Protein–RNA interactions for Protein: Q8N2R8

FAM43A, Protein FAM43A, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM43AQ8N2R8 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC31.39■■■□□ 2.62
FAM43AQ8N2R8 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC31.39■■■□□ 2.62
FAM43AQ8N2R8 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC31.39■■■□□ 2.61
FAM43AQ8N2R8 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC31.39■■■□□ 2.61
FAM43AQ8N2R8 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC31.38■■■□□ 2.61
FAM43AQ8N2R8 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC31.37■■■□□ 2.61
FAM43AQ8N2R8 AGPS-202ENST00000409888 815 ntTSL 4 BASIC31.37■■■□□ 2.61
FAM43AQ8N2R8 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC31.36■■■□□ 2.61
FAM43AQ8N2R8 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC31.36■■■□□ 2.61
FAM43AQ8N2R8 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC31.35■■■□□ 2.61
FAM43AQ8N2R8 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC31.35■■■□□ 2.61
FAM43AQ8N2R8 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC31.35■■■□□ 2.61
FAM43AQ8N2R8 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC31.35■■■□□ 2.61
FAM43AQ8N2R8 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC31.34■■■□□ 2.61
FAM43AQ8N2R8 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC31.34■■■□□ 2.61
FAM43AQ8N2R8 SNTG2-201ENST00000308624 1888 ntAPPRIS P1 TSL 1 (best) BASIC31.34■■■□□ 2.61
FAM43AQ8N2R8 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC31.34■■■□□ 2.61
FAM43AQ8N2R8 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC31.34■■■□□ 2.61
FAM43AQ8N2R8 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC31.33■■■□□ 2.61
FAM43AQ8N2R8 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC31.33■■■□□ 2.61
FAM43AQ8N2R8 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC31.33■■■□□ 2.61
FAM43AQ8N2R8 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC31.33■■■□□ 2.61
FAM43AQ8N2R8 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC31.33■■■□□ 2.61
FAM43AQ8N2R8 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC31.3■■■□□ 2.6
FAM43AQ8N2R8 TWIST1-201ENST00000242261 1666 ntAPPRIS P1 TSL 1 (best) BASIC31.3■■■□□ 2.6
FAM43AQ8N2R8 ABHD17AP3-201ENST00000503096 1137 ntBASIC31.3■■■□□ 2.6
FAM43AQ8N2R8 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC31.3■■■□□ 2.6
FAM43AQ8N2R8 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC31.29■■■□□ 2.6
FAM43AQ8N2R8 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
FAM43AQ8N2R8 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC31.29■■■□□ 2.6
FAM43AQ8N2R8 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC31.29■■■□□ 2.6
FAM43AQ8N2R8 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC31.29■■■□□ 2.6
FAM43AQ8N2R8 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC31.29■■■□□ 2.6
FAM43AQ8N2R8 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC31.28■■■□□ 2.6
FAM43AQ8N2R8 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC31.28■■■□□ 2.6
FAM43AQ8N2R8 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC31.28■■■□□ 2.6
FAM43AQ8N2R8 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC31.28■■■□□ 2.6
FAM43AQ8N2R8 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC31.28■■■□□ 2.6
FAM43AQ8N2R8 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC31.27■■■□□ 2.6
FAM43AQ8N2R8 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC31.27■■■□□ 2.6
FAM43AQ8N2R8 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
FAM43AQ8N2R8 RDX-206ENST00000528900 1814 ntTSL 1 (best) BASIC31.26■■■□□ 2.6
FAM43AQ8N2R8 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC31.25■■■□□ 2.59
FAM43AQ8N2R8 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC31.25■■■□□ 2.59
FAM43AQ8N2R8 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC31.25■■■□□ 2.59
FAM43AQ8N2R8 BRF1-221ENST00000619151 1530 ntTSL 5 BASIC31.24■■■□□ 2.59
FAM43AQ8N2R8 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC31.24■■■□□ 2.59
FAM43AQ8N2R8 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC31.24■■■□□ 2.59
FAM43AQ8N2R8 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC31.24■■■□□ 2.59
FAM43AQ8N2R8 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC31.23■■■□□ 2.59
FAM43AQ8N2R8 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC31.23■■■□□ 2.59
FAM43AQ8N2R8 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC31.22■■■□□ 2.59
FAM43AQ8N2R8 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC31.22■■■□□ 2.59
FAM43AQ8N2R8 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC31.22■■■□□ 2.59
FAM43AQ8N2R8 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC31.21■■■□□ 2.59
FAM43AQ8N2R8 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
FAM43AQ8N2R8 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC31.21■■■□□ 2.59
FAM43AQ8N2R8 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
FAM43AQ8N2R8 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC31.19■■■□□ 2.58
FAM43AQ8N2R8 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC31.18■■■□□ 2.58
FAM43AQ8N2R8 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC31.18■■■□□ 2.58
FAM43AQ8N2R8 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
FAM43AQ8N2R8 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
FAM43AQ8N2R8 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC31.16■■■□□ 2.58
FAM43AQ8N2R8 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC31.16■■■□□ 2.58
FAM43AQ8N2R8 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC31.16■■■□□ 2.58
FAM43AQ8N2R8 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC31.16■■■□□ 2.58
FAM43AQ8N2R8 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC31.16■■■□□ 2.58
FAM43AQ8N2R8 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC31.16■■■□□ 2.58
FAM43AQ8N2R8 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC31.16■■■□□ 2.58
FAM43AQ8N2R8 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC31.15■■■□□ 2.58
FAM43AQ8N2R8 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC31.15■■■□□ 2.58
FAM43AQ8N2R8 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC31.15■■■□□ 2.58
FAM43AQ8N2R8 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC31.14■■■□□ 2.58
FAM43AQ8N2R8 RASGEF1C-207ENST00000615330 2268 ntTSL 5 BASIC31.14■■■□□ 2.58
FAM43AQ8N2R8 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC31.13■■■□□ 2.57
FAM43AQ8N2R8 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC31.13■■■□□ 2.57
FAM43AQ8N2R8 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC31.13■■■□□ 2.57
FAM43AQ8N2R8 METRNL-202ENST00000570778 967 ntTSL 5 BASIC31.13■■■□□ 2.57
FAM43AQ8N2R8 VPS37D-201ENST00000324941 1624 ntAPPRIS P1 TSL 1 (best) BASIC31.13■■■□□ 2.57
FAM43AQ8N2R8 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC31.12■■■□□ 2.57
FAM43AQ8N2R8 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC31.12■■■□□ 2.57
FAM43AQ8N2R8 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC31.12■■■□□ 2.57
FAM43AQ8N2R8 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC31.11■■■□□ 2.57
FAM43AQ8N2R8 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC31.11■■■□□ 2.57
FAM43AQ8N2R8 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC31.11■■■□□ 2.57
FAM43AQ8N2R8 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC31.11■■■□□ 2.57
FAM43AQ8N2R8 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC31.1■■■□□ 2.57
FAM43AQ8N2R8 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC31.08■■■□□ 2.57
FAM43AQ8N2R8 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC31.08■■■□□ 2.57
FAM43AQ8N2R8 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC31.07■■■□□ 2.56
FAM43AQ8N2R8 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC31.07■■■□□ 2.56
FAM43AQ8N2R8 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC31.06■■■□□ 2.56
FAM43AQ8N2R8 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC31.06■■■□□ 2.56
FAM43AQ8N2R8 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC31.06■■■□□ 2.56
FAM43AQ8N2R8 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC31.05■■■□□ 2.56
FAM43AQ8N2R8 DUX4L13-201ENST00000554103 1267 ntBASIC31.05■■■□□ 2.56
FAM43AQ8N2R8 DUX4L15-201ENST00000611059 1267 ntBASIC31.05■■■□□ 2.56
FAM43AQ8N2R8 DUX4L23-201ENST00000615195 1269 ntBASIC31.05■■■□□ 2.56
FAM43AQ8N2R8 DUX4L24-201ENST00000617576 1269 ntBASIC31.05■■■□□ 2.56
Retrieved 100 of 98,524 protein–RNA pairs in 14.9 ms