Protein–RNA interactions for Protein: Q8WV60

PTCD2, Pentatricopeptide repeat-containing protein 2, mitochondrial, humanhuman

Known RBP Predictions only

Length 388 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2Q8WV60 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC26.3■■□□□ 1.8
PTCD2Q8WV60 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC26.3■■□□□ 1.8
PTCD2Q8WV60 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC26.3■■□□□ 1.8
PTCD2Q8WV60 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
PTCD2Q8WV60 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
PTCD2Q8WV60 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
PTCD2Q8WV60 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC26.27■■□□□ 1.8
PTCD2Q8WV60 SHF-206ENST00000560471 2499 ntTSL 5 BASIC26.27■■□□□ 1.8
PTCD2Q8WV60 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
PTCD2Q8WV60 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
PTCD2Q8WV60 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC26.26■■□□□ 1.79
PTCD2Q8WV60 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
PTCD2Q8WV60 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC26.25■■□□□ 1.79
PTCD2Q8WV60 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC26.25■■□□□ 1.79
PTCD2Q8WV60 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC26.25■■□□□ 1.79
PTCD2Q8WV60 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
PTCD2Q8WV60 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC26.24■■□□□ 1.79
PTCD2Q8WV60 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC26.24■■□□□ 1.79
PTCD2Q8WV60 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC26.23■■□□□ 1.79
PTCD2Q8WV60 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
PTCD2Q8WV60 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC26.23■■□□□ 1.79
PTCD2Q8WV60 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC26.22■■□□□ 1.79
PTCD2Q8WV60 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
PTCD2Q8WV60 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC26.21■■□□□ 1.79
PTCD2Q8WV60 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
PTCD2Q8WV60 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
PTCD2Q8WV60 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
PTCD2Q8WV60 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
PTCD2Q8WV60 MIR6090-201ENST00000622481 60 ntBASIC26.2■■□□□ 1.78
PTCD2Q8WV60 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
PTCD2Q8WV60 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC26.2■■□□□ 1.78
PTCD2Q8WV60 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
PTCD2Q8WV60 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
PTCD2Q8WV60 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC26.19■■□□□ 1.78
PTCD2Q8WV60 BOD1-206ENST00000480951 814 ntTSL 2 BASIC26.19■■□□□ 1.78
PTCD2Q8WV60 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
PTCD2Q8WV60 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
PTCD2Q8WV60 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
PTCD2Q8WV60 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC26.17■■□□□ 1.78
PTCD2Q8WV60 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC26.17■■□□□ 1.78
PTCD2Q8WV60 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
PTCD2Q8WV60 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC26.16■■□□□ 1.78
PTCD2Q8WV60 ABHD17AP4-201ENST00000411545 909 ntBASIC26.16■■□□□ 1.78
PTCD2Q8WV60 AP004833.2-201ENST00000532228 1454 ntBASIC26.14■■□□□ 1.78
PTCD2Q8WV60 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
PTCD2Q8WV60 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC26.13■■□□□ 1.77
PTCD2Q8WV60 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC26.12■■□□□ 1.77
PTCD2Q8WV60 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC26.12■■□□□ 1.77
PTCD2Q8WV60 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
PTCD2Q8WV60 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
PTCD2Q8WV60 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC26.11■■□□□ 1.77
PTCD2Q8WV60 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC26.11■■□□□ 1.77
PTCD2Q8WV60 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC26.11■■□□□ 1.77
PTCD2Q8WV60 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC26.11■■□□□ 1.77
PTCD2Q8WV60 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC26.11■■□□□ 1.77
PTCD2Q8WV60 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC26.11■■□□□ 1.77
PTCD2Q8WV60 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC26.1■■□□□ 1.77
PTCD2Q8WV60 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
PTCD2Q8WV60 MLEC-202ENST00000412616 841 ntTSL 3 BASIC26.09■■□□□ 1.77
PTCD2Q8WV60 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC26.09■■□□□ 1.77
PTCD2Q8WV60 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC26.09■■□□□ 1.77
PTCD2Q8WV60 AC127502.1-201ENST00000399971 1502 ntBASIC26.09■■□□□ 1.77
PTCD2Q8WV60 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC26.08■■□□□ 1.77
PTCD2Q8WV60 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC26.07■■□□□ 1.76
PTCD2Q8WV60 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC26.07■■□□□ 1.76
PTCD2Q8WV60 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC26.07■■□□□ 1.76
PTCD2Q8WV60 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC26.07■■□□□ 1.76
PTCD2Q8WV60 AC108673.1-201ENST00000510422 1159 ntBASIC26.07■■□□□ 1.76
PTCD2Q8WV60 HGH1-207ENST00000628266 258 ntTSL 5 BASIC26.07■■□□□ 1.76
PTCD2Q8WV60 AC142086.6-201ENST00000621154 1765 ntBASIC26.07■■□□□ 1.76
PTCD2Q8WV60 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC26.06■■□□□ 1.76
PTCD2Q8WV60 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC26.06■■□□□ 1.76
PTCD2Q8WV60 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC26.05■■□□□ 1.76
PTCD2Q8WV60 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC26.05■■□□□ 1.76
PTCD2Q8WV60 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC26.05■■□□□ 1.76
PTCD2Q8WV60 AC021231.2-201ENST00000594613 730 ntBASIC26.05■■□□□ 1.76
PTCD2Q8WV60 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC26.05■■□□□ 1.76
PTCD2Q8WV60 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
PTCD2Q8WV60 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC26.04■■□□□ 1.76
PTCD2Q8WV60 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC26.04■■□□□ 1.76
PTCD2Q8WV60 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
PTCD2Q8WV60 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC26.03■■□□□ 1.76
PTCD2Q8WV60 CIB2-204ENST00000557846 934 ntTSL 3 BASIC26.03■■□□□ 1.76
PTCD2Q8WV60 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC26.03■■□□□ 1.76
PTCD2Q8WV60 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC26.02■■□□□ 1.76
PTCD2Q8WV60 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC26.02■■□□□ 1.76
PTCD2Q8WV60 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC26.02■■□□□ 1.76
PTCD2Q8WV60 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
PTCD2Q8WV60 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
PTCD2Q8WV60 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC26.01■■□□□ 1.75
PTCD2Q8WV60 MIR7108-201ENST00000614319 87 ntBASIC26.01■■□□□ 1.75
PTCD2Q8WV60 DRD5P2-201ENST00000421395 2012 ntBASIC26■■□□□ 1.75
PTCD2Q8WV60 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
PTCD2Q8WV60 DUX4L29-201ENST00000425409 679 ntBASIC26■■□□□ 1.75
PTCD2Q8WV60 ZNRF2P2-203ENST00000454624 420 ntBASIC26■■□□□ 1.75
PTCD2Q8WV60 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC26■■□□□ 1.75
PTCD2Q8WV60 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC26■■□□□ 1.75
PTCD2Q8WV60 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC26■■□□□ 1.75
PTCD2Q8WV60 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC25.99■■□□□ 1.75
PTCD2Q8WV60 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC25.99■■□□□ 1.75
Retrieved 100 of 98,524 protein–RNA pairs in 45.3 ms