Protein–RNA interactions for Protein: A6NEE1

PLEKHD1, Pleckstrin homology domain-containing family D member 1, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PLEKHD1A6NEE1 LINC00273-201ENST00000539813 1452 ntBASIC41.03■■■■■ 4.16
PLEKHD1A6NEE1 RNF126P1-201ENST00000567452 1320 ntBASIC41.02■■■■■ 4.16
PLEKHD1A6NEE1 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC41.02■■■■■ 4.16
PLEKHD1A6NEE1 TPT1-202ENST00000379055 948 ntTSL 2 BASIC41.01■■■■■ 4.16
PLEKHD1A6NEE1 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC41■■■■■ 4.15
PLEKHD1A6NEE1 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC40.99■■■■■ 4.15
PLEKHD1A6NEE1 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC40.99■■■■■ 4.15
PLEKHD1A6NEE1 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC40.98■■■■■ 4.15
PLEKHD1A6NEE1 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC40.98■■■■■ 4.15
PLEKHD1A6NEE1 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC40.98■■■■■ 4.15
PLEKHD1A6NEE1 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC40.98■■■■■ 4.15
PLEKHD1A6NEE1 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC40.98■■■■■ 4.15
PLEKHD1A6NEE1 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC40.98■■■■■ 4.15
PLEKHD1A6NEE1 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC40.97■■■■■ 4.15
PLEKHD1A6NEE1 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC40.96■■■■■ 4.15
PLEKHD1A6NEE1 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC40.95■■■■■ 4.15
PLEKHD1A6NEE1 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC40.95■■■■■ 4.15
PLEKHD1A6NEE1 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC40.94■■■■■ 4.14
PLEKHD1A6NEE1 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC40.94■■■■■ 4.14
PLEKHD1A6NEE1 RASSF7-202ENST00000397583 1928 ntAPPRIS P3 TSL 1 (best) BASIC40.93■■■■■ 4.14
PLEKHD1A6NEE1 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC40.93■■■■■ 4.14
PLEKHD1A6NEE1 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC40.91■■■■■ 4.14
PLEKHD1A6NEE1 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC40.91■■■■■ 4.14
PLEKHD1A6NEE1 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC40.9■■■■■ 4.14
PLEKHD1A6NEE1 SSBP3-204ENST00000371320 2077 ntAPPRIS P3 TSL 1 (best) BASIC40.9■■■■■ 4.14
PLEKHD1A6NEE1 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC40.9■■■■■ 4.14
PLEKHD1A6NEE1 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC40.88■■■■■ 4.13
PLEKHD1A6NEE1 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC40.87■■■■■ 4.13
PLEKHD1A6NEE1 CEP120-209ENST00000515110 606 ntTSL 3 BASIC40.87■■■■■ 4.13
PLEKHD1A6NEE1 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC40.86■■■■■ 4.13
PLEKHD1A6NEE1 AL161658.1-201ENST00000623641 1967 ntBASIC40.86■■■■■ 4.13
PLEKHD1A6NEE1 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC40.85■■■■■ 4.13
PLEKHD1A6NEE1 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC40.85■■■■■ 4.13
PLEKHD1A6NEE1 FOXD1-202ENST00000615637 2272 ntAPPRIS P1 BASIC40.84■■■■■ 4.13
PLEKHD1A6NEE1 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC40.84■■■■■ 4.13
PLEKHD1A6NEE1 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC40.84■■■■■ 4.13
PLEKHD1A6NEE1 MTCP1-202ENST00000369476 2274 ntAPPRIS P1 TSL 3 BASIC40.83■■■■■ 4.13
PLEKHD1A6NEE1 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC40.83■■■■■ 4.13
PLEKHD1A6NEE1 C11orf63-202ENST00000307257 1964 ntTSL 2 BASIC40.81■■■■■ 4.12
PLEKHD1A6NEE1 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC40.81■■■■■ 4.12
PLEKHD1A6NEE1 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC40.8■■■■■ 4.12
PLEKHD1A6NEE1 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC40.8■■■■■ 4.12
PLEKHD1A6NEE1 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC40.79■■■■■ 4.12
PLEKHD1A6NEE1 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC40.79■■■■■ 4.12
PLEKHD1A6NEE1 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC40.77■■■■■ 4.12
PLEKHD1A6NEE1 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC40.77■■■■■ 4.12
PLEKHD1A6NEE1 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC40.76■■■■■ 4.12
PLEKHD1A6NEE1 AC010864.1-201ENST00000609407 1511 ntBASIC40.76■■■■■ 4.12
PLEKHD1A6NEE1 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC40.76■■■■■ 4.12
PLEKHD1A6NEE1 OLFM2-201ENST00000264833 2019 ntAPPRIS P1 TSL 1 (best) BASIC40.76■■■■■ 4.11
PLEKHD1A6NEE1 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC40.75■■■■■ 4.11
PLEKHD1A6NEE1 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC40.75■■■■■ 4.11
PLEKHD1A6NEE1 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC40.75■■■■■ 4.11
PLEKHD1A6NEE1 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC40.74■■■■■ 4.11
PLEKHD1A6NEE1 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC40.74■■■■■ 4.11
PLEKHD1A6NEE1 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC40.74■■■■■ 4.11
PLEKHD1A6NEE1 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC40.73■■■■■ 4.11
PLEKHD1A6NEE1 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC40.73■■■■■ 4.11
PLEKHD1A6NEE1 AC022413.1-201ENST00000624602 984 ntBASIC40.73■■■■■ 4.11
PLEKHD1A6NEE1 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC40.73■■■■■ 4.11
PLEKHD1A6NEE1 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC40.72■■■■■ 4.11
PLEKHD1A6NEE1 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC40.72■■■■■ 4.11
PLEKHD1A6NEE1 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC40.71■■■■■ 4.11
PLEKHD1A6NEE1 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC40.71■■■■■ 4.11
PLEKHD1A6NEE1 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC40.71■■■■■ 4.11
PLEKHD1A6NEE1 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC40.71■■■■■ 4.11
PLEKHD1A6NEE1 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC40.69■■■■■ 4.11
PLEKHD1A6NEE1 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC40.69■■■■■ 4.1
PLEKHD1A6NEE1 NTF6A-201ENST00000591175 560 ntBASIC40.68■■■■■ 4.1
PLEKHD1A6NEE1 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC40.67■■■■■ 4.1
PLEKHD1A6NEE1 SIAH1-203ENST00000394725 2147 ntAPPRIS P3 TSL 1 (best) BASIC40.66■■■■■ 4.1
PLEKHD1A6NEE1 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC40.65■■■■■ 4.1
PLEKHD1A6NEE1 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC40.65■■■■■ 4.1
PLEKHD1A6NEE1 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC40.65■■■■■ 4.1
PLEKHD1A6NEE1 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC40.65■■■■■ 4.1
PLEKHD1A6NEE1 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC40.65■■■■■ 4.1
PLEKHD1A6NEE1 AC008813.1-201ENST00000536597 885 ntBASIC40.64■■■■■ 4.1
PLEKHD1A6NEE1 HES4-202ENST00000428771 1040 ntTSL 2 BASIC40.62■■■■■ 4.09
PLEKHD1A6NEE1 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC40.62■■■■■ 4.09
PLEKHD1A6NEE1 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC40.62■■■■■ 4.09
PLEKHD1A6NEE1 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC40.6■■■■■ 4.09
PLEKHD1A6NEE1 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC40.6■■■■■ 4.09
PLEKHD1A6NEE1 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC40.6■■■■■ 4.09
PLEKHD1A6NEE1 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC40.59■■■■■ 4.09
PLEKHD1A6NEE1 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC40.59■■■■■ 4.09
PLEKHD1A6NEE1 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC40.58■■■■■ 4.09
PLEKHD1A6NEE1 AC012354.3-201ENST00000623734 483 ntBASIC40.58■■■■■ 4.09
PLEKHD1A6NEE1 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC40.57■■■■■ 4.09
PLEKHD1A6NEE1 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC40.56■■■■■ 4.08
PLEKHD1A6NEE1 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC40.56■■■■■ 4.08
PLEKHD1A6NEE1 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC40.56■■■■■ 4.08
PLEKHD1A6NEE1 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC40.55■■■■■ 4.08
PLEKHD1A6NEE1 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC40.54■■■■■ 4.08
PLEKHD1A6NEE1 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC40.54■■■■■ 4.08
PLEKHD1A6NEE1 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC40.53■■■■■ 4.08
PLEKHD1A6NEE1 CISD3-204ENST00000613478 2074 ntAPPRIS P1 TSL 2 BASIC40.53■■■■■ 4.08
PLEKHD1A6NEE1 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC40.52■■■■■ 4.08
PLEKHD1A6NEE1 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC40.52■■■■■ 4.08
PLEKHD1A6NEE1 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC40.5■■■■■ 4.07
PLEKHD1A6NEE1 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC40.47■■■■■ 4.07
Retrieved 100 of 98,524 protein–RNA pairs in 81.8 ms