Protein–RNA interactions for Protein: A0A0B4J2F2

LOC102724428, SNF1-like kinase, isoform CRA_a, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LOC102724428A0A0B4J2F2 SSBP3-204ENST00000371320 2077 ntAPPRIS P3 TSL 1 (best) BASIC33.89■■■■□ 3.02
LOC102724428A0A0B4J2F2 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC33.88■■■■□ 3.01
LOC102724428A0A0B4J2F2 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC33.88■■■■□ 3.01
LOC102724428A0A0B4J2F2 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC33.88■■■■□ 3.01
LOC102724428A0A0B4J2F2 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC33.88■■■■□ 3.01
LOC102724428A0A0B4J2F2 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC33.88■■■■□ 3.01
LOC102724428A0A0B4J2F2 RASSF7-202ENST00000397583 1928 ntAPPRIS P3 TSL 1 (best) BASIC33.87■■■■□ 3.01
LOC102724428A0A0B4J2F2 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC33.87■■■■□ 3.01
LOC102724428A0A0B4J2F2 TPT1-202ENST00000379055 948 ntTSL 2 BASIC33.87■■■■□ 3.01
LOC102724428A0A0B4J2F2 RNF126P1-201ENST00000567452 1320 ntBASIC33.86■■■■□ 3.01
LOC102724428A0A0B4J2F2 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC33.86■■■■□ 3.01
LOC102724428A0A0B4J2F2 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC33.86■■■■□ 3.01
LOC102724428A0A0B4J2F2 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC33.86■■■■□ 3.01
LOC102724428A0A0B4J2F2 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC33.85■■■■□ 3.01
LOC102724428A0A0B4J2F2 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC33.85■■■■□ 3.01
LOC102724428A0A0B4J2F2 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC33.84■■■■□ 3.01
LOC102724428A0A0B4J2F2 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC33.84■■■■□ 3.01
LOC102724428A0A0B4J2F2 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC33.84■■■■□ 3.01
LOC102724428A0A0B4J2F2 MTCP1-202ENST00000369476 2274 ntAPPRIS P1 TSL 3 BASIC33.83■■■■□ 3.01
LOC102724428A0A0B4J2F2 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC33.83■■■■□ 3.01
LOC102724428A0A0B4J2F2 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC33.83■■■■□ 3.01
LOC102724428A0A0B4J2F2 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC33.82■■■■□ 3
LOC102724428A0A0B4J2F2 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC33.82■■■■□ 3
LOC102724428A0A0B4J2F2 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC33.82■■■■□ 3
LOC102724428A0A0B4J2F2 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC33.81■■■■□ 3
LOC102724428A0A0B4J2F2 C11orf63-202ENST00000307257 1964 ntTSL 2 BASIC33.81■■■■□ 3
LOC102724428A0A0B4J2F2 AL161658.1-201ENST00000623641 1967 ntBASIC33.8■■■■□ 3
LOC102724428A0A0B4J2F2 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC33.79■■■■□ 3
LOC102724428A0A0B4J2F2 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC33.79■■■■□ 3
LOC102724428A0A0B4J2F2 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC33.77■■■■□ 3
LOC102724428A0A0B4J2F2 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC33.77■■■■□ 3
LOC102724428A0A0B4J2F2 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC33.77■■■■□ 3
LOC102724428A0A0B4J2F2 CEP120-209ENST00000515110 606 ntTSL 3 BASIC33.77■■■■□ 3
LOC102724428A0A0B4J2F2 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC33.76■■■■□ 3
LOC102724428A0A0B4J2F2 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC33.76■■■■□ 3
LOC102724428A0A0B4J2F2 OLFM2-201ENST00000264833 2019 ntAPPRIS P1 TSL 1 (best) BASIC33.75■■■□□ 2.99
LOC102724428A0A0B4J2F2 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC33.75■■■□□ 2.99
LOC102724428A0A0B4J2F2 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC33.74■■■□□ 2.99
LOC102724428A0A0B4J2F2 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC33.74■■■□□ 2.99
LOC102724428A0A0B4J2F2 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC33.73■■■□□ 2.99
LOC102724428A0A0B4J2F2 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC33.73■■■□□ 2.99
LOC102724428A0A0B4J2F2 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC33.7■■■□□ 2.99
LOC102724428A0A0B4J2F2 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC33.7■■■□□ 2.99
LOC102724428A0A0B4J2F2 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC33.7■■■□□ 2.99
LOC102724428A0A0B4J2F2 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC33.7■■■□□ 2.99
LOC102724428A0A0B4J2F2 SIAH1-203ENST00000394725 2147 ntAPPRIS P3 TSL 1 (best) BASIC33.7■■■□□ 2.98
LOC102724428A0A0B4J2F2 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC33.69■■■□□ 2.98
LOC102724428A0A0B4J2F2 AC010864.1-201ENST00000609407 1511 ntBASIC33.69■■■□□ 2.98
LOC102724428A0A0B4J2F2 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC33.68■■■□□ 2.98
LOC102724428A0A0B4J2F2 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC33.68■■■□□ 2.98
LOC102724428A0A0B4J2F2 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC33.68■■■□□ 2.98
LOC102724428A0A0B4J2F2 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC33.68■■■□□ 2.98
LOC102724428A0A0B4J2F2 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC33.68■■■□□ 2.98
LOC102724428A0A0B4J2F2 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC33.66■■■□□ 2.98
LOC102724428A0A0B4J2F2 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC33.66■■■□□ 2.98
LOC102724428A0A0B4J2F2 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC33.66■■■□□ 2.98
LOC102724428A0A0B4J2F2 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC33.65■■■□□ 2.98
LOC102724428A0A0B4J2F2 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC33.65■■■□□ 2.98
LOC102724428A0A0B4J2F2 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC33.65■■■□□ 2.98
LOC102724428A0A0B4J2F2 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC33.65■■■□□ 2.98
LOC102724428A0A0B4J2F2 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC33.65■■■□□ 2.98
LOC102724428A0A0B4J2F2 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC33.64■■■□□ 2.98
LOC102724428A0A0B4J2F2 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC33.64■■■□□ 2.98
LOC102724428A0A0B4J2F2 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC33.64■■■□□ 2.98
LOC102724428A0A0B4J2F2 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC33.63■■■□□ 2.97
LOC102724428A0A0B4J2F2 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC33.63■■■□□ 2.97
LOC102724428A0A0B4J2F2 AC022413.1-201ENST00000624602 984 ntBASIC33.63■■■□□ 2.97
LOC102724428A0A0B4J2F2 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC33.61■■■□□ 2.97
LOC102724428A0A0B4J2F2 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC33.61■■■□□ 2.97
LOC102724428A0A0B4J2F2 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC33.6■■■□□ 2.97
LOC102724428A0A0B4J2F2 NTF6A-201ENST00000591175 560 ntBASIC33.59■■■□□ 2.97
LOC102724428A0A0B4J2F2 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC33.59■■■□□ 2.97
LOC102724428A0A0B4J2F2 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC33.58■■■□□ 2.97
LOC102724428A0A0B4J2F2 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC33.58■■■□□ 2.97
LOC102724428A0A0B4J2F2 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC33.58■■■□□ 2.97
LOC102724428A0A0B4J2F2 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC33.58■■■□□ 2.97
LOC102724428A0A0B4J2F2 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC33.58■■■□□ 2.97
LOC102724428A0A0B4J2F2 CISD3-204ENST00000613478 2074 ntAPPRIS P1 TSL 2 BASIC33.57■■■□□ 2.97
LOC102724428A0A0B4J2F2 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC33.56■■■□□ 2.96
LOC102724428A0A0B4J2F2 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC33.56■■■□□ 2.96
LOC102724428A0A0B4J2F2 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC33.55■■■□□ 2.96
LOC102724428A0A0B4J2F2 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC33.54■■■□□ 2.96
LOC102724428A0A0B4J2F2 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC33.54■■■□□ 2.96
LOC102724428A0A0B4J2F2 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC33.53■■■□□ 2.96
LOC102724428A0A0B4J2F2 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC33.53■■■□□ 2.96
LOC102724428A0A0B4J2F2 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC33.53■■■□□ 2.96
LOC102724428A0A0B4J2F2 AC008813.1-201ENST00000536597 885 ntBASIC33.53■■■□□ 2.96
LOC102724428A0A0B4J2F2 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC33.51■■■□□ 2.96
LOC102724428A0A0B4J2F2 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC33.51■■■□□ 2.95
LOC102724428A0A0B4J2F2 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC33.51■■■□□ 2.95
LOC102724428A0A0B4J2F2 AC012354.3-201ENST00000623734 483 ntBASIC33.51■■■□□ 2.95
LOC102724428A0A0B4J2F2 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC33.51■■■□□ 2.95
LOC102724428A0A0B4J2F2 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC33.5■■■□□ 2.95
LOC102724428A0A0B4J2F2 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC33.49■■■□□ 2.95
LOC102724428A0A0B4J2F2 HES4-202ENST00000428771 1040 ntTSL 2 BASIC33.49■■■□□ 2.95
LOC102724428A0A0B4J2F2 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC33.48■■■□□ 2.95
LOC102724428A0A0B4J2F2 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC33.48■■■□□ 2.95
LOC102724428A0A0B4J2F2 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC33.47■■■□□ 2.95
LOC102724428A0A0B4J2F2 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC33.46■■■□□ 2.95
LOC102724428A0A0B4J2F2 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC33.45■■■□□ 2.94
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms