Protein–RNA interactions for Protein: Q8NDX2

SLC17A8, Vesicular glutamate transporter 3, humanhuman

Predictions only

Length 589 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC17A8Q8NDX2 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC29.24■■■□□ 2.27
SLC17A8Q8NDX2 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC29.24■■■□□ 2.27
SLC17A8Q8NDX2 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC29.24■■■□□ 2.27
SLC17A8Q8NDX2 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC29.23■■■□□ 2.27
SLC17A8Q8NDX2 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC29.23■■■□□ 2.27
SLC17A8Q8NDX2 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC29.23■■■□□ 2.27
SLC17A8Q8NDX2 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC29.22■■■□□ 2.27
SLC17A8Q8NDX2 CIB2-204ENST00000557846 934 ntTSL 3 BASIC29.22■■■□□ 2.27
SLC17A8Q8NDX2 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC29.22■■■□□ 2.27
SLC17A8Q8NDX2 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC29.21■■■□□ 2.27
SLC17A8Q8NDX2 SLC15A4-201ENST00000266771 2779 ntAPPRIS P1 TSL 1 (best) BASIC29.21■■■□□ 2.27
SLC17A8Q8NDX2 AL592295.1-201ENST00000400984 884 ntBASIC29.2■■■□□ 2.26
SLC17A8Q8NDX2 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC29.2■■■□□ 2.26
SLC17A8Q8NDX2 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC29.19■■■□□ 2.26
SLC17A8Q8NDX2 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC29.18■■■□□ 2.26
SLC17A8Q8NDX2 AL135925.1-201ENST00000605920 1701 ntBASIC29.17■■■□□ 2.26
SLC17A8Q8NDX2 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC29.17■■■□□ 2.26
SLC17A8Q8NDX2 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC29.17■■■□□ 2.26
SLC17A8Q8NDX2 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC29.17■■■□□ 2.26
SLC17A8Q8NDX2 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC29.16■■■□□ 2.26
SLC17A8Q8NDX2 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC29.16■■■□□ 2.26
SLC17A8Q8NDX2 LINC01971-201ENST00000617888 1048 ntBASIC29.16■■■□□ 2.26
SLC17A8Q8NDX2 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC29.15■■■□□ 2.26
SLC17A8Q8NDX2 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC29.15■■■□□ 2.26
SLC17A8Q8NDX2 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC29.14■■■□□ 2.26
SLC17A8Q8NDX2 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC29.14■■■□□ 2.26
SLC17A8Q8NDX2 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC29.12■■■□□ 2.25
SLC17A8Q8NDX2 METRNL-202ENST00000570778 967 ntTSL 5 BASIC29.12■■■□□ 2.25
SLC17A8Q8NDX2 NTF6A-201ENST00000591175 560 ntBASIC29.12■■■□□ 2.25
SLC17A8Q8NDX2 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC29.12■■■□□ 2.25
SLC17A8Q8NDX2 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC29.11■■■□□ 2.25
SLC17A8Q8NDX2 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC29.11■■■□□ 2.25
SLC17A8Q8NDX2 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC29.11■■■□□ 2.25
SLC17A8Q8NDX2 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC29.1■■■□□ 2.25
SLC17A8Q8NDX2 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC29.09■■■□□ 2.25
SLC17A8Q8NDX2 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC29.09■■■□□ 2.25
SLC17A8Q8NDX2 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC29.08■■■□□ 2.25
SLC17A8Q8NDX2 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC29.08■■■□□ 2.25
SLC17A8Q8NDX2 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC29.08■■■□□ 2.25
SLC17A8Q8NDX2 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC29.08■■■□□ 2.25
SLC17A8Q8NDX2 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC29.08■■■□□ 2.25
SLC17A8Q8NDX2 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC29.07■■■□□ 2.24
SLC17A8Q8NDX2 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC29.07■■■□□ 2.24
SLC17A8Q8NDX2 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC29.07■■■□□ 2.24
SLC17A8Q8NDX2 MIR935-201ENST00000401179 91 ntBASIC29.07■■■□□ 2.24
SLC17A8Q8NDX2 AC010864.1-201ENST00000609407 1511 ntBASIC29.07■■■□□ 2.24
SLC17A8Q8NDX2 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC29.06■■■□□ 2.24
SLC17A8Q8NDX2 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC29.06■■■□□ 2.24
SLC17A8Q8NDX2 RNF126P1-201ENST00000567452 1320 ntBASIC29.06■■■□□ 2.24
SLC17A8Q8NDX2 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC29.06■■■□□ 2.24
SLC17A8Q8NDX2 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC29.05■■■□□ 2.24
SLC17A8Q8NDX2 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC29.05■■■□□ 2.24
SLC17A8Q8NDX2 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC29.05■■■□□ 2.24
SLC17A8Q8NDX2 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC29.05■■■□□ 2.24
SLC17A8Q8NDX2 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC29.05■■■□□ 2.24
SLC17A8Q8NDX2 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC29.04■■■□□ 2.24
SLC17A8Q8NDX2 AL033527.3-201ENST00000566366 1196 ntBASIC29.04■■■□□ 2.24
SLC17A8Q8NDX2 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC29.04■■■□□ 2.24
SLC17A8Q8NDX2 ST7-AS1-201ENST00000456775 1889 ntBASIC29.04■■■□□ 2.24
SLC17A8Q8NDX2 GPX1-201ENST00000419349 1106 ntBASIC29.03■■■□□ 2.24
SLC17A8Q8NDX2 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC29.03■■■□□ 2.24
SLC17A8Q8NDX2 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC29.02■■■□□ 2.24
SLC17A8Q8NDX2 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC29.02■■■□□ 2.24
SLC17A8Q8NDX2 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC29.01■■■□□ 2.24
SLC17A8Q8NDX2 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC29.01■■■□□ 2.23
SLC17A8Q8NDX2 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC29■■■□□ 2.23
SLC17A8Q8NDX2 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC29■■■□□ 2.23
SLC17A8Q8NDX2 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC29■■■□□ 2.23
SLC17A8Q8NDX2 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC29■■■□□ 2.23
SLC17A8Q8NDX2 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC28.99■■■□□ 2.23
SLC17A8Q8NDX2 SRP68-213ENST00000629930 165 ntTSL 5 BASIC28.99■■■□□ 2.23
SLC17A8Q8NDX2 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC28.99■■■□□ 2.23
SLC17A8Q8NDX2 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC28.99■■■□□ 2.23
SLC17A8Q8NDX2 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC28.98■■■□□ 2.23
SLC17A8Q8NDX2 AC008813.1-201ENST00000536597 885 ntBASIC28.97■■■□□ 2.23
SLC17A8Q8NDX2 AC108673.1-201ENST00000510422 1159 ntBASIC28.96■■■□□ 2.23
SLC17A8Q8NDX2 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC28.96■■■□□ 2.23
SLC17A8Q8NDX2 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC28.96■■■□□ 2.23
SLC17A8Q8NDX2 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC28.95■■■□□ 2.22
SLC17A8Q8NDX2 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC28.95■■■□□ 2.22
SLC17A8Q8NDX2 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC28.95■■■□□ 2.22
SLC17A8Q8NDX2 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC28.95■■■□□ 2.22
SLC17A8Q8NDX2 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC28.95■■■□□ 2.22
SLC17A8Q8NDX2 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC28.95■■■□□ 2.22
SLC17A8Q8NDX2 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC28.95■■■□□ 2.22
SLC17A8Q8NDX2 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC28.95■■■□□ 2.22
SLC17A8Q8NDX2 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC28.94■■■□□ 2.22
SLC17A8Q8NDX2 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC28.94■■■□□ 2.22
SLC17A8Q8NDX2 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC28.92■■■□□ 2.22
SLC17A8Q8NDX2 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC28.92■■■□□ 2.22
SLC17A8Q8NDX2 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC28.91■■■□□ 2.22
SLC17A8Q8NDX2 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC28.91■■■□□ 2.22
SLC17A8Q8NDX2 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC28.91■■■□□ 2.22
SLC17A8Q8NDX2 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC28.91■■■□□ 2.22
SLC17A8Q8NDX2 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC28.91■■■□□ 2.22
SLC17A8Q8NDX2 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC28.91■■■□□ 2.22
SLC17A8Q8NDX2 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC28.91■■■□□ 2.22
SLC17A8Q8NDX2 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC28.91■■■□□ 2.22
SLC17A8Q8NDX2 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC28.91■■■□□ 2.22
SLC17A8Q8NDX2 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC28.9■■■□□ 2.22
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms