Protein–RNA interactions for Protein: P49427

CDC34, Ubiquitin-conjugating enzyme E2 R1, humanhuman

Predicted RBP Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC34P49427 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
CDC34P49427 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CDC34P49427 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CDC34P49427 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC20.35■□□□□ 0.85
CDC34P49427 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
CDC34P49427 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
CDC34P49427 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CDC34P49427 BX255925.1-201ENST00000566954 1854 ntBASIC20.35■□□□□ 0.85
CDC34P49427 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
CDC34P49427 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
CDC34P49427 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC20.34■□□□□ 0.85
CDC34P49427 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC20.34■□□□□ 0.85
CDC34P49427 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
CDC34P49427 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.85
CDC34P49427 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CDC34P49427 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC20.33■□□□□ 0.84
CDC34P49427 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
CDC34P49427 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CDC34P49427 AC005524.1-203ENST00000586528 451 ntTSL 3 BASIC20.32■□□□□ 0.84
CDC34P49427 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CDC34P49427 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC20.32■□□□□ 0.84
CDC34P49427 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CDC34P49427 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC20.31■□□□□ 0.84
CDC34P49427 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CDC34P49427 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CDC34P49427 PRELID2-202ENST00000394450 1102 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CDC34P49427 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CDC34P49427 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CDC34P49427 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CDC34P49427 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC20.3■□□□□ 0.84
CDC34P49427 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CDC34P49427 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CDC34P49427 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CDC34P49427 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
CDC34P49427 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CDC34P49427 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
CDC34P49427 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CDC34P49427 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC20.29■□□□□ 0.84
CDC34P49427 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CDC34P49427 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CDC34P49427 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC20.29■□□□□ 0.84
CDC34P49427 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
CDC34P49427 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CDC34P49427 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CDC34P49427 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CDC34P49427 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC20.28■□□□□ 0.84
CDC34P49427 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CDC34P49427 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC20.28■□□□□ 0.84
CDC34P49427 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CDC34P49427 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
CDC34P49427 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
CDC34P49427 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
CDC34P49427 HMGB1-205ENST00000399494 1282 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
CDC34P49427 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC20.26■□□□□ 0.83
CDC34P49427 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CDC34P49427 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
CDC34P49427 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC20.26■□□□□ 0.83
CDC34P49427 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CDC34P49427 DYNLL1-207ENST00000549989 719 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CDC34P49427 DYNLL1-208ENST00000550178 581 ntBASIC20.25■□□□□ 0.83
CDC34P49427 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
CDC34P49427 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
CDC34P49427 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CDC34P49427 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CDC34P49427 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CDC34P49427 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
CDC34P49427 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CDC34P49427 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC20.24■□□□□ 0.83
CDC34P49427 SHF-208ENST00000560734 1731 ntTSL 3 BASIC20.23■□□□□ 0.83
CDC34P49427 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC20.23■□□□□ 0.83
CDC34P49427 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CDC34P49427 PROC-203ENST00000409048 1586 ntTSL 5 BASIC20.22■□□□□ 0.83
CDC34P49427 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CDC34P49427 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
CDC34P49427 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
CDC34P49427 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
CDC34P49427 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
CDC34P49427 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CDC34P49427 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CDC34P49427 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
CDC34P49427 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC20.2■□□□□ 0.82
CDC34P49427 SAP30-201ENST00000296504 1108 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CDC34P49427 AC010864.1-201ENST00000609407 1511 ntBASIC20.2■□□□□ 0.82
CDC34P49427 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC20.2■□□□□ 0.82
CDC34P49427 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
CDC34P49427 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC20.2■□□□□ 0.82
CDC34P49427 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC20.19■□□□□ 0.82
CDC34P49427 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CDC34P49427 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CDC34P49427 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CDC34P49427 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC20.18■□□□□ 0.82
CDC34P49427 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC20.18■□□□□ 0.82
CDC34P49427 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
CDC34P49427 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CDC34P49427 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CDC34P49427 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
CDC34P49427 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CDC34P49427 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC20.16■□□□□ 0.82
CDC34P49427 NKX1-1-201ENST00000422806 1236 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
CDC34P49427 ZNRF2P1-201ENST00000441407 443 ntBASIC20.16■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 69 ms