Protein–RNA interactions for Protein: P21741

MDK, Midkine, humanhuman

Predicted RBP Predictions only

Length 143 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MDKP21741 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
MDKP21741 AC021231.2-201ENST00000594613 730 ntBASIC21.32■■□□□ 1
MDKP21741 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
MDKP21741 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC21.32■■□□□ 1
MDKP21741 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
MDKP21741 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC21.32■■□□□ 1
MDKP21741 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
MDKP21741 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
MDKP21741 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
MDKP21741 CIB2-204ENST00000557846 934 ntTSL 3 BASIC21.31■■□□□ 1
MDKP21741 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC21.31■■□□□ 1
MDKP21741 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC21.31■■□□□ 1
MDKP21741 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC21.31■■□□□ 1
MDKP21741 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
MDKP21741 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
MDKP21741 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
MDKP21741 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
MDKP21741 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC21.29■■□□□ 1
MDKP21741 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
MDKP21741 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
MDKP21741 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
MDKP21741 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
MDKP21741 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
MDKP21741 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC21.28■■□□□ 1
MDKP21741 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
MDKP21741 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC21.27■□□□□ 0.99
MDKP21741 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC21.26■□□□□ 0.99
MDKP21741 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
MDKP21741 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
MDKP21741 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
MDKP21741 MIR4449-201ENST00000578365 66 ntBASIC21.25■□□□□ 0.99
MDKP21741 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC21.25■□□□□ 0.99
MDKP21741 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC21.25■□□□□ 0.99
MDKP21741 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC21.24■□□□□ 0.99
MDKP21741 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
MDKP21741 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
MDKP21741 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
MDKP21741 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC21.23■□□□□ 0.99
MDKP21741 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
MDKP21741 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC21.22■□□□□ 0.99
MDKP21741 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
MDKP21741 MIR639-201ENST00000384974 98 ntBASIC21.22■□□□□ 0.99
MDKP21741 MACF1-219ENST00000484793 834 ntTSL 2 BASIC21.22■□□□□ 0.99
MDKP21741 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
MDKP21741 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
MDKP21741 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
MDKP21741 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC21.21■□□□□ 0.99
MDKP21741 AC108673.1-201ENST00000510422 1159 ntBASIC21.21■□□□□ 0.99
MDKP21741 MIR6090-201ENST00000622481 60 ntBASIC21.21■□□□□ 0.99
MDKP21741 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
MDKP21741 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC21.21■□□□□ 0.99
MDKP21741 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
MDKP21741 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.99
MDKP21741 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
MDKP21741 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
MDKP21741 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC21.2■□□□□ 0.98
MDKP21741 RNF166-209ENST00000567844 633 ntTSL 5 BASIC21.2■□□□□ 0.98
MDKP21741 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC21.2■□□□□ 0.98
MDKP21741 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
MDKP21741 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC21.2■□□□□ 0.98
MDKP21741 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC21.19■□□□□ 0.98
MDKP21741 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
MDKP21741 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
MDKP21741 AC135731.1-201ENST00000569415 2548 ntBASIC21.18■□□□□ 0.98
MDKP21741 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
MDKP21741 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC21.18■□□□□ 0.98
MDKP21741 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
MDKP21741 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
MDKP21741 AC016575.1-201ENST00000607026 382 ntBASIC21.17■□□□□ 0.98
MDKP21741 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
MDKP21741 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
MDKP21741 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
MDKP21741 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
MDKP21741 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
MDKP21741 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
MDKP21741 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
MDKP21741 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
MDKP21741 MIR3648-2-201ENST00000581792 180 ntBASIC21.15■□□□□ 0.98
MDKP21741 MIR3648-1-201ENST00000615959 180 ntBASIC21.15■□□□□ 0.98
MDKP21741 GDI1-215ENST00000630693 786 ntTSL 4 BASIC21.15■□□□□ 0.98
MDKP21741 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
MDKP21741 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
MDKP21741 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
MDKP21741 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
MDKP21741 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
MDKP21741 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC21.14■□□□□ 0.97
MDKP21741 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC21.14■□□□□ 0.97
MDKP21741 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC21.14■□□□□ 0.97
MDKP21741 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
MDKP21741 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
MDKP21741 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
MDKP21741 AC142086.6-201ENST00000621154 1765 ntBASIC21.13■□□□□ 0.97
MDKP21741 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC21.12■□□□□ 0.97
MDKP21741 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
MDKP21741 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
MDKP21741 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC21.12■□□□□ 0.97
MDKP21741 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC21.12■□□□□ 0.97
MDKP21741 CALM3-209ENST00000597743 577 ntTSL 4 BASIC21.12■□□□□ 0.97
MDKP21741 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
MDKP21741 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC21.12■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 54.7 ms