAGI1Q96QZ7 1491 aaPredicted RBP35.16■■■■□ 3.22
PDCD10-202ENST00000461494 ABCA5Q8WWZ7 1642 aa35.16■■■■□ 3.22
PDCD10-202ENST00000461494 RIMBP3CA6NJZ7 1639 aa35.04■■■■□ 3.2
PDCD10-202ENST00000461494 RIMBP3BA6NNM3 1639 aa35.04■■■■□ 3.2
PDCD10-202ENST00000461494 RIMBP3Q9UFD9 1639 aa35.04■■■■□ 3.2
PDCD10-202ENST00000461494 CHMP7Q8WUX9 453 aaPredicted RBP35.04■■■■□ 3.2
PDCD10-202ENST00000461494 TRIM41Q8WV44 630 aa35.04■■■■□ 3.2
PDCD10-202ENST00000461494 SYNJ2O15056 1496 aa35.03■■■■□ 3.2
PDCD10-202ENST00000461494 ARHGEF11O15085 1522 aa34.97■■■■□ 3.19
PDCD10-202ENST00000461494 CLASP1Q7Z460 1538 aa34.87■■■■□ 3.17
PDCD10-202ENST00000461494 ADAMTS12P58397 1594 aa34.83■■■■□ 3.17
PDCD10-202ENST00000461494 ERICH3Q5RHP9 1530 aa34.83■■■■□ 3.17
PDCD10-202ENST00000461494 GRIN2AQ12879 1464 aa34.76■■■■□ 3.15
PDCD10-202ENST00000461494 FHAD1B1AJZ9 1412 aa34.74■■■■□ 3.15
PDCD10-202ENST00000461494 ARAP1Q96P48 1450 aa34.66■■■■□ 3.14
PDCD10-202ENST00000461494 CYB5RLQ6IPT4 315 aa34.66■■■■□ 3.14
PDCD10-202ENST00000461494 CEP170Q5SW79 1584 aa34.62■■■■□ 3.13
PDCD10-202ENST00000461494 NUP160Q12769 1436 aa34.61■■■■□ 3.13
PDCD10-202ENST00000461494 KIF27Q86VH2 1401 aa34.6■■■■□ 3.13
PDCD10-202ENST00000461494 IGF1RP08069 1367 aa34.49■■■■□ 3.11
PDCD10-202ENST00000461494 CUL7Q14999 1698 aa34.48■■■■□ 3.11
PDCD10-202ENST00000461494 SHROOM2Q13796 1616 aa34.43■■■■□ 3.1
PDCD10-202ENST00000461494 ERCC6L2Q5T890 1561 aa34.36■■■■□ 3.09
PDCD10-202ENST00000461494 RUSC2Q8N2Y8 1516 aa34.34■■■■□ 3.09
PDCD10-202ENST00000461494 CARMIL1Q5VZK9 1371 aa34.28■■■■□ 3.08
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms