Protein–RNA interactions for Protein: Q8HWS3

RFX6, DNA-binding protein RFX6, humanhuman

Predictions only

Length 928 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX6Q8HWS3 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC26.9■■□□□ 1.9
RFX6Q8HWS3 AC127502.1-201ENST00000399971 1502 ntBASIC26.9■■□□□ 1.9
RFX6Q8HWS3 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC26.89■■□□□ 1.9
RFX6Q8HWS3 AC005559.1-201ENST00000589661 871 ntBASIC26.89■■□□□ 1.9
RFX6Q8HWS3 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
RFX6Q8HWS3 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
RFX6Q8HWS3 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
RFX6Q8HWS3 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC26.87■■□□□ 1.89
RFX6Q8HWS3 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
RFX6Q8HWS3 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
RFX6Q8HWS3 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
RFX6Q8HWS3 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC26.86■■□□□ 1.89
RFX6Q8HWS3 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
RFX6Q8HWS3 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
RFX6Q8HWS3 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC26.85■■□□□ 1.89
RFX6Q8HWS3 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC26.85■■□□□ 1.89
RFX6Q8HWS3 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC26.85■■□□□ 1.89
RFX6Q8HWS3 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC26.85■■□□□ 1.89
RFX6Q8HWS3 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC26.84■■□□□ 1.89
RFX6Q8HWS3 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC26.84■■□□□ 1.89
RFX6Q8HWS3 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC26.84■■□□□ 1.89
RFX6Q8HWS3 AC142086.6-201ENST00000621154 1765 ntBASIC26.84■■□□□ 1.89
RFX6Q8HWS3 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC26.83■■□□□ 1.89
RFX6Q8HWS3 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.89
RFX6Q8HWS3 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.89
RFX6Q8HWS3 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC26.83■■□□□ 1.89
RFX6Q8HWS3 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC26.83■■□□□ 1.88
RFX6Q8HWS3 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.88
RFX6Q8HWS3 DRD5P2-201ENST00000421395 2012 ntBASIC26.82■■□□□ 1.88
RFX6Q8HWS3 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC26.82■■□□□ 1.88
RFX6Q8HWS3 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
RFX6Q8HWS3 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC26.82■■□□□ 1.88
RFX6Q8HWS3 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC26.82■■□□□ 1.88
RFX6Q8HWS3 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC26.81■■□□□ 1.88
RFX6Q8HWS3 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC26.8■■□□□ 1.88
RFX6Q8HWS3 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC26.8■■□□□ 1.88
RFX6Q8HWS3 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC26.8■■□□□ 1.88
RFX6Q8HWS3 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC26.8■■□□□ 1.88
RFX6Q8HWS3 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC26.79■■□□□ 1.88
RFX6Q8HWS3 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
RFX6Q8HWS3 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
RFX6Q8HWS3 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC26.79■■□□□ 1.88
RFX6Q8HWS3 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC26.79■■□□□ 1.88
RFX6Q8HWS3 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
RFX6Q8HWS3 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC26.78■■□□□ 1.88
RFX6Q8HWS3 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC26.78■■□□□ 1.88
RFX6Q8HWS3 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC26.78■■□□□ 1.88
RFX6Q8HWS3 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC26.78■■□□□ 1.88
RFX6Q8HWS3 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC26.78■■□□□ 1.88
RFX6Q8HWS3 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC26.78■■□□□ 1.88
RFX6Q8HWS3 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC26.77■■□□□ 1.88
RFX6Q8HWS3 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC26.77■■□□□ 1.88
RFX6Q8HWS3 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC26.76■■□□□ 1.87
RFX6Q8HWS3 AP004833.2-201ENST00000532228 1454 ntBASIC26.76■■□□□ 1.87
RFX6Q8HWS3 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC26.76■■□□□ 1.87
RFX6Q8HWS3 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC26.76■■□□□ 1.87
RFX6Q8HWS3 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC26.76■■□□□ 1.87
RFX6Q8HWS3 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
RFX6Q8HWS3 DUX4L28-201ENST00000623687 678 ntBASIC26.75■■□□□ 1.87
RFX6Q8HWS3 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC26.74■■□□□ 1.87
RFX6Q8HWS3 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC26.74■■□□□ 1.87
RFX6Q8HWS3 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC26.73■■□□□ 1.87
RFX6Q8HWS3 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC26.73■■□□□ 1.87
RFX6Q8HWS3 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC26.73■■□□□ 1.87
RFX6Q8HWS3 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC26.72■■□□□ 1.87
RFX6Q8HWS3 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC26.72■■□□□ 1.87
RFX6Q8HWS3 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC26.72■■□□□ 1.87
RFX6Q8HWS3 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC26.72■■□□□ 1.87
RFX6Q8HWS3 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC26.72■■□□□ 1.87
RFX6Q8HWS3 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
RFX6Q8HWS3 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC26.72■■□□□ 1.87
RFX6Q8HWS3 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
RFX6Q8HWS3 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
RFX6Q8HWS3 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC26.71■■□□□ 1.87
RFX6Q8HWS3 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC26.71■■□□□ 1.87
RFX6Q8HWS3 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC26.7■■□□□ 1.87
RFX6Q8HWS3 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC26.7■■□□□ 1.86
RFX6Q8HWS3 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.86
RFX6Q8HWS3 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC26.7■■□□□ 1.86
RFX6Q8HWS3 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.86
RFX6Q8HWS3 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC26.7■■□□□ 1.86
RFX6Q8HWS3 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
RFX6Q8HWS3 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
RFX6Q8HWS3 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC26.69■■□□□ 1.86
RFX6Q8HWS3 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC26.69■■□□□ 1.86
RFX6Q8HWS3 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC26.69■■□□□ 1.86
RFX6Q8HWS3 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC26.69■■□□□ 1.86
RFX6Q8HWS3 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC26.69■■□□□ 1.86
RFX6Q8HWS3 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
RFX6Q8HWS3 MIR3665-201ENST00000578708 105 ntBASIC26.68■■□□□ 1.86
RFX6Q8HWS3 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC26.68■■□□□ 1.86
RFX6Q8HWS3 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC26.68■■□□□ 1.86
RFX6Q8HWS3 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
RFX6Q8HWS3 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC26.67■■□□□ 1.86
RFX6Q8HWS3 AC108673.1-201ENST00000510422 1159 ntBASIC26.67■■□□□ 1.86
RFX6Q8HWS3 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC26.66■■□□□ 1.86
RFX6Q8HWS3 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC26.66■■□□□ 1.86
RFX6Q8HWS3 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
RFX6Q8HWS3 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
RFX6Q8HWS3 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
Retrieved 100 of 98,524 protein–RNA pairs in 13.9 ms