Protein–RNA interactions for Protein: Q8NAV1

PRPF38A, Pre-mRNA-splicing factor 38A, humanhuman

Known RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38AQ8NAV1 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC30.25■■■□□ 2.43
PRPF38AQ8NAV1 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC30.25■■■□□ 2.43
PRPF38AQ8NAV1 LINC00273-201ENST00000539813 1452 ntBASIC30.25■■■□□ 2.43
PRPF38AQ8NAV1 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC30.24■■■□□ 2.43
PRPF38AQ8NAV1 AC008105.3-203ENST00000591365 2238 ntTSL 2 BASIC30.23■■■□□ 2.43
PRPF38AQ8NAV1 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC30.23■■■□□ 2.43
PRPF38AQ8NAV1 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC30.23■■■□□ 2.43
PRPF38AQ8NAV1 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC30.23■■■□□ 2.43
PRPF38AQ8NAV1 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC30.23■■■□□ 2.43
PRPF38AQ8NAV1 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC30.23■■■□□ 2.43
PRPF38AQ8NAV1 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC30.23■■■□□ 2.43
PRPF38AQ8NAV1 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC30.23■■■□□ 2.43
PRPF38AQ8NAV1 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC30.22■■■□□ 2.43
PRPF38AQ8NAV1 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC30.22■■■□□ 2.43
PRPF38AQ8NAV1 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC30.21■■■□□ 2.43
PRPF38AQ8NAV1 HES6-205ENST00000409356 528 ntTSL 2 BASIC30.21■■■□□ 2.43
PRPF38AQ8NAV1 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC30.21■■■□□ 2.43
PRPF38AQ8NAV1 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC30.2■■■□□ 2.43
PRPF38AQ8NAV1 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC30.2■■■□□ 2.42
PRPF38AQ8NAV1 UBP1-201ENST00000283628 2074 ntAPPRIS P3 TSL 2 BASIC30.19■■■□□ 2.42
PRPF38AQ8NAV1 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC30.19■■■□□ 2.42
PRPF38AQ8NAV1 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC30.18■■■□□ 2.42
PRPF38AQ8NAV1 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC30.17■■■□□ 2.42
PRPF38AQ8NAV1 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC30.16■■■□□ 2.42
PRPF38AQ8NAV1 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC30.16■■■□□ 2.42
PRPF38AQ8NAV1 GLT8D1-201ENST00000266014 1849 ntAPPRIS P1 TSL 1 (best) BASIC30.15■■■□□ 2.42
PRPF38AQ8NAV1 CBX4-201ENST00000269397 2664 ntAPPRIS P2 TSL 1 (best) BASIC30.15■■■□□ 2.42
PRPF38AQ8NAV1 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC30.15■■■□□ 2.42
PRPF38AQ8NAV1 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC30.15■■■□□ 2.42
PRPF38AQ8NAV1 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC30.15■■■□□ 2.42
PRPF38AQ8NAV1 METRNL-202ENST00000570778 967 ntTSL 5 BASIC30.15■■■□□ 2.42
PRPF38AQ8NAV1 AL135925.1-201ENST00000605920 1701 ntBASIC30.15■■■□□ 2.42
PRPF38AQ8NAV1 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC30.13■■■□□ 2.41
PRPF38AQ8NAV1 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC30.13■■■□□ 2.41
PRPF38AQ8NAV1 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC30.11■■■□□ 2.41
PRPF38AQ8NAV1 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC30.11■■■□□ 2.41
PRPF38AQ8NAV1 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC30.11■■■□□ 2.41
PRPF38AQ8NAV1 SEPT3-203ENST00000396426 2586 ntAPPRIS P4 TSL 1 (best) BASIC30.1■■■□□ 2.41
PRPF38AQ8NAV1 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC30.1■■■□□ 2.41
PRPF38AQ8NAV1 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC30.1■■■□□ 2.41
PRPF38AQ8NAV1 AC127502.1-201ENST00000399971 1502 ntBASIC30.09■■■□□ 2.41
PRPF38AQ8NAV1 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC30.08■■■□□ 2.41
PRPF38AQ8NAV1 ST7-205ENST00000393446 2114 ntTSL 5 BASIC30.08■■■□□ 2.41
PRPF38AQ8NAV1 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC30.07■■■□□ 2.41
PRPF38AQ8NAV1 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC30.07■■■□□ 2.4
PRPF38AQ8NAV1 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC30.06■■■□□ 2.4
PRPF38AQ8NAV1 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC30.06■■■□□ 2.4
PRPF38AQ8NAV1 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC30.06■■■□□ 2.4
PRPF38AQ8NAV1 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC30.06■■■□□ 2.4
PRPF38AQ8NAV1 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC30.04■■■□□ 2.4
PRPF38AQ8NAV1 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC30.03■■■□□ 2.4
PRPF38AQ8NAV1 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC30.03■■■□□ 2.4
PRPF38AQ8NAV1 CHST11-202ENST00000546689 756 ntTSL 2 BASIC30.03■■■□□ 2.4
PRPF38AQ8NAV1 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC30.03■■■□□ 2.4
PRPF38AQ8NAV1 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC30.02■■■□□ 2.4
PRPF38AQ8NAV1 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC30.02■■■□□ 2.4
PRPF38AQ8NAV1 NRG3-203ENST00000404547 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC30.02■■■□□ 2.4
PRPF38AQ8NAV1 ST7-202ENST00000323984 2142 ntTSL 5 BASIC30.02■■■□□ 2.4
PRPF38AQ8NAV1 ST7-207ENST00000393449 2127 ntTSL 5 BASIC30.02■■■□□ 2.4
PRPF38AQ8NAV1 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC30.02■■■□□ 2.4
PRPF38AQ8NAV1 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC30.01■■■□□ 2.4
PRPF38AQ8NAV1 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC30■■■□□ 2.39
PRPF38AQ8NAV1 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC29.99■■■□□ 2.39
PRPF38AQ8NAV1 HSD17B1P1-201ENST00000590052 955 ntBASIC29.99■■■□□ 2.39
PRPF38AQ8NAV1 AC135983.2-203ENST00000454486 1613 ntBASIC29.98■■■□□ 2.39
PRPF38AQ8NAV1 ABHD17AP3-201ENST00000503096 1137 ntBASIC29.96■■■□□ 2.39
PRPF38AQ8NAV1 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC29.96■■■□□ 2.39
PRPF38AQ8NAV1 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC29.95■■■□□ 2.39
PRPF38AQ8NAV1 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC29.94■■■□□ 2.38
PRPF38AQ8NAV1 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC29.94■■■□□ 2.38
PRPF38AQ8NAV1 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC29.94■■■□□ 2.38
PRPF38AQ8NAV1 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC29.94■■■□□ 2.38
PRPF38AQ8NAV1 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC29.93■■■□□ 2.38
PRPF38AQ8NAV1 WHAMMP2-203ENST00000563942 1603 ntBASIC29.93■■■□□ 2.38
PRPF38AQ8NAV1 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC29.93■■■□□ 2.38
PRPF38AQ8NAV1 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC29.92■■■□□ 2.38
PRPF38AQ8NAV1 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC29.91■■■□□ 2.38
PRPF38AQ8NAV1 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC29.91■■■□□ 2.38
PRPF38AQ8NAV1 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC29.91■■■□□ 2.38
PRPF38AQ8NAV1 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC29.91■■■□□ 2.38
PRPF38AQ8NAV1 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC29.91■■■□□ 2.38
PRPF38AQ8NAV1 TFEB-204ENST00000373033 2331 ntAPPRIS P1 TSL 1 (best) BASIC29.9■■■□□ 2.38
PRPF38AQ8NAV1 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC29.9■■■□□ 2.38
PRPF38AQ8NAV1 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC29.9■■■□□ 2.38
PRPF38AQ8NAV1 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC29.9■■■□□ 2.38
PRPF38AQ8NAV1 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC29.9■■■□□ 2.38
PRPF38AQ8NAV1 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC29.9■■■□□ 2.38
PRPF38AQ8NAV1 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC29.9■■■□□ 2.38
PRPF38AQ8NAV1 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC29.9■■■□□ 2.38
PRPF38AQ8NAV1 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC29.9■■■□□ 2.38
PRPF38AQ8NAV1 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC29.9■■■□□ 2.38
PRPF38AQ8NAV1 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC29.9■■■□□ 2.38
PRPF38AQ8NAV1 SLC15A4-201ENST00000266771 2779 ntAPPRIS P1 TSL 1 (best) BASIC29.9■■■□□ 2.38
PRPF38AQ8NAV1 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC29.89■■■□□ 2.38
PRPF38AQ8NAV1 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC29.89■■■□□ 2.38
PRPF38AQ8NAV1 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC29.89■■■□□ 2.38
PRPF38AQ8NAV1 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC29.89■■■□□ 2.38
PRPF38AQ8NAV1 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC29.89■■■□□ 2.38
PRPF38AQ8NAV1 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC29.88■■■□□ 2.37
PRPF38AQ8NAV1 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC29.88■■■□□ 2.37
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms