RNA–Protein interactions for RNA: ENST00000563795.1

DEF8-211, Transcript of differentially expressed in FDCP 8 homolog, humanhuman

TSL 5 BASIC

Gene DEF8, Length 1,767 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEF8-211ENST00000563795 NISCHQ9Y2I1 1504 aa41.26■■■■■ 4.2
DEF8-211ENST00000563795 CCDC180Q9P1Z9 1646 aa36.09■■■■□ 3.37
DEF8-211ENST00000563795 ZCCHC6Q5VYS8 1495 aaKnown RBP34.63■■■■□ 3.13
DEF8-211ENST00000563795 ABCC9O60706 1549 aa34.3■■■■□ 3.08
DEF8-211ENST00000563795 DCAF8L2P0C7V8 631 aa34.25■■■■□ 3.07
DEF8-211ENST00000563795 DCAF1Q9Y4B6 1507 aa34.09■■■■□ 3.05
DEF8-211ENST00000563795 MYO15BQ96JP2 1530 aa33.73■■■□□ 2.99
DEF8-211ENST00000563795 SHROOM4Q9ULL8 1493 aa33.72■■■□□ 2.99
DEF8-211ENST00000563795 NACADO15069 1562 aa33.64■■■□□ 2.98
DEF8-211ENST00000563795 RB1CC1Q8TDY2 1594 aa33.42■■■□□ 2.94
DEF8-211ENST00000563795 SCRIBQ14160 1630 aa33.21■■■□□ 2.91
DEF8-211ENST00000563795 SUPT5HO00267 1087 aaKnown RBP32.91■■■□□ 2.86
DEF8-211ENST00000563795 UNC13AQ9UPW8 1703 aa32.76■■■□□ 2.83
DEF8-211ENST00000563795 BICRAQ9NZM4 1560 aa32.39■■■□□ 2.78
DEF8-211ENST00000563795 PABPN1Q86U42 306 aaKnown RBP eCLIP32.3■■■□□ 2.76
DEF8-211ENST00000563795 CECR2Q9BXF3 1484 aa32.06■■■□□ 2.72
DEF8-211ENST00000563795 RSF1Q96T23 1441 aaPredicted RBP31.94■■■□□ 2.7
DEF8-211ENST00000563795 BAZ1AQ9NRL2 1556 aaPredicted RBP31.91■■■□□ 2.7
DEF8-211ENST00000563795 MROH2BQ7Z745 1585 aa31.88■■■□□ 2.69
DEF8-211ENST00000563795 CHIC1Q5VXU3 224 aa31.84■■■□□ 2.69
DEF8-211ENST00000563795 SMARCA4P51532 1647 aa31.78■■■□□ 2.68
DEF8-211ENST00000563795 WIZO95785 1651 aa31.64■■■□□ 2.66
DEF8-211ENST00000563795 EIF4G1Q04637 1599 aaKnown RBP31.43■■■□□ 2.62
DEF8-211ENST00000563795 PEG3Q9GZU2 1588 aa31.35■■■□□ 2.61
DEF8-211ENST00000563795 TOP2AP11388 1531 aaKnown RBP31.31■■■□□ 2.6
DEF8-211ENST00000563795 SMARCA2P51531 1590 aa31.29■■■□□ 2.6
DEF8-211ENST00000563795 ATAD2BQ9ULI0 1458 aa31.27■■■□□ 2.6
DEF8-211ENST00000563795 BAZ1BQ9UIG0 1483 aaKnown RBP31.14■■■□□ 2.58
DEF8-211ENST00000563795 CC2D2AQ9P2K1 1620 aa31.07■■■□□ 2.56
DEF8-211ENST00000563795 NCAPD3P42695 1498 aa31■■■□□ 2.55
DEF8-211ENST00000563795 HMGXB3Q12766 1538 aa30.99■■■□□ 2.55
DEF8-211ENST00000563795 CCDC88BA6NC98 1476 aa30.96■■■□□ 2.55
DEF8-211ENST00000563795 TRIM41Q8WV44 630 aa30.88■■■□□ 2.53
DEF8-211ENST00000563795 LOC105371045A0A1W2PR82 267 aa30.7■■■□□ 2.51
DEF8-211ENST00000563795 DNAJC5BQ9UF47 199 aa30.56■■■□□ 2.48
DEF8-211ENST00000563795 FAM9AQ8IZU1 332 aaPredicted RBP30.36■■■□□ 2.45
DEF8-211ENST00000563795 ABCC8Q09428 1581 aa30.3■■■□□ 2.44
DEF8-211ENST00000563795 CFTRP13569 1480 aa30.29■■■□□ 2.44
DEF8-211ENST00000563795 CADPSQ9ULU8 1353 aa30.23■■■□□ 2.43
DEF8-211ENST00000563795 PRDM2Q13029 1718 aa30.19■■■□□ 2.42
DEF8-211ENST00000563795 WRNQ14191 1432 aaPredicted RBP eCLIP30.12■■■□□ 2.41
DEF8-211ENST00000563795 PCGF6Q9BYE7 350 aa30.08■■■□□ 2.41
DEF8-211ENST00000563795 LAMC3Q9Y6N6 1575 aa30.03■■■□□ 2.4
DEF8-211ENST00000563795 NESP48681 1621 aa30.03■■■□□ 2.4
DEF8-211ENST00000563795 SYNJ1O43426 1573 aa29.99■■■□□ 2.39
DEF8-211ENST00000563795 FANCD2Q9BXW9 1451 aa29.93■■■□□ 2.38
DEF8-211ENST00000563795 EHMT2Q96KQ7 1210 aa29.91■■■□□ 2.38
DEF8-211ENST00000563795 TRIM26Q12899 539 aaPredicted RBP29.9■■■□□ 2.38
DEF8-211ENST00000563795 EEA1Q15075 1411 aa29.88■■■□□ 2.37
DEF8-211ENST00000563795 TOP2BQ02880 1626 aa29.88■■■□□ 2.37
DEF8-211ENST00000563795 BIVM-ERCC5R4GMW8 1640 aa29.85■■■□□ 2.37
DEF8-211ENST00000563795 CUX1P39880 1505 aa29.82■■■□□ 2.36
DEF8-211ENST00000563795 PDS5BQ9NTI5 1447 aa29.81■■■□□ 2.36
DEF8-211ENST00000563795 HRCP23327 699 aa29.78■■■□□ 2.36
DEF8-211ENST00000563795 CEP164Q9UPV0 1460 aa29.78■■■□□ 2.36
DEF8-211ENST00000563795 SOGA1O94964 1423 aa29.78■■■□□ 2.36
DEF8-211ENST00000563795 CSRNP3Q8WYN3 585 aa29.75■■■□□ 2.35
DEF8-211ENST00000563795 KIF21AQ7Z4S6 1674 aa29.7■■■□□ 2.35
DEF8-211ENST00000563795 DNMBPQ6XZF7 1577 aa29.63■■■□□ 2.33
DEF8-211ENST00000563795 RUSC2Q8N2Y8 1516 aa29.62■■■□□ 2.33
DEF8-211ENST00000563795 TNIKQ9UKE5 1360 aa29.58■■■□□ 2.33
DEF8-211ENST00000563795 TOPBP1Q92547 1522 aa29.57■■■□□ 2.32
DEF8-211ENST00000563795 FGD5Q6ZNL6 1462 aa29.55■■■□□ 2.32
DEF8-211ENST00000563795 URB2Q14146 1524 aaKnown RBP29.53■■■□□ 2.32
DEF8-211ENST00000563795 UBTFP17480 764 aaKnown RBP29.49■■■□□ 2.31
DEF8-211ENST00000563795 GOLGA3Q08378 1498 aa29.48■■■□□ 2.31
DEF8-211ENST00000563795 ERCC6Q03468 1493 aa29.47■■■□□ 2.31
DEF8-211ENST00000563795 MRC2Q9UBG0 1479 aa29.44■■■□□ 2.3
DEF8-211ENST00000563795 CEP162Q5TB80 1403 aa29.42■■■□□ 2.3
DEF8-211ENST00000563795 POLA1P09884 1462 aaPredicted RBP29.42■■■□□ 2.3
DEF8-211ENST00000563795 KIF27Q86VH2 1401 aa29.38■■■□□ 2.29
DEF8-211ENST00000563795 KIF21BO75037 1637 aa29.37■■■□□ 2.29
DEF8-211ENST00000563795 CUX2O14529 1486 aa29.35■■■□□ 2.29
DEF8-211ENST00000563795 RAD54L2Q9Y4B4 1467 aa29.33■■■□□ 2.29
DEF8-211ENST00000563795 THOC2Q8NI27 1593 aaKnown RBP29.32■■■□□ 2.28
DEF8-211ENST00000563795 WDR62O43379 1518 aa29.28■■■□□ 2.28
DEF8-211ENST00000563795 ABCA10Q8WWZ4 1543 aa29.26■■■□□ 2.27
DEF8-211ENST00000563795 PPARGC1BQ86YN6 1023 aaKnown RBP29.21■■■□□ 2.27
DEF8-211ENST00000563795 WDR97A6NE52 1622 aa29.19■■■□□ 2.26
DEF8-211ENST00000563795 ZEB1P37275 1124 aaPredicted RBP29.15■■■□□ 2.26
DEF8-211ENST00000563795 TARBP1Q13395 1621 aaKnown RBP29.12■■■□□ 2.25
DEF8-211ENST00000563795 RAPGEF2Q9Y4G8 1499 aa29.11■■■□□ 2.25
DEF8-211ENST00000563795 PRXQ9BXM0 1461 aa29.08■■■□□ 2.25
DEF8-211ENST00000563795 IGF1RP08069 1367 aa29.07■■■□□ 2.24
DEF8-211ENST00000563795 CLIP1P30622 1438 aa29.06■■■□□ 2.24
DEF8-211ENST00000563795 ERICH3Q5RHP9 1530 aa29.05■■■□□ 2.24
DEF8-211ENST00000563795 TDRD9Q8NDG6 1382 aaKnown RBP29.05■■■□□ 2.24
DEF8-211ENST00000563795 IFT140Q96RY7 1462 aa29.05■■■□□ 2.24
DEF8-211ENST00000563795 ABCA5Q8WWZ7 1642 aa29.05■■■□□ 2.24
DEF8-211ENST00000563795 GAPVD1Q14C86 1478 aa29.02■■■□□ 2.24
DEF8-211ENST00000563795 CARMIL1Q5VZK9 1371 aa28.97■■■□□ 2.23
DEF8-211ENST00000563795 CUL7Q14999 1698 aa28.94■■■□□ 2.22
DEF8-211ENST00000563795 PBRM1Q86U86 1689 aa28.89■■■□□ 2.22
DEF8-211ENST00000563795 AQRO60306 1485 aaKnown RBP eCLIP28.89■■■□□ 2.221e-6■■■■■ 38.7
DEF8-211ENST00000563795 VPS8Q8N3P4 1428 aa28.88■■■□□ 2.21
DEF8-211ENST00000563795 ZNF608Q9ULD9 1512 aaPredicted RBP28.87■■■□□ 2.21
DEF8-211ENST00000563795 APLP2Q06481 763 aa28.83■■■□□ 2.21
DEF8-211ENST00000563795 EIF4G3O43432 1585 aaKnown RBP28.82■■■□□ 2.2
DEF8-211ENST00000563795 GRIN2BQ13224 1484 aa28.81■■■□□ 2.2
DEF8-211ENST00000563795 TTBK1Q5TCY1 1321 aaPredicted RBP28.8■■■□□ 2.2
Retrieved 100 of 20,778 RNA–protein pairs in 71.6 ms