Protein–RNA interactions for Protein: Q8TE82

SH3TC1, SH3 domain and tetratricopeptide repeat-containing protein 1, humanhuman

Predictions only

Length 1,336 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3TC1Q8TE82 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC32.85■■■□□ 2.85
SH3TC1Q8TE82 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC32.84■■■□□ 2.85
SH3TC1Q8TE82 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC32.84■■■□□ 2.85
SH3TC1Q8TE82 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC32.84■■■□□ 2.85
SH3TC1Q8TE82 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC32.84■■■□□ 2.85
SH3TC1Q8TE82 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC32.84■■■□□ 2.85
SH3TC1Q8TE82 HSD17B1P1-201ENST00000590052 955 ntBASIC32.83■■■□□ 2.85
SH3TC1Q8TE82 LINC00273-201ENST00000539813 1452 ntBASIC32.83■■■□□ 2.85
SH3TC1Q8TE82 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC32.83■■■□□ 2.85
SH3TC1Q8TE82 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC32.83■■■□□ 2.85
SH3TC1Q8TE82 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC32.81■■■□□ 2.84
SH3TC1Q8TE82 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC32.8■■■□□ 2.84
SH3TC1Q8TE82 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC32.8■■■□□ 2.84
SH3TC1Q8TE82 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC32.8■■■□□ 2.84
SH3TC1Q8TE82 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC32.8■■■□□ 2.84
SH3TC1Q8TE82 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC32.79■■■□□ 2.84
SH3TC1Q8TE82 GLT8D1-201ENST00000266014 1849 ntAPPRIS P1 TSL 1 (best) BASIC32.79■■■□□ 2.84
SH3TC1Q8TE82 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC32.79■■■□□ 2.84
SH3TC1Q8TE82 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC32.78■■■□□ 2.84
SH3TC1Q8TE82 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC32.78■■■□□ 2.84
SH3TC1Q8TE82 ST7-208ENST00000393451 2110 ntAPPRIS P1 TSL 1 (best) BASIC32.76■■■□□ 2.83
SH3TC1Q8TE82 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC32.75■■■□□ 2.83
SH3TC1Q8TE82 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC32.74■■■□□ 2.83
SH3TC1Q8TE82 ABHD17AP3-201ENST00000503096 1137 ntBASIC32.73■■■□□ 2.83
SH3TC1Q8TE82 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC32.71■■■□□ 2.83
SH3TC1Q8TE82 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC32.71■■■□□ 2.83
SH3TC1Q8TE82 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC32.71■■■□□ 2.83
SH3TC1Q8TE82 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC32.71■■■□□ 2.83
SH3TC1Q8TE82 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC32.7■■■□□ 2.83
SH3TC1Q8TE82 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC32.69■■■□□ 2.82
SH3TC1Q8TE82 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC32.69■■■□□ 2.82
SH3TC1Q8TE82 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC32.69■■■□□ 2.82
SH3TC1Q8TE82 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC32.69■■■□□ 2.82
SH3TC1Q8TE82 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC32.69■■■□□ 2.82
SH3TC1Q8TE82 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC32.68■■■□□ 2.82
SH3TC1Q8TE82 CHST11-202ENST00000546689 756 ntTSL 2 BASIC32.67■■■□□ 2.82
SH3TC1Q8TE82 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC32.67■■■□□ 2.82
SH3TC1Q8TE82 BRD4-212ENST00000630599 726 ntTSL 2 BASIC32.67■■■□□ 2.82
SH3TC1Q8TE82 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC32.66■■■□□ 2.82
SH3TC1Q8TE82 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC32.66■■■□□ 2.82
SH3TC1Q8TE82 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC32.66■■■□□ 2.82
SH3TC1Q8TE82 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC32.66■■■□□ 2.82
SH3TC1Q8TE82 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC32.65■■■□□ 2.82
SH3TC1Q8TE82 CERS2-201ENST00000271688 2544 ntAPPRIS P1 TSL 5 BASIC32.64■■■□□ 2.82
SH3TC1Q8TE82 TPRG1L-202ENST00000378344 2414 ntAPPRIS P1 TSL 2 BASIC32.63■■■□□ 2.81
SH3TC1Q8TE82 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC32.63■■■□□ 2.81
SH3TC1Q8TE82 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC32.63■■■□□ 2.81
SH3TC1Q8TE82 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC32.63■■■□□ 2.81
SH3TC1Q8TE82 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC32.63■■■□□ 2.81
SH3TC1Q8TE82 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC32.62■■■□□ 2.81
SH3TC1Q8TE82 AC127502.1-201ENST00000399971 1502 ntBASIC32.61■■■□□ 2.81
SH3TC1Q8TE82 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC32.6■■■□□ 2.81
SH3TC1Q8TE82 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC32.6■■■□□ 2.81
SH3TC1Q8TE82 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC32.59■■■□□ 2.81
SH3TC1Q8TE82 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC32.59■■■□□ 2.81
SH3TC1Q8TE82 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC32.59■■■□□ 2.81
SH3TC1Q8TE82 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC32.59■■■□□ 2.81
SH3TC1Q8TE82 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC32.59■■■□□ 2.81
SH3TC1Q8TE82 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC32.59■■■□□ 2.81
SH3TC1Q8TE82 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC32.59■■■□□ 2.81
SH3TC1Q8TE82 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC32.59■■■□□ 2.81
SH3TC1Q8TE82 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC32.59■■■□□ 2.81
SH3TC1Q8TE82 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC32.59■■■□□ 2.81
SH3TC1Q8TE82 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC32.59■■■□□ 2.81
SH3TC1Q8TE82 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC32.59■■■□□ 2.81
SH3TC1Q8TE82 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC32.59■■■□□ 2.81
SH3TC1Q8TE82 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC32.58■■■□□ 2.81
SH3TC1Q8TE82 SRP68-213ENST00000629930 165 ntTSL 5 BASIC32.58■■■□□ 2.81
SH3TC1Q8TE82 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC32.57■■■□□ 2.8
SH3TC1Q8TE82 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC32.57■■■□□ 2.8
SH3TC1Q8TE82 LFNG-201ENST00000222725 2377 ntAPPRIS P4 TSL 5 BASIC32.56■■■□□ 2.8
SH3TC1Q8TE82 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC32.56■■■□□ 2.8
SH3TC1Q8TE82 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC32.56■■■□□ 2.8
SH3TC1Q8TE82 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC32.56■■■□□ 2.8
SH3TC1Q8TE82 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC32.55■■■□□ 2.8
SH3TC1Q8TE82 AL135925.1-201ENST00000605920 1701 ntBASIC32.55■■■□□ 2.8
SH3TC1Q8TE82 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC32.54■■■□□ 2.8
SH3TC1Q8TE82 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC32.54■■■□□ 2.8
SH3TC1Q8TE82 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC32.53■■■□□ 2.8
SH3TC1Q8TE82 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC32.52■■■□□ 2.8
SH3TC1Q8TE82 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC32.51■■■□□ 2.79
SH3TC1Q8TE82 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC32.5■■■□□ 2.79
SH3TC1Q8TE82 AC135983.2-203ENST00000454486 1613 ntBASIC32.5■■■□□ 2.79
SH3TC1Q8TE82 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC32.49■■■□□ 2.79
SH3TC1Q8TE82 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC32.49■■■□□ 2.79
SH3TC1Q8TE82 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC32.49■■■□□ 2.79
SH3TC1Q8TE82 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC32.48■■■□□ 2.79
SH3TC1Q8TE82 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC32.47■■■□□ 2.79
SH3TC1Q8TE82 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC32.47■■■□□ 2.79
SH3TC1Q8TE82 WHAMMP2-203ENST00000563942 1603 ntBASIC32.47■■■□□ 2.79
SH3TC1Q8TE82 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC32.46■■■□□ 2.79
SH3TC1Q8TE82 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC32.46■■■□□ 2.79
SH3TC1Q8TE82 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC32.46■■■□□ 2.79
SH3TC1Q8TE82 ST7-205ENST00000393446 2114 ntTSL 5 BASIC32.46■■■□□ 2.79
SH3TC1Q8TE82 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC32.46■■■□□ 2.79
SH3TC1Q8TE82 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC32.46■■■□□ 2.79
SH3TC1Q8TE82 TXNRD2-204ENST00000400521 2115 ntAPPRIS P2 TSL 1 (best) BASIC32.45■■■□□ 2.79
SH3TC1Q8TE82 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC32.44■■■□□ 2.78
SH3TC1Q8TE82 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC32.43■■■□□ 2.78
SH3TC1Q8TE82 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC32.43■■■□□ 2.78
Retrieved 100 of 98,524 protein–RNA pairs in 84.6 ms