Protein–RNA interactions for Protein: O60832

DKC1, H/ACA ribonucleoprotein complex subunit 4, humanhuman

Known RBP eCLIP

Length 514 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DKC1O60832 CTNNA1-230ENST00000521724 2741 ntTSL 210.01□□□□□ -0.814e-9■■■□□ 16.1
DKC1O60832 CTNNA1-243ENST00000540387 2684 ntTSL 1 (best) BASIC10□□□□□ -0.814e-9■■■□□ 16.1
DKC1O60832 CTNNA1-210ENST00000518825 3536 ntTSL 1 (best) BASIC8.92□□□□□ -0.984e-9■■■□□ 16.1
DKC1O60832 CTNNA1-201ENST00000302763 3756 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.144e-9■■■□□ 16.1
DKC1O60832 CTNNA1-244ENST00000627109 3831 ntTSL 5 BASIC7.66□□□□□ -1.184e-9■■■□□ 16.1
DKC1O60832 CTNNA1-202ENST00000517533 579 ntTSL 36.38□□□□□ -1.394e-9■■■□□ 16.1
DKC1O60832 CTNNA1-239ENST00000523685 694 ntTSL 35.79□□□□□ -1.484e-9■■■□□ 16.1
DKC1O60832 CTNNA1-233ENST00000522052 579 ntTSL 45.34□□□□□ -1.554e-9■■■□□ 16.1
DKC1O60832 CTNNA1-232ENST00000522013 874 ntTSL 35.31□□□□□ -1.564e-9■■■□□ 16.1
DKC1O60832 CTNNA1-222ENST00000520400 589 ntTSL 44.31□□□□□ -1.724e-9■■■□□ 16.1
DKC1O60832 CTNNA1-238ENST00000523298 577 ntTSL 24.31□□□□□ -1.724e-9■■■□□ 16.1
DKC1O60832 WAC-212ENST00000448193 506 ntTSL 229.84■■■□□ 2.372e-6■■■□□ 16.1
DKC1O60832 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.12e-6■■■□□ 16.1
DKC1O60832 CDC34-205ENST00000606065 1062 ntTSL 525.12■■□□□ 1.612e-6■■■□□ 16.1
DKC1O60832 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC24.35■■□□□ 1.492e-6■■■□□ 16.1
DKC1O60832 DEF8-221ENST00000567999 578 ntTSL 1 (best)24.26■■□□□ 1.472e-6■■■□□ 16.1
DKC1O60832 CHD9-208ENST00000563410 488 ntTSL 223.46■■□□□ 1.352e-6■■■□□ 16.1
DKC1O60832 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC21.86■■□□□ 1.092e-6■■■□□ 16.1
DKC1O60832 WAC-211ENST00000442148 759 ntTSL 521.76■■□□□ 1.072e-6■■■□□ 16.1
DKC1O60832 CDC34-206ENST00000606400 899 ntTSL 221.24■□□□□ 0.992e-6■■■□□ 16.1
DKC1O60832 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC20.96■□□□□ 0.952e-6■■■□□ 16.1
DKC1O60832 DEF8-224ENST00000569061 651 ntTSL 520.57■□□□□ 0.882e-6■■■□□ 16.1
DKC1O60832 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC20.53■□□□□ 0.882e-6■■■□□ 16.1
DKC1O60832 NT5C2-207ENST00000461461 902 ntTSL 520.38■□□□□ 0.852e-6■■■□□ 16.1
DKC1O60832 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC20.38■□□□□ 0.852e-6■■■□□ 16.1
DKC1O60832 CDC34-202ENST00000586283 1147 ntTSL 320.35■□□□□ 0.852e-6■■■□□ 16.1
DKC1O60832 DEF8-204ENST00000561784 612 ntTSL 420.11■□□□□ 0.812e-6■■■□□ 16.1
DKC1O60832 TNFAIP3-203ENST00000421450 421 ntTSL 219.75■□□□□ 0.752e-6■■■□□ 16.1
DKC1O60832 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.742e-6■■■□□ 16.1
DKC1O60832 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC19.51■□□□□ 0.712e-6■■■□□ 16.1
DKC1O60832 OTX1-203ENST00000405984 1694 ntTSL 219.27■□□□□ 0.682e-6■■■□□ 16.1
DKC1O60832 WAC-202ENST00000347934 2839 ntTSL 5 BASIC18.98■□□□□ 0.632e-6■■■□□ 16.1
DKC1O60832 STAP2-205ENST00000599736 2043 ntTSL 218.93■□□□□ 0.622e-6■■■□□ 16.1
DKC1O60832 DEF8-217ENST00000566820 549 ntTSL 418.61■□□□□ 0.572e-6■■■□□ 16.1
DKC1O60832 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC18.48■□□□□ 0.552e-6■■■□□ 16.1
DKC1O60832 STAP2-208ENST00000601482 837 ntTSL 518.4■□□□□ 0.542e-6■■■□□ 16.1
DKC1O60832 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.511e-11■■■□□ 16.1
DKC1O60832 DEF8-203ENST00000561741 580 ntTSL 417.84■□□□□ 0.452e-6■■■□□ 16.1
DKC1O60832 DEF8-216ENST00000566079 516 ntTSL 517.61■□□□□ 0.412e-6■■■□□ 16.1
DKC1O60832 DEF8-209ENST00000562986 468 ntTSL 417.59■□□□□ 0.412e-6■■■□□ 16.1
DKC1O60832 DEF8-222ENST00000568096 543 ntTSL 517.23■□□□□ 0.352e-6■■■□□ 16.1
DKC1O60832 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.312e-6■■■□□ 16.1
DKC1O60832 DEF8-208ENST00000562578 573 ntTSL 416.8■□□□□ 0.282e-6■■■□□ 16.1
DKC1O60832 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC16.72■□□□□ 0.272e-6■■■□□ 16.1
DKC1O60832 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.252e-6■■■□□ 16.1
DKC1O60832 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC16.6■□□□□ 0.252e-6■■■□□ 16.1
DKC1O60832 TNFAIP3-204ENST00000433680 465 ntTSL 316.57■□□□□ 0.242e-6■■■□□ 16.1
DKC1O60832 DEF8-226ENST00000569803 539 ntTSL 516.34■□□□□ 0.212e-6■■■□□ 16.1
DKC1O60832 DEF8-202ENST00000418391 852 ntTSL 2 BASIC16.23■□□□□ 0.192e-6■■■□□ 16.1
DKC1O60832 DEF8-219ENST00000567874 1554 ntTSL 2 BASIC16.17■□□□□ 0.182e-6■■■□□ 16.1
DKC1O60832 WAC-207ENST00000420266 784 ntTSL 515.6■□□□□ 0.092e-6■■■□□ 16.1
DKC1O60832 CDC34-207ENST00000607527 357 ntTSL 515.56■□□□□ 0.082e-6■■■□□ 16.1
DKC1O60832 DEF8-205ENST00000561959 558 ntTSL 515.54■□□□□ 0.082e-6■■■□□ 16.1
DKC1O60832 DEF8-220ENST00000567884 572 ntTSL 515.5■□□□□ 0.072e-6■■■□□ 16.1
DKC1O60832 CWC27-201ENST00000381070 2078 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.072e-6■■■□□ 16.1
DKC1O60832 BGN-204ENST00000480756 2278 ntTSL 515.3■□□□□ 0.042e-6■■■□□ 16.1
DKC1O60832 DEF8-218ENST00000567243 550 ntTSL 514.71□□□□□ -0.052e-6■■■□□ 16.1
DKC1O60832 USP2-AS1-202ENST00000500970 1784 ntTSL 2 BASIC14.35□□□□□ -0.112e-6■■■□□ 16.1
DKC1O60832 BGN-203ENST00000472615 2225 ntTSL 514.07□□□□□ -0.162e-6■■■□□ 16.1
DKC1O60832 TNFAIP3-206ENST00000612899 4735 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.192e-6■■■□□ 16.1
DKC1O60832 WAC-204ENST00000375646 2176 ntTSL 5 BASIC13.83□□□□□ -0.22e-6■■■□□ 16.1
DKC1O60832 BGN-201ENST00000331595 2402 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.212e-6■■■□□ 16.1
DKC1O60832 B4GALT1-201ENST00000379731 4201 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.352e-6■■■□□ 16.1
DKC1O60832 TNFAIP3-201ENST00000237289 4432 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.42e-6■■■□□ 16.1
DKC1O60832 IPO13-202ENST00000372343 3894 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.442e-6■■■□□ 16.1
DKC1O60832 DEF8-229ENST00000617948 3883 ntAPPRIS P4 TSL 5 BASIC12.29□□□□□ -0.442e-6■■■□□ 16.1
DKC1O60832 DEF8-227ENST00000570182 3549 ntAPPRIS ALT2 TSL 2 BASIC11.86□□□□□ -0.512e-6■■■□□ 16.1
DKC1O60832 DEF8-201ENST00000268676 3725 ntTSL 2 BASIC11.82□□□□□ -0.522e-6■■■□□ 16.1
DKC1O60832 TNFAIP3-202ENST00000420009 698 ntTSL 311.38□□□□□ -0.592e-6■■■□□ 16.1
DKC1O60832 MTSS1-218ENST00000529463 569 ntTSL 410.31□□□□□ -0.764e-7■■■□□ 16.1
DKC1O60832 USP2-AS1-201ENST00000498979 2486 ntTSL 3 BASIC9.55□□□□□ -0.882e-6■■■□□ 16.1
DKC1O60832 NT5C2-201ENST00000343289 3435 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.92e-6■■■□□ 16.1
DKC1O60832 USP2-AS1-205ENST00000578923 895 ntTSL 2 BASIC8.81□□□□□ -12e-6■■■□□ 16.1
DKC1O60832 SNORA51.7-201ENST00000384171 134 ntBASIC8.43□□□□□ -1.062e-6■■■□□ 16.1
DKC1O60832 NT5C2-203ENST00000404739 3365 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.112e-6■■■□□ 16.1
DKC1O60832 NT5C2-202ENST00000369857 2625 ntTSL 27.46□□□□□ -1.222e-6■■■□□ 16.1
DKC1O60832 HSD17B4-227ENST00000522415 900 ntTSL 57.34□□□□□ -1.232e-6■■■□□ 16.1
DKC1O60832 ENPP3-203ENST00000414305 3418 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.272e-6■■■□□ 16.1
DKC1O60832 HSD17B4-213ENST00000509606 844 ntTSL 27.01□□□□□ -1.292e-6■■■□□ 16.1
DKC1O60832 CHD9-217ENST00000565832 2169 ntTSL 1 (best)6.78□□□□□ -1.322e-6■■■□□ 16.1
DKC1O60832 NT5C2-205ENST00000452156 856 ntTSL 55.76□□□□□ -1.492e-6■■■□□ 16.1
DKC1O60832 WAC-209ENST00000428935 1320 ntTSL 2 BASIC5.62□□□□□ -1.512e-6■■■□□ 16.1
DKC1O60832 WAC-208ENST00000424454 1330 ntTSL 25.61□□□□□ -1.512e-6■■■□□ 16.1
DKC1O60832 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC5.12□□□□□ -1.592e-6■■■□□ 16.1
DKC1O60832 ENPP3-201ENST00000357639 3162 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.592e-6■■■□□ 16.1
DKC1O60832 WAC-210ENST00000439676 2762 ntTSL 55.1□□□□□ -1.592e-6■■■□□ 16.1
DKC1O60832 WAC-221ENST00000628285 2740 ntTSL 1 (best) BASIC4.88□□□□□ -1.632e-6■■■□□ 16.1
DKC1O60832 WAC-201ENST00000345541 4526 ntTSL 1 (best)4.49□□□□□ -1.692e-6■■■□□ 16.1
DKC1O60832 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC4.4□□□□□ -1.72e-6■■■□□ 16.1
DKC1O60832 WAC-206ENST00000414108 816 ntTSL 34.1□□□□□ -1.752e-6■■■□□ 16.1
DKC1O60832 HSD17B4-214ENST00000509951 736 ntTSL 54.04□□□□□ -1.762e-6■■■□□ 16.1
DKC1O60832 CWC27-205ENST00000545000 881 ntTSL 23.86□□□□□ -1.792e-6■■■□□ 16.1
DKC1O60832 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.82e-6■■■□□ 16.1
DKC1O60832 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC3.13□□□□□ -1.912e-6■■■□□ 16.1
DKC1O60832 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.912e-6■■■□□ 16.1
DKC1O60832 NKD1-201ENST00000268459 17105 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.741e-7■■■□□ 16.1
DKC1O60832 AP1G1-215ENST00000568327 1724 ntTSL 520.67■□□□□ 0.95e-42■■■□□ 16.1
DKC1O60832 AP1G1-208ENST00000565009 2494 ntTSL 514.71□□□□□ -0.055e-42■■■□□ 16.1
DKC1O60832 AP1G1-218ENST00000569748 4554 ntAPPRIS P3 TSL 2 BASIC13.57□□□□□ -0.245e-42■■■□□ 16.1
DKC1O60832 AP1G1-202ENST00000393512 3593 ntAPPRIS ALT1 TSL 5 BASIC10.36□□□□□ -0.755e-42■■■□□ 16.1
Retrieved 100 of 8,567 protein–RNA pairs in 672.5 ms