Protein–RNA interactions for Protein: P01135

TGFA, Protransforming growth factor alpha, humanhuman

Predictions only

Length 160 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TGFAP01135 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC21.55■■□□□ 1.04
TGFAP01135 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC21.55■■□□□ 1.04
TGFAP01135 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC21.54■■□□□ 1.04
TGFAP01135 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
TGFAP01135 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
TGFAP01135 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC21.54■■□□□ 1.04
TGFAP01135 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC21.53■■□□□ 1.04
TGFAP01135 SULT4A1-201ENST00000330884 2468 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
TGFAP01135 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
TGFAP01135 CISD3-204ENST00000613478 2074 ntAPPRIS P1 TSL 2 BASIC21.52■■□□□ 1.04
TGFAP01135 TPT1-202ENST00000379055 948 ntTSL 2 BASIC21.51■■□□□ 1.03
TGFAP01135 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC21.51■■□□□ 1.03
TGFAP01135 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC21.51■■□□□ 1.03
TGFAP01135 SRP68-213ENST00000629930 165 ntTSL 5 BASIC21.51■■□□□ 1.03
TGFAP01135 LINC00273-201ENST00000539813 1452 ntBASIC21.51■■□□□ 1.03
TGFAP01135 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC21.51■■□□□ 1.03
TGFAP01135 CSPG5-205ENST00000610462 2073 ntTSL 5 BASIC21.5■■□□□ 1.03
TGFAP01135 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC21.49■■□□□ 1.03
TGFAP01135 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
TGFAP01135 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC21.49■■□□□ 1.03
TGFAP01135 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC21.49■■□□□ 1.03
TGFAP01135 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC21.48■■□□□ 1.03
TGFAP01135 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC21.48■■□□□ 1.03
TGFAP01135 AC010864.1-201ENST00000609407 1511 ntBASIC21.48■■□□□ 1.03
TGFAP01135 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
TGFAP01135 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC21.47■■□□□ 1.03
TGFAP01135 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC21.47■■□□□ 1.03
TGFAP01135 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
TGFAP01135 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
TGFAP01135 RARRES2P2-201ENST00000394842 485 ntBASIC21.46■■□□□ 1.03
TGFAP01135 GPX1-201ENST00000419349 1106 ntBASIC21.46■■□□□ 1.03
TGFAP01135 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC21.46■■□□□ 1.03
TGFAP01135 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
TGFAP01135 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC21.45■■□□□ 1.02
TGFAP01135 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
TGFAP01135 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC21.45■■□□□ 1.02
TGFAP01135 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC21.45■■□□□ 1.02
TGFAP01135 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
TGFAP01135 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
TGFAP01135 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
TGFAP01135 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
TGFAP01135 CEP120-209ENST00000515110 606 ntTSL 3 BASIC21.43■■□□□ 1.02
TGFAP01135 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
TGFAP01135 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
TGFAP01135 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC21.42■■□□□ 1.02
TGFAP01135 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
TGFAP01135 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC21.42■■□□□ 1.02
TGFAP01135 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
TGFAP01135 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
TGFAP01135 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
TGFAP01135 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
TGFAP01135 ABHD17AP5-201ENST00000580133 923 ntBASIC21.4■■□□□ 1.02
TGFAP01135 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC21.39■■□□□ 1.01
TGFAP01135 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC21.39■■□□□ 1.01
TGFAP01135 ADRA1D-201ENST00000379453 2728 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
TGFAP01135 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
TGFAP01135 RNF126P1-201ENST00000567452 1320 ntBASIC21.38■■□□□ 1.01
TGFAP01135 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC21.38■■□□□ 1.01
TGFAP01135 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC21.38■■□□□ 1.01
TGFAP01135 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC21.38■■□□□ 1.01
TGFAP01135 GRASP-201ENST00000293662 1933 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
TGFAP01135 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC21.37■■□□□ 1.01
TGFAP01135 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC21.37■■□□□ 1.01
TGFAP01135 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
TGFAP01135 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
TGFAP01135 PDXP-201ENST00000215904 2010 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
TGFAP01135 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
TGFAP01135 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
TGFAP01135 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC21.36■■□□□ 1.01
TGFAP01135 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
TGFAP01135 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
TGFAP01135 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
TGFAP01135 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
TGFAP01135 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC21.35■■□□□ 1.01
TGFAP01135 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC21.35■■□□□ 1.01
TGFAP01135 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC21.35■■□□□ 1.01
TGFAP01135 AC022413.1-201ENST00000624602 984 ntBASIC21.34■■□□□ 1.01
TGFAP01135 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
TGFAP01135 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC21.34■■□□□ 1.01
TGFAP01135 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
TGFAP01135 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
TGFAP01135 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
TGFAP01135 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
TGFAP01135 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC21.32■■□□□ 1
TGFAP01135 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
TGFAP01135 AC008813.1-201ENST00000536597 885 ntBASIC21.31■■□□□ 1
TGFAP01135 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC21.31■■□□□ 1
TGFAP01135 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC21.31■■□□□ 1
TGFAP01135 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
TGFAP01135 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
TGFAP01135 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC21.3■■□□□ 1
TGFAP01135 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC21.3■■□□□ 1
TGFAP01135 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC21.3■■□□□ 1
TGFAP01135 IFNGR2-201ENST00000290219 2221 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
TGFAP01135 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC21.29■■□□□ 1
TGFAP01135 GPI-201ENST00000356487 2210 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
TGFAP01135 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
TGFAP01135 AC127502.1-201ENST00000399971 1502 ntBASIC21.29■■□□□ 1
TGFAP01135 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
TGFAP01135 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 12.9 ms