Protein–RNA interactions for Protein: A6NLU0

RFPL4A, Ret finger protein-like 4A, humanhuman

Predictions only

Length 287 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFPL4AA6NLU0 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
RFPL4AA6NLU0 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC22.21■■□□□ 1.15
RFPL4AA6NLU0 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
RFPL4AA6NLU0 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
RFPL4AA6NLU0 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
RFPL4AA6NLU0 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC22.2■■□□□ 1.14
RFPL4AA6NLU0 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
RFPL4AA6NLU0 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
RFPL4AA6NLU0 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
RFPL4AA6NLU0 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC22.18■■□□□ 1.14
RFPL4AA6NLU0 MIR762-201ENST00000390236 83 ntBASIC22.18■■□□□ 1.14
RFPL4AA6NLU0 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
RFPL4AA6NLU0 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC22.17■■□□□ 1.14
RFPL4AA6NLU0 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC22.17■■□□□ 1.14
RFPL4AA6NLU0 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
RFPL4AA6NLU0 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC22.17■■□□□ 1.14
RFPL4AA6NLU0 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
RFPL4AA6NLU0 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
RFPL4AA6NLU0 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC22.16■■□□□ 1.14
RFPL4AA6NLU0 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC22.16■■□□□ 1.14
RFPL4AA6NLU0 SHF-207ENST00000560540 2062 ntTSL 5 BASIC22.16■■□□□ 1.14
RFPL4AA6NLU0 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC22.16■■□□□ 1.14
RFPL4AA6NLU0 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC22.15■■□□□ 1.14
RFPL4AA6NLU0 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
RFPL4AA6NLU0 CHML-205ENST00000638160 705 ntTSL 3 BASIC22.15■■□□□ 1.14
RFPL4AA6NLU0 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
RFPL4AA6NLU0 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC22.15■■□□□ 1.14
RFPL4AA6NLU0 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
RFPL4AA6NLU0 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
RFPL4AA6NLU0 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
RFPL4AA6NLU0 AL121749.1-202ENST00000609313 2153 ntBASIC22.14■■□□□ 1.13
RFPL4AA6NLU0 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC22.14■■□□□ 1.13
RFPL4AA6NLU0 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC22.14■■□□□ 1.13
RFPL4AA6NLU0 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC22.14■■□□□ 1.13
RFPL4AA6NLU0 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
RFPL4AA6NLU0 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
RFPL4AA6NLU0 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC22.13■■□□□ 1.13
RFPL4AA6NLU0 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
RFPL4AA6NLU0 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC22.13■■□□□ 1.13
RFPL4AA6NLU0 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
RFPL4AA6NLU0 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
RFPL4AA6NLU0 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC22.13■■□□□ 1.13
RFPL4AA6NLU0 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
RFPL4AA6NLU0 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
RFPL4AA6NLU0 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
RFPL4AA6NLU0 HNRNPLP2-201ENST00000568980 1570 ntBASIC22.12■■□□□ 1.13
RFPL4AA6NLU0 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC22.12■■□□□ 1.13
RFPL4AA6NLU0 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
RFPL4AA6NLU0 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
RFPL4AA6NLU0 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
RFPL4AA6NLU0 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC22.11■■□□□ 1.13
RFPL4AA6NLU0 AC010864.1-201ENST00000609407 1511 ntBASIC22.11■■□□□ 1.13
RFPL4AA6NLU0 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC22.1■■□□□ 1.13
RFPL4AA6NLU0 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC22.1■■□□□ 1.13
RFPL4AA6NLU0 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC22.1■■□□□ 1.13
RFPL4AA6NLU0 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC22.1■■□□□ 1.13
RFPL4AA6NLU0 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
RFPL4AA6NLU0 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
RFPL4AA6NLU0 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC22.09■■□□□ 1.13
RFPL4AA6NLU0 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
RFPL4AA6NLU0 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC22.09■■□□□ 1.13
RFPL4AA6NLU0 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC22.09■■□□□ 1.13
RFPL4AA6NLU0 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC22.09■■□□□ 1.13
RFPL4AA6NLU0 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
RFPL4AA6NLU0 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
RFPL4AA6NLU0 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
RFPL4AA6NLU0 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC22.07■■□□□ 1.12
RFPL4AA6NLU0 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
RFPL4AA6NLU0 AC005559.1-201ENST00000589661 871 ntBASIC22.06■■□□□ 1.12
RFPL4AA6NLU0 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
RFPL4AA6NLU0 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC22.06■■□□□ 1.12
RFPL4AA6NLU0 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC22.05■■□□□ 1.12
RFPL4AA6NLU0 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
RFPL4AA6NLU0 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC22.04■■□□□ 1.12
RFPL4AA6NLU0 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
RFPL4AA6NLU0 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
RFPL4AA6NLU0 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
RFPL4AA6NLU0 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
RFPL4AA6NLU0 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC22.02■■□□□ 1.12
RFPL4AA6NLU0 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
RFPL4AA6NLU0 RPS2-209ENST00000529806 993 ntTSL 3 BASIC22.02■■□□□ 1.12
RFPL4AA6NLU0 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
RFPL4AA6NLU0 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC22.02■■□□□ 1.12
RFPL4AA6NLU0 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
RFPL4AA6NLU0 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC22■■□□□ 1.11
RFPL4AA6NLU0 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC22■■□□□ 1.11
RFPL4AA6NLU0 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC22■■□□□ 1.11
RFPL4AA6NLU0 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
RFPL4AA6NLU0 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC22■■□□□ 1.11
RFPL4AA6NLU0 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC22■■□□□ 1.11
RFPL4AA6NLU0 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC21.99■■□□□ 1.11
RFPL4AA6NLU0 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
RFPL4AA6NLU0 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC21.99■■□□□ 1.11
RFPL4AA6NLU0 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC21.98■■□□□ 1.11
RFPL4AA6NLU0 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC21.98■■□□□ 1.11
RFPL4AA6NLU0 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
RFPL4AA6NLU0 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC21.97■■□□□ 1.11
RFPL4AA6NLU0 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
RFPL4AA6NLU0 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
RFPL4AA6NLU0 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms