Protein–RNA interactions for Protein: Q99500

S1PR3, Sphingosine 1-phosphate receptor 3, humanhuman

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
S1PR3Q99500 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
S1PR3Q99500 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC21.26■□□□□ 0.99
S1PR3Q99500 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC21.26■□□□□ 0.99
S1PR3Q99500 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
S1PR3Q99500 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
S1PR3Q99500 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
S1PR3Q99500 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC21.24■□□□□ 0.99
S1PR3Q99500 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
S1PR3Q99500 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
S1PR3Q99500 RPS2-209ENST00000529806 993 ntTSL 3 BASIC21.23■□□□□ 0.99
S1PR3Q99500 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
S1PR3Q99500 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
S1PR3Q99500 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
S1PR3Q99500 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
S1PR3Q99500 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC21.21■□□□□ 0.99
S1PR3Q99500 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
S1PR3Q99500 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC21.2■□□□□ 0.98
S1PR3Q99500 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
S1PR3Q99500 AC142086.6-201ENST00000621154 1765 ntBASIC21.19■□□□□ 0.98
S1PR3Q99500 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC21.19■□□□□ 0.98
S1PR3Q99500 AC005559.1-201ENST00000589661 871 ntBASIC21.19■□□□□ 0.98
S1PR3Q99500 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
S1PR3Q99500 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC21.19■□□□□ 0.98
S1PR3Q99500 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
S1PR3Q99500 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
S1PR3Q99500 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC21.19■□□□□ 0.98
S1PR3Q99500 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
S1PR3Q99500 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC21.18■□□□□ 0.98
S1PR3Q99500 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
S1PR3Q99500 AP006261.1-201ENST00000584783 668 ntBASIC21.17■□□□□ 0.98
S1PR3Q99500 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC21.16■□□□□ 0.98
S1PR3Q99500 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
S1PR3Q99500 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
S1PR3Q99500 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
S1PR3Q99500 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC21.15■□□□□ 0.98
S1PR3Q99500 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
S1PR3Q99500 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
S1PR3Q99500 MIR3665-201ENST00000578708 105 ntBASIC21.14■□□□□ 0.97
S1PR3Q99500 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC21.14■□□□□ 0.97
S1PR3Q99500 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
S1PR3Q99500 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
S1PR3Q99500 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
S1PR3Q99500 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
S1PR3Q99500 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
S1PR3Q99500 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC21.13■□□□□ 0.97
S1PR3Q99500 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
S1PR3Q99500 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
S1PR3Q99500 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC21.12■□□□□ 0.97
S1PR3Q99500 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC21.12■□□□□ 0.97
S1PR3Q99500 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
S1PR3Q99500 AP004833.2-201ENST00000532228 1454 ntBASIC21.12■□□□□ 0.97
S1PR3Q99500 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
S1PR3Q99500 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
S1PR3Q99500 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC21.11■□□□□ 0.97
S1PR3Q99500 DUX4L28-201ENST00000623687 678 ntBASIC21.11■□□□□ 0.97
S1PR3Q99500 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
S1PR3Q99500 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC21.11■□□□□ 0.97
S1PR3Q99500 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
S1PR3Q99500 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
S1PR3Q99500 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
S1PR3Q99500 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC21.1■□□□□ 0.97
S1PR3Q99500 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
S1PR3Q99500 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
S1PR3Q99500 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
S1PR3Q99500 AC127502.1-201ENST00000399971 1502 ntBASIC21.09■□□□□ 0.97
S1PR3Q99500 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
S1PR3Q99500 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
S1PR3Q99500 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC21.09■□□□□ 0.97
S1PR3Q99500 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
S1PR3Q99500 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
S1PR3Q99500 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
S1PR3Q99500 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC21.08■□□□□ 0.97
S1PR3Q99500 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC21.08■□□□□ 0.97
S1PR3Q99500 DRD5P2-201ENST00000421395 2012 ntBASIC21.07■□□□□ 0.96
S1PR3Q99500 AL162393.1-201ENST00000437852 946 ntBASIC21.07■□□□□ 0.96
S1PR3Q99500 NRG1-221ENST00000614767 762 ntTSL 5 BASIC21.07■□□□□ 0.96
S1PR3Q99500 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC21.07■□□□□ 0.96
S1PR3Q99500 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
S1PR3Q99500 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
S1PR3Q99500 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC21.06■□□□□ 0.96
S1PR3Q99500 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
S1PR3Q99500 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
S1PR3Q99500 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC21.05■□□□□ 0.96
S1PR3Q99500 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC21.05■□□□□ 0.96
S1PR3Q99500 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC21.05■□□□□ 0.96
S1PR3Q99500 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
S1PR3Q99500 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC21.04■□□□□ 0.96
S1PR3Q99500 AC108673.1-201ENST00000510422 1159 ntBASIC21.04■□□□□ 0.96
S1PR3Q99500 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC21.04■□□□□ 0.96
S1PR3Q99500 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
S1PR3Q99500 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC21.03■□□□□ 0.96
S1PR3Q99500 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC21.03■□□□□ 0.96
S1PR3Q99500 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
S1PR3Q99500 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC21.02■□□□□ 0.96
S1PR3Q99500 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC21.02■□□□□ 0.96
S1PR3Q99500 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
S1PR3Q99500 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
S1PR3Q99500 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
S1PR3Q99500 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
S1PR3Q99500 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 15.5 ms