RNA–Protein interactions for RNA: ENST00000535306.6

RNF135-205, Transcript of ring finger protein 135, humanhuman

TSL 1 (best) BASIC

Gene RNF135, Length 2,098 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF135-205ENST00000535306 NISCHQ9Y2I1 1504 aa42.76■■■■■ 4.44
RNF135-205ENST00000535306 CCDC180Q9P1Z9 1646 aa36.79■■■■□ 3.48
RNF135-205ENST00000535306 ZCCHC6Q5VYS8 1495 aaKnown RBP36.08■■■■□ 3.37
RNF135-205ENST00000535306 SHROOM4Q9ULL8 1493 aa35.62■■■■□ 3.29
RNF135-205ENST00000535306 DCAF1Q9Y4B6 1507 aa35.27■■■■□ 3.24
RNF135-205ENST00000535306 DCAF8L2P0C7V8 631 aa35.19■■■■□ 3.22
RNF135-205ENST00000535306 SUPT5HO00267 1087 aaKnown RBP34.66■■■■□ 3.14
RNF135-205ENST00000535306 MYO15BQ96JP2 1530 aa34.52■■■■□ 3.12
RNF135-205ENST00000535306 ABCC9O60706 1549 aa34.25■■■■□ 3.07
RNF135-205ENST00000535306 NACADO15069 1562 aa34.1■■■■□ 3.05
RNF135-205ENST00000535306 SCRIBQ14160 1630 aa34.1■■■■□ 3.05
RNF135-205ENST00000535306 RB1CC1Q8TDY2 1594 aa33.63■■■□□ 2.97
RNF135-205ENST00000535306 CHIC1Q5VXU3 224 aa33.59■■■□□ 2.97
RNF135-205ENST00000535306 RSF1Q96T23 1441 aaPredicted RBP33.54■■■□□ 2.96
RNF135-205ENST00000535306 CECR2Q9BXF3 1484 aa33.26■■■□□ 2.91
RNF135-205ENST00000535306 MROH2BQ7Z745 1585 aa33.13■■■□□ 2.89
RNF135-205ENST00000535306 UNC13AQ9UPW8 1703 aa33.05■■■□□ 2.88
RNF135-205ENST00000535306 BAZ1AQ9NRL2 1556 aaPredicted RBP32.91■■■□□ 2.86
RNF135-205ENST00000535306 WIZO95785 1651 aa32.89■■■□□ 2.86
RNF135-205ENST00000535306 BICRAQ9NZM4 1560 aa32.7■■■□□ 2.83
RNF135-205ENST00000535306 SMARCA4P51532 1647 aa32.69■■■□□ 2.82
RNF135-205ENST00000535306 PABPN1Q86U42 306 aaKnown RBP eCLIP32.53■■■□□ 2.8
RNF135-205ENST00000535306 TOP2AP11388 1531 aaKnown RBP32.5■■■□□ 2.79
RNF135-205ENST00000535306 TRIM41Q8WV44 630 aa32.46■■■□□ 2.79
RNF135-205ENST00000535306 LOC105371045A0A1W2PR82 267 aa32.41■■■□□ 2.78
RNF135-205ENST00000535306 EIF4G1Q04637 1599 aaKnown RBP32.34■■■□□ 2.77
RNF135-205ENST00000535306 SMARCA2P51531 1590 aa32.26■■■□□ 2.75
RNF135-205ENST00000535306 CCDC88BA6NC98 1476 aa32.26■■■□□ 2.75
RNF135-205ENST00000535306 PEG3Q9GZU2 1588 aa32.22■■■□□ 2.75
RNF135-205ENST00000535306 FAM9AQ8IZU1 332 aaPredicted RBP31.99■■■□□ 2.71
RNF135-205ENST00000535306 ATAD2BQ9ULI0 1458 aa31.97■■■□□ 2.71
RNF135-205ENST00000535306 ABCC8Q09428 1581 aa31.88■■■□□ 2.69
RNF135-205ENST00000535306 BAZ1BQ9UIG0 1483 aaKnown RBP31.82■■■□□ 2.68
RNF135-205ENST00000535306 PCGF6Q9BYE7 350 aa31.76■■■□□ 2.67
RNF135-205ENST00000535306 EHMT2Q96KQ7 1210 aa31.57■■■□□ 2.64
RNF135-205ENST00000535306 NCAPD3P42695 1498 aa31.53■■■□□ 2.64
RNF135-205ENST00000535306 WRNQ14191 1432 aaPredicted RBP eCLIP31.51■■■□□ 2.64
RNF135-205ENST00000535306 HMGXB3Q12766 1538 aa31.51■■■□□ 2.64
RNF135-205ENST00000535306 HRCP23327 699 aa31.47■■■□□ 2.63
RNF135-205ENST00000535306 SOGA1O94964 1423 aa31.47■■■□□ 2.63
RNF135-205ENST00000535306 TRIM26Q12899 539 aaPredicted RBP31.47■■■□□ 2.63
RNF135-205ENST00000535306 EEA1Q15075 1411 aa31.41■■■□□ 2.62
RNF135-205ENST00000535306 SYNJ1O43426 1573 aa31.38■■■□□ 2.61
RNF135-205ENST00000535306 RUSC2Q8N2Y8 1516 aa31.33■■■□□ 2.61
RNF135-205ENST00000535306 CSRNP3Q8WYN3 585 aa31.27■■■□□ 2.6
RNF135-205ENST00000535306 TNIKQ9UKE5 1360 aa31.15■■■□□ 2.58
RNF135-205ENST00000535306 TOP2BQ02880 1626 aa31.13■■■□□ 2.57
RNF135-205ENST00000535306 CEP162Q5TB80 1403 aa31.08■■■□□ 2.57
RNF135-205ENST00000535306 CFTRP13569 1480 aa31.08■■■□□ 2.57
RNF135-205ENST00000535306 GOLGA3Q08378 1498 aa31.07■■■□□ 2.56
RNF135-205ENST00000535306 BIVM-ERCC5R4GMW8 1640 aa31.06■■■□□ 2.56
RNF135-205ENST00000535306 KIF21BO75037 1637 aa30.99■■■□□ 2.55
RNF135-205ENST00000535306 CEP164Q9UPV0 1460 aa30.98■■■□□ 2.55
RNF135-205ENST00000535306 UBTFP17480 764 aaKnown RBP30.96■■■□□ 2.55
RNF135-205ENST00000535306 CC2D2AQ9P2K1 1620 aa30.96■■■□□ 2.55
RNF135-205ENST00000535306 CUX1P39880 1505 aa30.91■■■□□ 2.54
RNF135-205ENST00000535306 PRDM2Q13029 1718 aa30.87■■■□□ 2.53
RNF135-205ENST00000535306 PPARGC1BQ86YN6 1023 aaKnown RBP30.85■■■□□ 2.53
RNF135-205ENST00000535306 CADPSQ9ULU8 1353 aa30.8■■■□□ 2.52
RNF135-205ENST00000535306 RAPGEF2Q9Y4G8 1499 aa30.76■■■□□ 2.52
RNF135-205ENST00000535306 PRXQ9BXM0 1461 aa30.65■■■□□ 2.5
RNF135-205ENST00000535306 CLIP1P30622 1438 aa30.64■■■□□ 2.5
RNF135-205ENST00000535306 ERICH3Q5RHP9 1530 aa30.62■■■□□ 2.49
RNF135-205ENST00000535306 KIF27Q86VH2 1401 aa30.61■■■□□ 2.49
RNF135-205ENST00000535306 ZEB1P37275 1124 aaPredicted RBP30.56■■■□□ 2.48
RNF135-205ENST00000535306 FANCD2Q9BXW9 1451 aa30.48■■■□□ 2.47
RNF135-205ENST00000535306 VPS8Q8N3P4 1428 aa30.47■■■□□ 2.47
RNF135-205ENST00000535306 FGD5Q6ZNL6 1462 aa30.42■■■□□ 2.46
RNF135-205ENST00000535306 TTBK1Q5TCY1 1321 aaPredicted RBP30.42■■■□□ 2.46
RNF135-205ENST00000535306 CUX2O14529 1486 aa30.39■■■□□ 2.46
RNF135-205ENST00000535306 NESP48681 1621 aa30.36■■■□□ 2.45
RNF135-205ENST00000535306 IGF1RP08069 1367 aa30.32■■■□□ 2.44
RNF135-205ENST00000535306 RANGAP1P46060 587 aaPredicted RBP30.31■■■□□ 2.44
RNF135-205ENST00000535306 DNMBPQ6XZF7 1577 aa30.3■■■□□ 2.44
RNF135-205ENST00000535306 LAMC3Q9Y6N6 1575 aa30.27■■■□□ 2.44
RNF135-205ENST00000535306 ARAP1Q96P48 1450 aa30.25■■■□□ 2.43
RNF135-205ENST00000535306 TOPBP1Q92547 1522 aa30.24■■■□□ 2.43
RNF135-205ENST00000535306 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP30.19■■■□□ 2.42
RNF135-205ENST00000535306 APLP2Q06481 763 aa30.16■■■□□ 2.42
RNF135-205ENST00000535306 POLA1P09884 1462 aaPredicted RBP30.16■■■□□ 2.42
RNF135-205ENST00000535306 CARMIL1Q5VZK9 1371 aa30.16■■■□□ 2.42
RNF135-205ENST00000535306 ABCA10Q8WWZ4 1543 aa30.15■■■□□ 2.42
RNF135-205ENST00000535306 DNAJC5BQ9UF47 199 aa30.13■■■□□ 2.41
RNF135-205ENST00000535306 RAD54L2Q9Y4B4 1467 aa30.13■■■□□ 2.41
RNF135-205ENST00000535306 CCER1Q8TC90 406 aaPredicted RBP30.11■■■□□ 2.41
RNF135-205ENST00000535306 ARHGAP35Q9NRY4 1499 aa30.1■■■□□ 2.41
RNF135-205ENST00000535306 URB2Q14146 1524 aaKnown RBP30.07■■■□□ 2.4
RNF135-205ENST00000535306 PDS5BQ9NTI5 1447 aa30.04■■■□□ 2.4
RNF135-205ENST00000535306 WDR97A6NE52 1622 aa29.95■■■□□ 2.38
RNF135-205ENST00000535306 KIF21AQ7Z4S6 1674 aa29.91■■■□□ 2.38
RNF135-205ENST00000535306 CUL7Q14999 1698 aa29.9■■■□□ 2.38
RNF135-205ENST00000535306 KANK4Q5T7N3 995 aaPredicted RBP29.89■■■□□ 2.37
RNF135-205ENST00000535306 HNRNPUL2Q1KMD3 747 aaKnown RBP29.85■■■□□ 2.37
RNF135-205ENST00000535306 ABCA5Q8WWZ7 1642 aa29.82■■■□□ 2.36
RNF135-205ENST00000535306 TDRD9Q8NDG6 1382 aaKnown RBP29.76■■■□□ 2.36
RNF135-205ENST00000535306 MAP3K1Q13233 1512 aa29.74■■■□□ 2.35
RNF135-205ENST00000535306 GAPVD1Q14C86 1478 aa29.74■■■□□ 2.35
RNF135-205ENST00000535306 TARBP1Q13395 1621 aaKnown RBP29.71■■■□□ 2.35
RNF135-205ENST00000535306 CTTNBP2Q8WZ74 1663 aa29.71■■■□□ 2.35
RNF135-205ENST00000535306 RRBP1Q9P2E9 1410 aaKnown RBP29.7■■■□□ 2.35
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms