Protein–RNA interactions for Protein: Q5TC82

RC3H1, Roquin-1, humanhuman

Known RBP Predictions only

Length 1,133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1Q5TC82 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC33.63■■■□□ 2.97
RC3H1Q5TC82 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC33.63■■■□□ 2.97
RC3H1Q5TC82 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC33.63■■■□□ 2.97
RC3H1Q5TC82 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC33.61■■■□□ 2.97
RC3H1Q5TC82 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC33.6■■■□□ 2.97
RC3H1Q5TC82 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC33.6■■■□□ 2.97
RC3H1Q5TC82 TPT1-202ENST00000379055 948 ntTSL 2 BASIC33.59■■■□□ 2.97
RC3H1Q5TC82 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC33.59■■■□□ 2.97
RC3H1Q5TC82 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC33.58■■■□□ 2.97
RC3H1Q5TC82 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC33.58■■■□□ 2.97
RC3H1Q5TC82 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC33.57■■■□□ 2.96
RC3H1Q5TC82 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC33.57■■■□□ 2.96
RC3H1Q5TC82 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC33.57■■■□□ 2.96
RC3H1Q5TC82 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC33.56■■■□□ 2.96
RC3H1Q5TC82 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC33.56■■■□□ 2.96
RC3H1Q5TC82 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC33.55■■■□□ 2.96
RC3H1Q5TC82 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC33.54■■■□□ 2.96
RC3H1Q5TC82 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC33.54■■■□□ 2.96
RC3H1Q5TC82 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC33.53■■■□□ 2.96
RC3H1Q5TC82 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC33.52■■■□□ 2.96
RC3H1Q5TC82 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC33.52■■■□□ 2.96
RC3H1Q5TC82 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC33.52■■■□□ 2.96
RC3H1Q5TC82 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC33.51■■■□□ 2.96
RC3H1Q5TC82 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC33.51■■■□□ 2.95
RC3H1Q5TC82 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC33.5■■■□□ 2.95
RC3H1Q5TC82 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC33.5■■■□□ 2.95
RC3H1Q5TC82 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC33.49■■■□□ 2.95
RC3H1Q5TC82 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC33.49■■■□□ 2.95
RC3H1Q5TC82 RASSF7-202ENST00000397583 1928 ntAPPRIS P3 TSL 1 (best) BASIC33.49■■■□□ 2.95
RC3H1Q5TC82 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC33.48■■■□□ 2.95
RC3H1Q5TC82 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC33.48■■■□□ 2.95
RC3H1Q5TC82 CEP120-209ENST00000515110 606 ntTSL 3 BASIC33.46■■■□□ 2.95
RC3H1Q5TC82 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC33.46■■■□□ 2.95
RC3H1Q5TC82 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC33.45■■■□□ 2.95
RC3H1Q5TC82 AL161658.1-201ENST00000623641 1967 ntBASIC33.43■■■□□ 2.94
RC3H1Q5TC82 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC33.43■■■□□ 2.94
RC3H1Q5TC82 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC33.43■■■□□ 2.94
RC3H1Q5TC82 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC33.43■■■□□ 2.94
RC3H1Q5TC82 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC33.42■■■□□ 2.94
RC3H1Q5TC82 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC33.42■■■□□ 2.94
RC3H1Q5TC82 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC33.42■■■□□ 2.94
RC3H1Q5TC82 SSBP3-204ENST00000371320 2077 ntAPPRIS P3 TSL 1 (best) BASIC33.41■■■□□ 2.94
RC3H1Q5TC82 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC33.41■■■□□ 2.94
RC3H1Q5TC82 AC010864.1-201ENST00000609407 1511 ntBASIC33.4■■■□□ 2.94
RC3H1Q5TC82 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC33.4■■■□□ 2.94
RC3H1Q5TC82 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC33.4■■■□□ 2.94
RC3H1Q5TC82 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC33.39■■■□□ 2.94
RC3H1Q5TC82 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC33.39■■■□□ 2.94
RC3H1Q5TC82 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC33.39■■■□□ 2.94
RC3H1Q5TC82 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC33.38■■■□□ 2.93
RC3H1Q5TC82 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC33.38■■■□□ 2.93
RC3H1Q5TC82 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC33.38■■■□□ 2.93
RC3H1Q5TC82 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC33.38■■■□□ 2.93
RC3H1Q5TC82 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC33.38■■■□□ 2.93
RC3H1Q5TC82 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC33.38■■■□□ 2.93
RC3H1Q5TC82 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC33.38■■■□□ 2.93
RC3H1Q5TC82 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC33.37■■■□□ 2.93
RC3H1Q5TC82 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC33.37■■■□□ 2.93
RC3H1Q5TC82 AC022413.1-201ENST00000624602 984 ntBASIC33.37■■■□□ 2.93
RC3H1Q5TC82 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC33.37■■■□□ 2.93
RC3H1Q5TC82 C11orf63-202ENST00000307257 1964 ntTSL 2 BASIC33.37■■■□□ 2.93
RC3H1Q5TC82 MTCP1-202ENST00000369476 2274 ntAPPRIS P1 TSL 3 BASIC33.36■■■□□ 2.93
RC3H1Q5TC82 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC33.35■■■□□ 2.93
RC3H1Q5TC82 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC33.34■■■□□ 2.93
RC3H1Q5TC82 AC008813.1-201ENST00000536597 885 ntBASIC33.34■■■□□ 2.93
RC3H1Q5TC82 NTF6A-201ENST00000591175 560 ntBASIC33.34■■■□□ 2.93
RC3H1Q5TC82 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC33.34■■■□□ 2.93
RC3H1Q5TC82 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC33.34■■■□□ 2.93
RC3H1Q5TC82 OLFM2-201ENST00000264833 2019 ntAPPRIS P1 TSL 1 (best) BASIC33.33■■■□□ 2.93
RC3H1Q5TC82 HES4-202ENST00000428771 1040 ntTSL 2 BASIC33.32■■■□□ 2.92
RC3H1Q5TC82 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC33.32■■■□□ 2.92
RC3H1Q5TC82 FOXD1-202ENST00000615637 2272 ntAPPRIS P1 BASIC33.31■■■□□ 2.92
RC3H1Q5TC82 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC33.3■■■□□ 2.92
RC3H1Q5TC82 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC33.3■■■□□ 2.92
RC3H1Q5TC82 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC33.28■■■□□ 2.92
RC3H1Q5TC82 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC33.28■■■□□ 2.92
RC3H1Q5TC82 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC33.28■■■□□ 2.92
RC3H1Q5TC82 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC33.28■■■□□ 2.92
RC3H1Q5TC82 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC33.28■■■□□ 2.92
RC3H1Q5TC82 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC33.27■■■□□ 2.92
RC3H1Q5TC82 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC33.27■■■□□ 2.92
RC3H1Q5TC82 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC33.27■■■□□ 2.92
RC3H1Q5TC82 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC33.27■■■□□ 2.92
RC3H1Q5TC82 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC33.26■■■□□ 2.91
RC3H1Q5TC82 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC33.25■■■□□ 2.91
RC3H1Q5TC82 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC33.24■■■□□ 2.91
RC3H1Q5TC82 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC33.24■■■□□ 2.91
RC3H1Q5TC82 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC33.24■■■□□ 2.91
RC3H1Q5TC82 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC33.24■■■□□ 2.91
RC3H1Q5TC82 AC012354.3-201ENST00000623734 483 ntBASIC33.24■■■□□ 2.91
RC3H1Q5TC82 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC33.23■■■□□ 2.91
RC3H1Q5TC82 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC33.22■■■□□ 2.91
RC3H1Q5TC82 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC33.21■■■□□ 2.91
RC3H1Q5TC82 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC33.21■■■□□ 2.91
RC3H1Q5TC82 SIAH1-203ENST00000394725 2147 ntAPPRIS P3 TSL 1 (best) BASIC33.21■■■□□ 2.91
RC3H1Q5TC82 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC33.18■■■□□ 2.9
RC3H1Q5TC82 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC33.18■■■□□ 2.9
RC3H1Q5TC82 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC33.17■■■□□ 2.9
RC3H1Q5TC82 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC33.17■■■□□ 2.9
RC3H1Q5TC82 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC33.17■■■□□ 2.9
Retrieved 100 of 98,524 protein–RNA pairs in 17.5 ms