Protein–RNA interactions for Protein: P27449

ATP6V0C, V-type proton ATPase 16 kDa proteolipid subunit, humanhuman

Predictions only

Length 155 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V0CP27449 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
ATP6V0CP27449 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
ATP6V0CP27449 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
ATP6V0CP27449 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
ATP6V0CP27449 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
ATP6V0CP27449 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
ATP6V0CP27449 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
ATP6V0CP27449 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
ATP6V0CP27449 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
ATP6V0CP27449 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
ATP6V0CP27449 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
ATP6V0CP27449 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC20.73■□□□□ 0.91
ATP6V0CP27449 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
ATP6V0CP27449 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
ATP6V0CP27449 AC008738.5-201ENST00000587312 482 ntTSL 3 BASIC20.72■□□□□ 0.91
ATP6V0CP27449 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC20.72■□□□□ 0.91
ATP6V0CP27449 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC20.72■□□□□ 0.91
ATP6V0CP27449 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC20.71■□□□□ 0.91
ATP6V0CP27449 AL449106.1-201ENST00000608517 1980 ntBASIC20.71■□□□□ 0.91
ATP6V0CP27449 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
ATP6V0CP27449 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
ATP6V0CP27449 SYNGR1-202ENST00000318801 1361 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
ATP6V0CP27449 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
ATP6V0CP27449 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC20.69■□□□□ 0.9
ATP6V0CP27449 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
ATP6V0CP27449 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
ATP6V0CP27449 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
ATP6V0CP27449 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
ATP6V0CP27449 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
ATP6V0CP27449 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC20.68■□□□□ 0.9
ATP6V0CP27449 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
ATP6V0CP27449 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
ATP6V0CP27449 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
ATP6V0CP27449 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC20.67■□□□□ 0.9
ATP6V0CP27449 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
ATP6V0CP27449 SHF-208ENST00000560734 1731 ntTSL 3 BASIC20.67■□□□□ 0.9
ATP6V0CP27449 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC20.67■□□□□ 0.9
ATP6V0CP27449 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
ATP6V0CP27449 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
ATP6V0CP27449 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
ATP6V0CP27449 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
ATP6V0CP27449 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
ATP6V0CP27449 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
ATP6V0CP27449 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
ATP6V0CP27449 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
ATP6V0CP27449 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC20.65■□□□□ 0.9
ATP6V0CP27449 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.9
ATP6V0CP27449 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
ATP6V0CP27449 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
ATP6V0CP27449 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
ATP6V0CP27449 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC20.64■□□□□ 0.89
ATP6V0CP27449 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
ATP6V0CP27449 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
ATP6V0CP27449 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
ATP6V0CP27449 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC20.63■□□□□ 0.89
ATP6V0CP27449 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
ATP6V0CP27449 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
ATP6V0CP27449 PKM-204ENST00000449901 2526 ntTSL 2 BASIC20.63■□□□□ 0.89
ATP6V0CP27449 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
ATP6V0CP27449 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
ATP6V0CP27449 SH3GL1-202ENST00000417295 1404 ntTSL 2 BASIC20.62■□□□□ 0.89
ATP6V0CP27449 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC20.62■□□□□ 0.89
ATP6V0CP27449 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
ATP6V0CP27449 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
ATP6V0CP27449 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC20.62■□□□□ 0.89
ATP6V0CP27449 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC20.61■□□□□ 0.89
ATP6V0CP27449 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
ATP6V0CP27449 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC20.6■□□□□ 0.89
ATP6V0CP27449 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
ATP6V0CP27449 CYBA-201ENST00000261623 797 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
ATP6V0CP27449 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC20.6■□□□□ 0.89
ATP6V0CP27449 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
ATP6V0CP27449 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
ATP6V0CP27449 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
ATP6V0CP27449 PROC-203ENST00000409048 1586 ntTSL 5 BASIC20.59■□□□□ 0.89
ATP6V0CP27449 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
ATP6V0CP27449 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC20.58■□□□□ 0.89
ATP6V0CP27449 PKM-203ENST00000389093 2279 ntTSL 5 BASIC20.58■□□□□ 0.88
ATP6V0CP27449 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
ATP6V0CP27449 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC20.57■□□□□ 0.88
ATP6V0CP27449 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC20.57■□□□□ 0.88
ATP6V0CP27449 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
ATP6V0CP27449 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
ATP6V0CP27449 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC20.57■□□□□ 0.88
ATP6V0CP27449 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC20.56■□□□□ 0.88
ATP6V0CP27449 LINC01578-201ENST00000553829 732 ntTSL 2 BASIC20.56■□□□□ 0.88
ATP6V0CP27449 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC20.56■□□□□ 0.88
ATP6V0CP27449 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
ATP6V0CP27449 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
ATP6V0CP27449 FGF2-203ENST00000614010 867 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
ATP6V0CP27449 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
ATP6V0CP27449 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
ATP6V0CP27449 NRGN-201ENST00000284292 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
ATP6V0CP27449 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC20.54■□□□□ 0.88
ATP6V0CP27449 AC079848.1-201ENST00000511301 327 ntTSL 3 BASIC20.54■□□□□ 0.88
ATP6V0CP27449 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
ATP6V0CP27449 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC20.53■□□□□ 0.88
ATP6V0CP27449 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
ATP6V0CP27449 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
ATP6V0CP27449 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC20.52■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms