RNA–Protein interactions for RNA: ENST00000421450.1

TNFAIP3-203, Transcript of TNF alpha induced protein 3, humanhuman

TSL 2

Gene TNFAIP3, Length 421 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-203ENST00000421450 NISCHQ9Y2I1 1504 aa42.97■■■■■ 4.47
TNFAIP3-203ENST00000421450 CCDC180Q9P1Z9 1646 aa38.33■■■■□ 3.73
TNFAIP3-203ENST00000421450 ABCC9O60706 1549 aa37.9■■■■□ 3.66
TNFAIP3-203ENST00000421450 RB1CC1Q8TDY2 1594 aa36.27■■■■□ 3.4
TNFAIP3-203ENST00000421450 DCAF8L2P0C7V8 631 aa36.27■■■■□ 3.4
TNFAIP3-203ENST00000421450 NACADO15069 1562 aa36.12■■■■□ 3.37
TNFAIP3-203ENST00000421450 MYO15BQ96JP2 1530 aa35.73■■■■□ 3.31
TNFAIP3-203ENST00000421450 ZCCHC6Q5VYS8 1495 aaKnown RBP35.71■■■■□ 3.31
TNFAIP3-203ENST00000421450 DCAF1Q9Y4B6 1507 aa35.48■■■■□ 3.27
TNFAIP3-203ENST00000421450 UNC13AQ9UPW8 1703 aa35.42■■■■□ 3.26
TNFAIP3-203ENST00000421450 PABPN1Q86U42 306 aaKnown RBP eCLIP35.41■■■■□ 3.26
TNFAIP3-203ENST00000421450 BICRAQ9NZM4 1560 aa35.12■■■■□ 3.21
TNFAIP3-203ENST00000421450 DNAJC5BQ9UF47 199 aa35.03■■■■□ 3.2
TNFAIP3-203ENST00000421450 SCRIBQ14160 1630 aa35.03■■■■□ 3.2
TNFAIP3-203ENST00000421450 SHROOM4Q9ULL8 1493 aa34.71■■■■□ 3.15
TNFAIP3-203ENST00000421450 EIF4G1Q04637 1599 aaKnown RBP34.27■■■■□ 3.08
TNFAIP3-203ENST00000421450 CC2D2AQ9P2K1 1620 aa34.22■■■■□ 3.07
TNFAIP3-203ENST00000421450 CECR2Q9BXF3 1484 aa34.07■■■■□ 3.05
TNFAIP3-203ENST00000421450 SMARCA4P51532 1647 aa33.42■■■□□ 2.94
TNFAIP3-203ENST00000421450 BAZ1AQ9NRL2 1556 aaPredicted RBP33.35■■■□□ 2.93
TNFAIP3-203ENST00000421450 NCAPD3P42695 1498 aa33.32■■■□□ 2.92
TNFAIP3-203ENST00000421450 ATAD2BQ9ULI0 1458 aa33.31■■■□□ 2.92
TNFAIP3-203ENST00000421450 SMARCA2P51531 1590 aa33.28■■■□□ 2.92
TNFAIP3-203ENST00000421450 MROH2BQ7Z745 1585 aa33.13■■■□□ 2.89
TNFAIP3-203ENST00000421450 HMGXB3Q12766 1538 aa33.12■■■□□ 2.89
TNFAIP3-203ENST00000421450 BAZ1BQ9UIG0 1483 aaKnown RBP33.07■■■□□ 2.88
TNFAIP3-203ENST00000421450 PEG3Q9GZU2 1588 aa33.03■■■□□ 2.88
TNFAIP3-203ENST00000421450 WIZO95785 1651 aa32.78■■■□□ 2.84
TNFAIP3-203ENST00000421450 ERCC6Q03468 1493 aa32.74■■■□□ 2.83
TNFAIP3-203ENST00000421450 NESP48681 1621 aa32.68■■■□□ 2.82
TNFAIP3-203ENST00000421450 RSF1Q96T23 1441 aaPredicted RBP32.63■■■□□ 2.81
TNFAIP3-203ENST00000421450 LAMC3Q9Y6N6 1575 aa32.52■■■□□ 2.8
TNFAIP3-203ENST00000421450 CUX2O14529 1486 aa32.4■■■□□ 2.78
TNFAIP3-203ENST00000421450 TOP2AP11388 1531 aaKnown RBP32.39■■■□□ 2.78
TNFAIP3-203ENST00000421450 CADPSQ9ULU8 1353 aa32.38■■■□□ 2.77
TNFAIP3-203ENST00000421450 PDS5BQ9NTI5 1447 aa32.36■■■□□ 2.77
TNFAIP3-203ENST00000421450 KIF21AQ7Z4S6 1674 aa32.27■■■□□ 2.76
TNFAIP3-203ENST00000421450 THOC2Q8NI27 1593 aaKnown RBP32.19■■■□□ 2.74
TNFAIP3-203ENST00000421450 CFTRP13569 1480 aa32.09■■■□□ 2.73
TNFAIP3-203ENST00000421450 CCDC88BA6NC98 1476 aa32.03■■■□□ 2.72
TNFAIP3-203ENST00000421450 FANCD2Q9BXW9 1451 aa32.03■■■□□ 2.72
TNFAIP3-203ENST00000421450 MRC2Q9UBG0 1479 aa32.03■■■□□ 2.72
TNFAIP3-203ENST00000421450 CEP164Q9UPV0 1460 aa32.02■■■□□ 2.72
TNFAIP3-203ENST00000421450 WDR62O43379 1518 aa31.88■■■□□ 2.69
TNFAIP3-203ENST00000421450 PRDM2Q13029 1718 aa31.83■■■□□ 2.69
TNFAIP3-203ENST00000421450 DNAJC5Q9H3Z4 198 aa31.81■■■□□ 2.68
TNFAIP3-203ENST00000421450 SUPT5HO00267 1087 aaKnown RBP31.76■■■□□ 2.67
TNFAIP3-203ENST00000421450 URB2Q14146 1524 aaKnown RBP31.7■■■□□ 2.66
TNFAIP3-203ENST00000421450 TOPBP1Q92547 1522 aa31.46■■■□□ 2.63
TNFAIP3-203ENST00000421450 ABCC8Q09428 1581 aa31.45■■■□□ 2.63
TNFAIP3-203ENST00000421450 DNMBPQ6XZF7 1577 aa31.39■■■□□ 2.62
TNFAIP3-203ENST00000421450 IFT140Q96RY7 1462 aa31.35■■■□□ 2.61
TNFAIP3-203ENST00000421450 ZNF608Q9ULD9 1512 aaPredicted RBP31.23■■■□□ 2.59
TNFAIP3-203ENST00000421450 POLA1P09884 1462 aaPredicted RBP31.17■■■□□ 2.58
TNFAIP3-203ENST00000421450 TARBP1Q13395 1621 aaKnown RBP31.1■■■□□ 2.57
TNFAIP3-203ENST00000421450 CUX1P39880 1505 aa31.09■■■□□ 2.57
TNFAIP3-203ENST00000421450 OSCARQ8IYS5 282 aa31.09■■■□□ 2.57
TNFAIP3-203ENST00000421450 EIF4G3O43432 1585 aaKnown RBP31.09■■■□□ 2.57
TNFAIP3-203ENST00000421450 SOGA1O94964 1423 aa31.08■■■□□ 2.57
TNFAIP3-203ENST00000421450 FGD5Q6ZNL6 1462 aa31.08■■■□□ 2.57
TNFAIP3-203ENST00000421450 RAD54L2Q9Y4B4 1467 aa31.08■■■□□ 2.57
TNFAIP3-203ENST00000421450 AQRO60306 1485 aaKnown RBP eCLIP31.05■■■□□ 2.567e-6■■□□□ 13.1
TNFAIP3-203ENST00000421450 TDRD9Q8NDG6 1382 aaKnown RBP30.96■■■□□ 2.55
TNFAIP3-203ENST00000421450 FBLN2P98095 1184 aa30.87■■■□□ 2.53
TNFAIP3-203ENST00000421450 WDR97A6NE52 1622 aa30.83■■■□□ 2.53
TNFAIP3-203ENST00000421450 WRNQ14191 1432 aaPredicted RBP eCLIP30.82■■■□□ 2.52
TNFAIP3-203ENST00000421450 CHD1O14646 1710 aa30.78■■■□□ 2.52
TNFAIP3-203ENST00000421450 TRIM41Q8WV44 630 aa30.76■■■□□ 2.51
TNFAIP3-203ENST00000421450 TOP2BQ02880 1626 aa30.74■■■□□ 2.51
TNFAIP3-203ENST00000421450 SNAPC4Q5SXM2 1469 aa30.74■■■□□ 2.51
TNFAIP3-203ENST00000421450 BIVM-ERCC5R4GMW8 1640 aa30.73■■■□□ 2.51
TNFAIP3-203ENST00000421450 GRIN2BQ13224 1484 aa30.73■■■□□ 2.51
TNFAIP3-203ENST00000421450 SYNJ1O43426 1573 aa30.73■■■□□ 2.51
TNFAIP3-203ENST00000421450 ABCA10Q8WWZ4 1543 aa30.72■■■□□ 2.51
TNFAIP3-203ENST00000421450 GAPVD1Q14C86 1478 aa30.7■■■□□ 2.51
TNFAIP3-203ENST00000421450 CHMP7Q8WUX9 453 aaPredicted RBP30.68■■■□□ 2.5
TNFAIP3-203ENST00000421450 MAGI1Q96QZ7 1491 aaPredicted RBP30.67■■■□□ 2.5
TNFAIP3-203ENST00000421450 PBRM1Q86U86 1689 aa30.65■■■□□ 2.5
TNFAIP3-203ENST00000421450 ABCA5Q8WWZ7 1642 aa30.61■■■□□ 2.49
TNFAIP3-203ENST00000421450 RIMBP3CA6NJZ7 1639 aa30.57■■■□□ 2.48
TNFAIP3-203ENST00000421450 RIMBP3BA6NNM3 1639 aa30.57■■■□□ 2.48
TNFAIP3-203ENST00000421450 RIMBP3Q9UFD9 1639 aa30.57■■■□□ 2.48
TNFAIP3-203ENST00000421450 SYNJ2O15056 1496 aa30.56■■■□□ 2.48
TNFAIP3-203ENST00000421450 ARHGEF11O15085 1522 aa30.52■■■□□ 2.48
TNFAIP3-203ENST00000421450 CLASP1Q7Z460 1538 aa30.38■■■□□ 2.45
TNFAIP3-203ENST00000421450 CYB5RLQ6IPT4 315 aa30.36■■■□□ 2.45
TNFAIP3-203ENST00000421450 ADAMTS12P58397 1594 aa30.36■■■□□ 2.45
TNFAIP3-203ENST00000421450 ERICH3Q5RHP9 1530 aa30.35■■■□□ 2.45
TNFAIP3-203ENST00000421450 GRIN2AQ12879 1464 aa30.32■■■□□ 2.44
TNFAIP3-203ENST00000421450 FHAD1B1AJZ9 1412 aa30.32■■■□□ 2.44
TNFAIP3-203ENST00000421450 ARAP1Q96P48 1450 aa30.25■■■□□ 2.43
TNFAIP3-203ENST00000421450 KIF27Q86VH2 1401 aa30.22■■■□□ 2.43
TNFAIP3-203ENST00000421450 CEP170Q5SW79 1584 aa30.18■■■□□ 2.42
TNFAIP3-203ENST00000421450 NUP160Q12769 1436 aa30.16■■■□□ 2.42
TNFAIP3-203ENST00000421450 IGF1RP08069 1367 aa30.1■■■□□ 2.41
TNFAIP3-203ENST00000421450 CUL7Q14999 1698 aa30.04■■■□□ 2.4
TNFAIP3-203ENST00000421450 ERCC6L2Q5T890 1561 aa29.98■■■□□ 2.39
TNFAIP3-203ENST00000421450 SHROOM2Q13796 1616 aa29.96■■■□□ 2.39
TNFAIP3-203ENST00000421450 CARMIL1Q5VZK9 1371 aa29.95■■■□□ 2.39
TNFAIP3-203ENST00000421450 JPH4Q96JJ6 628 aa29.95■■■□□ 2.39
Retrieved 100 of 20,778 RNA–protein pairs in 110.2 ms