Protein–RNA interactions for Protein: Q6P161

MRPL54, 39S ribosomal protein L54, mitochondrial, humanhuman

Known RBP Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL54Q6P161 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
MRPL54Q6P161 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
MRPL54Q6P161 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
MRPL54Q6P161 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
MRPL54Q6P161 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
MRPL54Q6P161 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
MRPL54Q6P161 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC19.51■□□□□ 0.71
MRPL54Q6P161 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
MRPL54Q6P161 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
MRPL54Q6P161 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC19.51■□□□□ 0.71
MRPL54Q6P161 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
MRPL54Q6P161 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC19.51■□□□□ 0.71
MRPL54Q6P161 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
MRPL54Q6P161 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
MRPL54Q6P161 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC19.49■□□□□ 0.71
MRPL54Q6P161 FAM89B-202ENST00000449319 1337 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
MRPL54Q6P161 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
MRPL54Q6P161 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
MRPL54Q6P161 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
MRPL54Q6P161 AL449106.1-201ENST00000608517 1980 ntBASIC19.48■□□□□ 0.71
MRPL54Q6P161 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
MRPL54Q6P161 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
MRPL54Q6P161 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC19.47■□□□□ 0.71
MRPL54Q6P161 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
MRPL54Q6P161 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC19.47■□□□□ 0.71
MRPL54Q6P161 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
MRPL54Q6P161 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
MRPL54Q6P161 FBXO2-201ENST00000354287 1560 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
MRPL54Q6P161 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
MRPL54Q6P161 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC19.46■□□□□ 0.71
MRPL54Q6P161 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC19.46■□□□□ 0.71
MRPL54Q6P161 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
MRPL54Q6P161 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC19.45■□□□□ 0.7
MRPL54Q6P161 FAM89B-203ENST00000530349 1263 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
MRPL54Q6P161 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
MRPL54Q6P161 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
MRPL54Q6P161 AGTRAP-204ENST00000376637 1067 ntTSL 2 BASIC19.44■□□□□ 0.7
MRPL54Q6P161 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
MRPL54Q6P161 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
MRPL54Q6P161 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
MRPL54Q6P161 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
MRPL54Q6P161 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
MRPL54Q6P161 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
MRPL54Q6P161 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
MRPL54Q6P161 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
MRPL54Q6P161 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
MRPL54Q6P161 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
MRPL54Q6P161 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC19.41■□□□□ 0.7
MRPL54Q6P161 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC19.41■□□□□ 0.7
MRPL54Q6P161 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC19.41■□□□□ 0.7
MRPL54Q6P161 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
MRPL54Q6P161 MSANTD3-203ENST00000395067 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
MRPL54Q6P161 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
MRPL54Q6P161 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
MRPL54Q6P161 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
MRPL54Q6P161 BX255925.1-201ENST00000566954 1854 ntBASIC19.4■□□□□ 0.7
MRPL54Q6P161 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
MRPL54Q6P161 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
MRPL54Q6P161 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
MRPL54Q6P161 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC19.39■□□□□ 0.69
MRPL54Q6P161 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
MRPL54Q6P161 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
MRPL54Q6P161 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
MRPL54Q6P161 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
MRPL54Q6P161 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
MRPL54Q6P161 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
MRPL54Q6P161 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
MRPL54Q6P161 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
MRPL54Q6P161 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC19.37■□□□□ 0.69
MRPL54Q6P161 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
MRPL54Q6P161 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC19.37■□□□□ 0.69
MRPL54Q6P161 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
MRPL54Q6P161 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
MRPL54Q6P161 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
MRPL54Q6P161 FAM89A-201ENST00000366654 1495 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
MRPL54Q6P161 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
MRPL54Q6P161 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC19.36■□□□□ 0.69
MRPL54Q6P161 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
MRPL54Q6P161 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
MRPL54Q6P161 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
MRPL54Q6P161 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
MRPL54Q6P161 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
MRPL54Q6P161 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC19.35■□□□□ 0.69
MRPL54Q6P161 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC19.35■□□□□ 0.69
MRPL54Q6P161 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC19.34■□□□□ 0.69
MRPL54Q6P161 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
MRPL54Q6P161 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
MRPL54Q6P161 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
MRPL54Q6P161 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC19.34■□□□□ 0.69
MRPL54Q6P161 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
MRPL54Q6P161 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC19.33■□□□□ 0.69
MRPL54Q6P161 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC19.33■□□□□ 0.69
MRPL54Q6P161 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC19.33■□□□□ 0.69
MRPL54Q6P161 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
MRPL54Q6P161 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
MRPL54Q6P161 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
MRPL54Q6P161 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
MRPL54Q6P161 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC19.32■□□□□ 0.68
MRPL54Q6P161 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
MRPL54Q6P161 PKM-203ENST00000389093 2279 ntTSL 5 BASIC19.32■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 79.9 ms