Protein–RNA interactions for Protein: Q9HCG8

CWC22, Pre-mRNA-splicing factor CWC22 homolog, humanhuman

Known RBP Predictions only

Length 908 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CWC22Q9HCG8 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC31.28■■■□□ 2.6
CWC22Q9HCG8 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC31.28■■■□□ 2.6
CWC22Q9HCG8 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC31.27■■■□□ 2.6
CWC22Q9HCG8 DUX4L29-201ENST00000425409 679 ntBASIC31.27■■■□□ 2.6
CWC22Q9HCG8 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC31.27■■■□□ 2.6
CWC22Q9HCG8 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC31.26■■■□□ 2.59
CWC22Q9HCG8 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC31.26■■■□□ 2.59
CWC22Q9HCG8 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC31.25■■■□□ 2.59
CWC22Q9HCG8 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC31.25■■■□□ 2.59
CWC22Q9HCG8 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC31.24■■■□□ 2.59
CWC22Q9HCG8 AC142086.6-201ENST00000621154 1765 ntBASIC31.23■■■□□ 2.59
CWC22Q9HCG8 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC31.23■■■□□ 2.59
CWC22Q9HCG8 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC31.23■■■□□ 2.59
CWC22Q9HCG8 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC31.23■■■□□ 2.59
CWC22Q9HCG8 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC31.23■■■□□ 2.59
CWC22Q9HCG8 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC31.22■■■□□ 2.59
CWC22Q9HCG8 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC31.22■■■□□ 2.59
CWC22Q9HCG8 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC31.22■■■□□ 2.59
CWC22Q9HCG8 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC31.22■■■□□ 2.59
CWC22Q9HCG8 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC31.22■■■□□ 2.59
CWC22Q9HCG8 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
CWC22Q9HCG8 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
CWC22Q9HCG8 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
CWC22Q9HCG8 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC31.21■■■□□ 2.59
CWC22Q9HCG8 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
CWC22Q9HCG8 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC31.21■■■□□ 2.59
CWC22Q9HCG8 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC31.2■■■□□ 2.59
CWC22Q9HCG8 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC31.2■■■□□ 2.58
CWC22Q9HCG8 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC31.2■■■□□ 2.58
CWC22Q9HCG8 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC31.19■■■□□ 2.58
CWC22Q9HCG8 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC31.19■■■□□ 2.58
CWC22Q9HCG8 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC31.18■■■□□ 2.58
CWC22Q9HCG8 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC31.18■■■□□ 2.58
CWC22Q9HCG8 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC31.18■■■□□ 2.58
CWC22Q9HCG8 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC31.17■■■□□ 2.58
CWC22Q9HCG8 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
CWC22Q9HCG8 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
CWC22Q9HCG8 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC31.16■■■□□ 2.58
CWC22Q9HCG8 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC31.16■■■□□ 2.58
CWC22Q9HCG8 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC31.15■■■□□ 2.58
CWC22Q9HCG8 CIB2-204ENST00000557846 934 ntTSL 3 BASIC31.15■■■□□ 2.58
CWC22Q9HCG8 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC31.14■■■□□ 2.58
CWC22Q9HCG8 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC31.14■■■□□ 2.57
CWC22Q9HCG8 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC31.13■■■□□ 2.57
CWC22Q9HCG8 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC31.13■■■□□ 2.57
CWC22Q9HCG8 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC31.13■■■□□ 2.57
CWC22Q9HCG8 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC31.13■■■□□ 2.57
CWC22Q9HCG8 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC31.12■■■□□ 2.57
CWC22Q9HCG8 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC31.12■■■□□ 2.57
CWC22Q9HCG8 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC31.12■■■□□ 2.57
CWC22Q9HCG8 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC31.11■■■□□ 2.57
CWC22Q9HCG8 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC31.11■■■□□ 2.57
CWC22Q9HCG8 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC31.1■■■□□ 2.57
CWC22Q9HCG8 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC31.09■■■□□ 2.57
CWC22Q9HCG8 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC31.09■■■□□ 2.57
CWC22Q9HCG8 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC31.08■■■□□ 2.57
CWC22Q9HCG8 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC31.08■■■□□ 2.57
CWC22Q9HCG8 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC31.07■■■□□ 2.56
CWC22Q9HCG8 AC021231.2-201ENST00000594613 730 ntBASIC31.06■■■□□ 2.56
CWC22Q9HCG8 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC31.05■■■□□ 2.56
CWC22Q9HCG8 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC31.05■■■□□ 2.56
CWC22Q9HCG8 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC31.05■■■□□ 2.56
CWC22Q9HCG8 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC31.05■■■□□ 2.56
CWC22Q9HCG8 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC31.05■■■□□ 2.56
CWC22Q9HCG8 AL139393.2-201ENST00000608721 2025 ntBASIC31.05■■■□□ 2.56
CWC22Q9HCG8 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC31.05■■■□□ 2.56
CWC22Q9HCG8 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC31.04■■■□□ 2.56
CWC22Q9HCG8 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC31.04■■■□□ 2.56
CWC22Q9HCG8 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC31.04■■■□□ 2.56
CWC22Q9HCG8 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC31.03■■■□□ 2.56
CWC22Q9HCG8 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC31.03■■■□□ 2.56
CWC22Q9HCG8 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC31.03■■■□□ 2.56
CWC22Q9HCG8 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC31.03■■■□□ 2.56
CWC22Q9HCG8 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC31.03■■■□□ 2.56
CWC22Q9HCG8 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC31.02■■■□□ 2.56
CWC22Q9HCG8 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC31.02■■■□□ 2.56
CWC22Q9HCG8 AC108673.1-201ENST00000510422 1159 ntBASIC31.01■■■□□ 2.55
CWC22Q9HCG8 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC31■■■□□ 2.55
CWC22Q9HCG8 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC31■■■□□ 2.55
CWC22Q9HCG8 RPS2-202ENST00000526522 924 ntTSL 2 BASIC30.99■■■□□ 2.55
CWC22Q9HCG8 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC30.99■■■□□ 2.55
CWC22Q9HCG8 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC30.98■■■□□ 2.55
CWC22Q9HCG8 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC30.98■■■□□ 2.55
CWC22Q9HCG8 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC30.97■■■□□ 2.55
CWC22Q9HCG8 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC30.97■■■□□ 2.55
CWC22Q9HCG8 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC30.96■■■□□ 2.55
CWC22Q9HCG8 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC30.96■■■□□ 2.55
CWC22Q9HCG8 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC30.96■■■□□ 2.55
CWC22Q9HCG8 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC30.95■■■□□ 2.55
CWC22Q9HCG8 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC30.95■■■□□ 2.55
CWC22Q9HCG8 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC30.95■■■□□ 2.55
CWC22Q9HCG8 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC30.95■■■□□ 2.54
CWC22Q9HCG8 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC30.95■■■□□ 2.54
CWC22Q9HCG8 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC30.94■■■□□ 2.54
CWC22Q9HCG8 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC30.93■■■□□ 2.54
CWC22Q9HCG8 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC30.93■■■□□ 2.54
CWC22Q9HCG8 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC30.93■■■□□ 2.54
CWC22Q9HCG8 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC30.93■■■□□ 2.54
CWC22Q9HCG8 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC30.93■■■□□ 2.54
CWC22Q9HCG8 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC30.93■■■□□ 2.54
Retrieved 100 of 98,524 protein–RNA pairs in 19.7 ms