Protein–RNA interactions for Protein: O00151

PDLIM1, PDZ and LIM domain protein 1, humanhuman

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1O00151 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC24.5■■□□□ 1.51
PDLIM1O00151 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
PDLIM1O00151 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC24.49■■□□□ 1.51
PDLIM1O00151 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC24.49■■□□□ 1.51
PDLIM1O00151 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
PDLIM1O00151 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
PDLIM1O00151 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC24.48■■□□□ 1.51
PDLIM1O00151 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
PDLIM1O00151 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC24.48■■□□□ 1.51
PDLIM1O00151 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
PDLIM1O00151 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC24.48■■□□□ 1.51
PDLIM1O00151 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC24.47■■□□□ 1.51
PDLIM1O00151 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC24.47■■□□□ 1.51
PDLIM1O00151 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC24.47■■□□□ 1.51
PDLIM1O00151 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
PDLIM1O00151 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
PDLIM1O00151 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
PDLIM1O00151 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC24.46■■□□□ 1.51
PDLIM1O00151 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC24.46■■□□□ 1.51
PDLIM1O00151 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
PDLIM1O00151 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
PDLIM1O00151 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC24.44■■□□□ 1.5
PDLIM1O00151 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC24.43■■□□□ 1.5
PDLIM1O00151 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
PDLIM1O00151 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC24.43■■□□□ 1.5
PDLIM1O00151 LTK-203ENST00000453182 2412 ntTSL 2 BASIC24.42■■□□□ 1.5
PDLIM1O00151 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC24.42■■□□□ 1.5
PDLIM1O00151 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
PDLIM1O00151 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
PDLIM1O00151 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
PDLIM1O00151 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC24.41■■□□□ 1.5
PDLIM1O00151 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC24.41■■□□□ 1.5
PDLIM1O00151 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
PDLIM1O00151 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
PDLIM1O00151 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC24.4■■□□□ 1.5
PDLIM1O00151 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC24.39■■□□□ 1.5
PDLIM1O00151 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
PDLIM1O00151 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
PDLIM1O00151 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC24.38■■□□□ 1.49
PDLIM1O00151 SETD8P1-201ENST00000623146 1180 ntBASIC24.38■■□□□ 1.49
PDLIM1O00151 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
PDLIM1O00151 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
PDLIM1O00151 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC24.38■■□□□ 1.49
PDLIM1O00151 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
PDLIM1O00151 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC24.37■■□□□ 1.49
PDLIM1O00151 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC24.37■■□□□ 1.49
PDLIM1O00151 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC24.37■■□□□ 1.49
PDLIM1O00151 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
PDLIM1O00151 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC24.37■■□□□ 1.49
PDLIM1O00151 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
PDLIM1O00151 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
PDLIM1O00151 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
PDLIM1O00151 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
PDLIM1O00151 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC24.35■■□□□ 1.49
PDLIM1O00151 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
PDLIM1O00151 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC24.35■■□□□ 1.49
PDLIM1O00151 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
PDLIM1O00151 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
PDLIM1O00151 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
PDLIM1O00151 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC24.34■■□□□ 1.49
PDLIM1O00151 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
PDLIM1O00151 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC24.34■■□□□ 1.49
PDLIM1O00151 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
PDLIM1O00151 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC24.34■■□□□ 1.49
PDLIM1O00151 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
PDLIM1O00151 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC24.33■■□□□ 1.48
PDLIM1O00151 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.48
PDLIM1O00151 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC24.33■■□□□ 1.48
PDLIM1O00151 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
PDLIM1O00151 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC24.32■■□□□ 1.48
PDLIM1O00151 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC24.32■■□□□ 1.48
PDLIM1O00151 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
PDLIM1O00151 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
PDLIM1O00151 AC136428.2-201ENST00000563187 214 ntBASIC24.29■■□□□ 1.48
PDLIM1O00151 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
PDLIM1O00151 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
PDLIM1O00151 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
PDLIM1O00151 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
PDLIM1O00151 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC24.28■■□□□ 1.48
PDLIM1O00151 AL133380.1-201ENST00000506013 324 ntBASIC24.28■■□□□ 1.48
PDLIM1O00151 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC24.28■■□□□ 1.48
PDLIM1O00151 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC24.27■■□□□ 1.48
PDLIM1O00151 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
PDLIM1O00151 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
PDLIM1O00151 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
PDLIM1O00151 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC24.26■■□□□ 1.47
PDLIM1O00151 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC24.26■■□□□ 1.47
PDLIM1O00151 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
PDLIM1O00151 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC24.26■■□□□ 1.47
PDLIM1O00151 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC24.26■■□□□ 1.47
PDLIM1O00151 AC097358.2-201ENST00000607541 1159 ntBASIC24.25■■□□□ 1.47
PDLIM1O00151 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
PDLIM1O00151 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
PDLIM1O00151 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC24.24■■□□□ 1.47
PDLIM1O00151 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
PDLIM1O00151 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
PDLIM1O00151 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC24.23■■□□□ 1.47
PDLIM1O00151 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
PDLIM1O00151 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
PDLIM1O00151 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC24.22■■□□□ 1.47
Retrieved 100 of 98,524 protein–RNA pairs in 11.8 ms