Protein–RNA interactions for Protein: Q9H788

SH2D4A, SH2 domain-containing protein 4A, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D4AQ9H788 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC30.56■■■□□ 2.48
SH2D4AQ9H788 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC30.55■■■□□ 2.48
SH2D4AQ9H788 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC30.55■■■□□ 2.48
SH2D4AQ9H788 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC30.55■■■□□ 2.48
SH2D4AQ9H788 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC30.55■■■□□ 2.48
SH2D4AQ9H788 CHML-204ENST00000638121 920 ntTSL 2 BASIC30.54■■■□□ 2.48
SH2D4AQ9H788 LINC00273-201ENST00000539813 1452 ntBASIC30.54■■■□□ 2.48
SH2D4AQ9H788 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC30.54■■■□□ 2.48
SH2D4AQ9H788 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC30.53■■■□□ 2.48
SH2D4AQ9H788 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC30.53■■■□□ 2.48
SH2D4AQ9H788 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC30.52■■■□□ 2.48
SH2D4AQ9H788 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC30.52■■■□□ 2.48
SH2D4AQ9H788 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC30.52■■■□□ 2.48
SH2D4AQ9H788 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC30.52■■■□□ 2.48
SH2D4AQ9H788 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC30.51■■■□□ 2.48
SH2D4AQ9H788 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC30.51■■■□□ 2.47
SH2D4AQ9H788 CERS1-201ENST00000429504 2094 ntTSL 1 (best) BASIC30.5■■■□□ 2.47
SH2D4AQ9H788 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC30.5■■■□□ 2.47
SH2D4AQ9H788 HES6-205ENST00000409356 528 ntTSL 2 BASIC30.49■■■□□ 2.47
SH2D4AQ9H788 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC30.49■■■□□ 2.47
SH2D4AQ9H788 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC30.49■■■□□ 2.47
SH2D4AQ9H788 TUSC1-201ENST00000358022 2052 ntAPPRIS P1 BASIC30.48■■■□□ 2.47
SH2D4AQ9H788 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC30.48■■■□□ 2.47
SH2D4AQ9H788 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC30.47■■■□□ 2.47
SH2D4AQ9H788 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC30.46■■■□□ 2.47
SH2D4AQ9H788 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC30.45■■■□□ 2.47
SH2D4AQ9H788 TXNRD2-204ENST00000400521 2115 ntAPPRIS P2 TSL 1 (best) BASIC30.45■■■□□ 2.47
SH2D4AQ9H788 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC30.45■■■□□ 2.46
SH2D4AQ9H788 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC30.45■■■□□ 2.46
SH2D4AQ9H788 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC30.44■■■□□ 2.46
SH2D4AQ9H788 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC30.44■■■□□ 2.46
SH2D4AQ9H788 CERS2-201ENST00000271688 2544 ntAPPRIS P1 TSL 5 BASIC30.43■■■□□ 2.46
SH2D4AQ9H788 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC30.43■■■□□ 2.46
SH2D4AQ9H788 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC30.43■■■□□ 2.46
SH2D4AQ9H788 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC30.43■■■□□ 2.46
SH2D4AQ9H788 ZBTB7A-202ENST00000601588 2083 ntAPPRIS P1 TSL 1 (best) BASIC30.43■■■□□ 2.46
SH2D4AQ9H788 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC30.42■■■□□ 2.46
SH2D4AQ9H788 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC30.41■■■□□ 2.46
SH2D4AQ9H788 LFNG-201ENST00000222725 2377 ntAPPRIS P4 TSL 5 BASIC30.4■■■□□ 2.46
SH2D4AQ9H788 METRNL-202ENST00000570778 967 ntTSL 5 BASIC30.4■■■□□ 2.46
SH2D4AQ9H788 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC30.4■■■□□ 2.46
SH2D4AQ9H788 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC30.4■■■□□ 2.46
SH2D4AQ9H788 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC30.39■■■□□ 2.46
SH2D4AQ9H788 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC30.39■■■□□ 2.46
SH2D4AQ9H788 AL135925.1-201ENST00000605920 1701 ntBASIC30.39■■■□□ 2.45
SH2D4AQ9H788 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC30.38■■■□□ 2.45
SH2D4AQ9H788 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC30.37■■■□□ 2.45
SH2D4AQ9H788 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC30.37■■■□□ 2.45
SH2D4AQ9H788 GLT8D1-201ENST00000266014 1849 ntAPPRIS P1 TSL 1 (best) BASIC30.36■■■□□ 2.45
SH2D4AQ9H788 AC127502.1-201ENST00000399971 1502 ntBASIC30.36■■■□□ 2.45
SH2D4AQ9H788 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC30.36■■■□□ 2.45
SH2D4AQ9H788 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC30.36■■■□□ 2.45
SH2D4AQ9H788 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC30.36■■■□□ 2.45
SH2D4AQ9H788 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC30.35■■■□□ 2.45
SH2D4AQ9H788 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC30.35■■■□□ 2.45
SH2D4AQ9H788 CHST11-202ENST00000546689 756 ntTSL 2 BASIC30.34■■■□□ 2.45
SH2D4AQ9H788 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC30.32■■■□□ 2.44
SH2D4AQ9H788 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC30.31■■■□□ 2.44
SH2D4AQ9H788 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC30.3■■■□□ 2.44
SH2D4AQ9H788 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC30.29■■■□□ 2.44
SH2D4AQ9H788 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC30.29■■■□□ 2.44
SH2D4AQ9H788 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC30.29■■■□□ 2.44
SH2D4AQ9H788 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC30.28■■■□□ 2.44
SH2D4AQ9H788 HSD17B1P1-201ENST00000590052 955 ntBASIC30.28■■■□□ 2.44
SH2D4AQ9H788 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC30.27■■■□□ 2.44
SH2D4AQ9H788 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC30.27■■■□□ 2.44
SH2D4AQ9H788 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC30.24■■■□□ 2.43
SH2D4AQ9H788 AC135983.2-203ENST00000454486 1613 ntBASIC30.23■■■□□ 2.43
SH2D4AQ9H788 ABHD17AP3-201ENST00000503096 1137 ntBASIC30.23■■■□□ 2.43
SH2D4AQ9H788 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC30.23■■■□□ 2.43
SH2D4AQ9H788 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC30.23■■■□□ 2.43
SH2D4AQ9H788 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC30.23■■■□□ 2.43
SH2D4AQ9H788 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC30.22■■■□□ 2.43
SH2D4AQ9H788 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC30.22■■■□□ 2.43
SH2D4AQ9H788 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC30.22■■■□□ 2.43
SH2D4AQ9H788 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC30.22■■■□□ 2.43
SH2D4AQ9H788 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC30.21■■■□□ 2.43
SH2D4AQ9H788 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC30.21■■■□□ 2.43
SH2D4AQ9H788 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC30.21■■■□□ 2.43
SH2D4AQ9H788 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC30.21■■■□□ 2.43
SH2D4AQ9H788 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC30.21■■■□□ 2.43
SH2D4AQ9H788 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC30.21■■■□□ 2.43
SH2D4AQ9H788 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC30.21■■■□□ 2.43
SH2D4AQ9H788 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC30.21■■■□□ 2.43
SH2D4AQ9H788 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC30.21■■■□□ 2.43
SH2D4AQ9H788 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC30.21■■■□□ 2.43
SH2D4AQ9H788 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC30.21■■■□□ 2.43
SH2D4AQ9H788 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC30.19■■■□□ 2.42
SH2D4AQ9H788 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC30.19■■■□□ 2.42
SH2D4AQ9H788 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC30.19■■■□□ 2.42
SH2D4AQ9H788 WHAMMP2-203ENST00000563942 1603 ntBASIC30.18■■■□□ 2.42
SH2D4AQ9H788 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC30.18■■■□□ 2.42
SH2D4AQ9H788 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC30.18■■■□□ 2.42
SH2D4AQ9H788 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC30.18■■■□□ 2.42
SH2D4AQ9H788 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC30.18■■■□□ 2.42
SH2D4AQ9H788 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC30.18■■■□□ 2.42
SH2D4AQ9H788 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC30.18■■■□□ 2.42
SH2D4AQ9H788 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC30.18■■■□□ 2.42
SH2D4AQ9H788 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC30.18■■■□□ 2.42
SH2D4AQ9H788 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC30.17■■■□□ 2.42
Retrieved 100 of 98,524 protein–RNA pairs in 83.6 ms