Protein–RNA interactions for Protein: A0A0B4J1U6

TRBV9, T-cell receptor beta variable 9 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV9A0A0B4J1U6 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
TRBV9A0A0B4J1U6 RPS2-209ENST00000529806 993 ntTSL 3 BASIC20.5■□□□□ 0.87
TRBV9A0A0B4J1U6 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
TRBV9A0A0B4J1U6 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
TRBV9A0A0B4J1U6 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC20.49■□□□□ 0.87
TRBV9A0A0B4J1U6 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
TRBV9A0A0B4J1U6 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC20.49■□□□□ 0.87
TRBV9A0A0B4J1U6 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
TRBV9A0A0B4J1U6 MIR3665-201ENST00000578708 105 ntBASIC20.48■□□□□ 0.87
TRBV9A0A0B4J1U6 DUX4L28-201ENST00000623687 678 ntBASIC20.48■□□□□ 0.87
TRBV9A0A0B4J1U6 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
TRBV9A0A0B4J1U6 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
TRBV9A0A0B4J1U6 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
TRBV9A0A0B4J1U6 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
TRBV9A0A0B4J1U6 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC20.47■□□□□ 0.87
TRBV9A0A0B4J1U6 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC20.47■□□□□ 0.87
TRBV9A0A0B4J1U6 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
TRBV9A0A0B4J1U6 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
TRBV9A0A0B4J1U6 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
TRBV9A0A0B4J1U6 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
TRBV9A0A0B4J1U6 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
TRBV9A0A0B4J1U6 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
TRBV9A0A0B4J1U6 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
TRBV9A0A0B4J1U6 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
TRBV9A0A0B4J1U6 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
TRBV9A0A0B4J1U6 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
TRBV9A0A0B4J1U6 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
TRBV9A0A0B4J1U6 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
TRBV9A0A0B4J1U6 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC20.44■□□□□ 0.86
TRBV9A0A0B4J1U6 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
TRBV9A0A0B4J1U6 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC20.44■□□□□ 0.86
TRBV9A0A0B4J1U6 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC20.44■□□□□ 0.86
TRBV9A0A0B4J1U6 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
TRBV9A0A0B4J1U6 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
TRBV9A0A0B4J1U6 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC20.44■□□□□ 0.86
TRBV9A0A0B4J1U6 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
TRBV9A0A0B4J1U6 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
TRBV9A0A0B4J1U6 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
TRBV9A0A0B4J1U6 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC20.43■□□□□ 0.86
TRBV9A0A0B4J1U6 NRG1-221ENST00000614767 762 ntTSL 5 BASIC20.43■□□□□ 0.86
TRBV9A0A0B4J1U6 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC20.42■□□□□ 0.86
TRBV9A0A0B4J1U6 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC20.42■□□□□ 0.86
TRBV9A0A0B4J1U6 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
TRBV9A0A0B4J1U6 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
TRBV9A0A0B4J1U6 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC20.42■□□□□ 0.86
TRBV9A0A0B4J1U6 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
TRBV9A0A0B4J1U6 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
TRBV9A0A0B4J1U6 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
TRBV9A0A0B4J1U6 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
TRBV9A0A0B4J1U6 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC20.4■□□□□ 0.86
TRBV9A0A0B4J1U6 AC142086.6-201ENST00000621154 1765 ntBASIC20.4■□□□□ 0.86
TRBV9A0A0B4J1U6 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
TRBV9A0A0B4J1U6 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC20.39■□□□□ 0.85
TRBV9A0A0B4J1U6 AL162393.1-201ENST00000437852 946 ntBASIC20.39■□□□□ 0.85
TRBV9A0A0B4J1U6 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC20.39■□□□□ 0.85
TRBV9A0A0B4J1U6 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC20.38■□□□□ 0.85
TRBV9A0A0B4J1U6 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
TRBV9A0A0B4J1U6 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
TRBV9A0A0B4J1U6 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
TRBV9A0A0B4J1U6 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
TRBV9A0A0B4J1U6 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC20.37■□□□□ 0.85
TRBV9A0A0B4J1U6 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
TRBV9A0A0B4J1U6 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC20.36■□□□□ 0.85
TRBV9A0A0B4J1U6 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC20.36■□□□□ 0.85
TRBV9A0A0B4J1U6 AC087741.3-201ENST00000624270 1347 ntBASIC20.36■□□□□ 0.85
TRBV9A0A0B4J1U6 AC108673.1-201ENST00000510422 1159 ntBASIC20.36■□□□□ 0.85
TRBV9A0A0B4J1U6 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
TRBV9A0A0B4J1U6 CREM-210ENST00000374721 2020 ntTSL 5 BASIC20.36■□□□□ 0.85
TRBV9A0A0B4J1U6 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC20.35■□□□□ 0.85
TRBV9A0A0B4J1U6 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
TRBV9A0A0B4J1U6 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC20.35■□□□□ 0.85
TRBV9A0A0B4J1U6 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
TRBV9A0A0B4J1U6 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
TRBV9A0A0B4J1U6 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
TRBV9A0A0B4J1U6 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
TRBV9A0A0B4J1U6 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
TRBV9A0A0B4J1U6 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
TRBV9A0A0B4J1U6 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
TRBV9A0A0B4J1U6 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.84
TRBV9A0A0B4J1U6 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.84
TRBV9A0A0B4J1U6 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
TRBV9A0A0B4J1U6 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
TRBV9A0A0B4J1U6 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC20.32■□□□□ 0.84
TRBV9A0A0B4J1U6 AL139393.2-201ENST00000608721 2025 ntBASIC20.32■□□□□ 0.84
TRBV9A0A0B4J1U6 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC20.32■□□□□ 0.84
TRBV9A0A0B4J1U6 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
TRBV9A0A0B4J1U6 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
TRBV9A0A0B4J1U6 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
TRBV9A0A0B4J1U6 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
TRBV9A0A0B4J1U6 AC135731.1-201ENST00000569415 2548 ntBASIC20.3■□□□□ 0.84
TRBV9A0A0B4J1U6 AC127502.1-201ENST00000399971 1502 ntBASIC20.3■□□□□ 0.84
TRBV9A0A0B4J1U6 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
TRBV9A0A0B4J1U6 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
TRBV9A0A0B4J1U6 MIR6090-201ENST00000622481 60 ntBASIC20.29■□□□□ 0.84
TRBV9A0A0B4J1U6 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TRBV9A0A0B4J1U6 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TRBV9A0A0B4J1U6 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TRBV9A0A0B4J1U6 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TRBV9A0A0B4J1U6 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC20.28■□□□□ 0.84
TRBV9A0A0B4J1U6 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 18.4 ms