Protein–RNA interactions for Protein: Q96BP2

CHCHD1, Coiled-coil-helix-coiled-coil-helix domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD1Q96BP2 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
CHCHD1Q96BP2 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CHCHD1Q96BP2 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC18.99■□□□□ 0.63
CHCHD1Q96BP2 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CHCHD1Q96BP2 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CHCHD1Q96BP2 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CHCHD1Q96BP2 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC18.97■□□□□ 0.63
CHCHD1Q96BP2 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC18.97■□□□□ 0.63
CHCHD1Q96BP2 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CHCHD1Q96BP2 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CHCHD1Q96BP2 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
CHCHD1Q96BP2 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
CHCHD1Q96BP2 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CHCHD1Q96BP2 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC18.95■□□□□ 0.62
CHCHD1Q96BP2 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
CHCHD1Q96BP2 INO80B-201ENST00000233331 1261 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CHCHD1Q96BP2 FAM89A-201ENST00000366654 1495 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CHCHD1Q96BP2 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CHCHD1Q96BP2 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC18.94■□□□□ 0.62
CHCHD1Q96BP2 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
CHCHD1Q96BP2 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC18.93■□□□□ 0.62
CHCHD1Q96BP2 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
CHCHD1Q96BP2 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CHCHD1Q96BP2 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
CHCHD1Q96BP2 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CHCHD1Q96BP2 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
CHCHD1Q96BP2 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC18.93■□□□□ 0.62
CHCHD1Q96BP2 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC18.92■□□□□ 0.62
CHCHD1Q96BP2 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CHCHD1Q96BP2 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
CHCHD1Q96BP2 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CHCHD1Q96BP2 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CHCHD1Q96BP2 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CHCHD1Q96BP2 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CHCHD1Q96BP2 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
CHCHD1Q96BP2 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CHCHD1Q96BP2 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
CHCHD1Q96BP2 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC18.91■□□□□ 0.62
CHCHD1Q96BP2 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CHCHD1Q96BP2 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC18.9■□□□□ 0.62
CHCHD1Q96BP2 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
CHCHD1Q96BP2 RASSF7-201ENST00000397582 1731 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
CHCHD1Q96BP2 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
CHCHD1Q96BP2 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
CHCHD1Q96BP2 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CHCHD1Q96BP2 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
CHCHD1Q96BP2 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CHCHD1Q96BP2 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC18.86■□□□□ 0.61
CHCHD1Q96BP2 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC18.86■□□□□ 0.61
CHCHD1Q96BP2 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CHCHD1Q96BP2 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC18.86■□□□□ 0.61
CHCHD1Q96BP2 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CHCHD1Q96BP2 CMTM4-202ENST00000394106 1187 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CHCHD1Q96BP2 CMTM4-204ENST00000563952 1023 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CHCHD1Q96BP2 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC18.86■□□□□ 0.61
CHCHD1Q96BP2 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
CHCHD1Q96BP2 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC18.86■□□□□ 0.61
CHCHD1Q96BP2 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CHCHD1Q96BP2 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CHCHD1Q96BP2 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CHCHD1Q96BP2 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CHCHD1Q96BP2 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC18.85■□□□□ 0.61
CHCHD1Q96BP2 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC18.85■□□□□ 0.61
CHCHD1Q96BP2 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC18.84■□□□□ 0.61
CHCHD1Q96BP2 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC18.84■□□□□ 0.61
CHCHD1Q96BP2 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
CHCHD1Q96BP2 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
CHCHD1Q96BP2 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC18.83■□□□□ 0.61
CHCHD1Q96BP2 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
CHCHD1Q96BP2 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.61
CHCHD1Q96BP2 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.61
CHCHD1Q96BP2 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
CHCHD1Q96BP2 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CHCHD1Q96BP2 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
CHCHD1Q96BP2 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CHCHD1Q96BP2 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
CHCHD1Q96BP2 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CHCHD1Q96BP2 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CHCHD1Q96BP2 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC18.82■□□□□ 0.6
CHCHD1Q96BP2 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CHCHD1Q96BP2 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC18.82■□□□□ 0.6
CHCHD1Q96BP2 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC18.82■□□□□ 0.6
CHCHD1Q96BP2 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CHCHD1Q96BP2 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CHCHD1Q96BP2 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CHCHD1Q96BP2 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
CHCHD1Q96BP2 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
CHCHD1Q96BP2 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CHCHD1Q96BP2 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CHCHD1Q96BP2 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CHCHD1Q96BP2 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
CHCHD1Q96BP2 LTK-203ENST00000453182 2412 ntTSL 2 BASIC18.8■□□□□ 0.6
CHCHD1Q96BP2 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CHCHD1Q96BP2 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CHCHD1Q96BP2 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC18.79■□□□□ 0.6
CHCHD1Q96BP2 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CHCHD1Q96BP2 MVK-208ENST00000539696 608 ntTSL 5 BASIC18.78■□□□□ 0.6
CHCHD1Q96BP2 HAGHL-204ENST00000549114 1820 ntTSL 5 BASIC18.78■□□□□ 0.6
CHCHD1Q96BP2 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CHCHD1Q96BP2 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC18.78■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms