RNA–Protein interactions for RNA: ENST00000522013.5

CTNNA1-232, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 874 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-232ENST00000522013 AEBP2Q6ZN18 517 aaPredicted RBP17.07■□□□□ 0.32
CTNNA1-232ENST00000522013 CHIC1Q5VXU3 224 aa16.31■□□□□ 0.2
CTNNA1-232ENST00000522013 PHF23Q9BUL5 403 aaPredicted RBP14.47□□□□□ -0.09
CTNNA1-232ENST00000522013 SENP3Q9H4L4 574 aaPredicted RBP14.41□□□□□ -0.1
CTNNA1-232ENST00000522013 FOXD1Q16676 465 aa13.5□□□□□ -0.25
CTNNA1-232ENST00000522013 PLPPR3Q6T4P5 718 aa13.41□□□□□ -0.26
CTNNA1-232ENST00000522013 NISCHQ9Y2I1 1504 aa12.86□□□□□ -0.35
CTNNA1-232ENST00000522013 PPP6R1Q9UPN7 881 aa12.75□□□□□ -0.37
CTNNA1-232ENST00000522013 ADRA2BP18089 450 aa12.69□□□□□ -0.38
CTNNA1-232ENST00000522013 PIAS4Q8N2W9 510 aaPredicted RBP12.56□□□□□ -0.4
CTNNA1-232ENST00000522013 MSH5O43196 834 aa12.49□□□□□ -0.41
CTNNA1-232ENST00000522013 ABCC9O60706 1549 aa12.4□□□□□ -0.42
CTNNA1-232ENST00000522013 KCNA4P22459 653 aa12.28□□□□□ -0.44
CTNNA1-232ENST00000522013 POTEDQ86YR6 584 aa12.09□□□□□ -0.47
CTNNA1-232ENST00000522013 DNAJC5BQ9UF47 199 aa12.03□□□□□ -0.48
CTNNA1-232ENST00000522013 EHMT2Q96KQ7 1210 aa12.02□□□□□ -0.49
CTNNA1-232ENST00000522013 PPP4R3CPQ6ZMV5 832 aa11.93□□□□□ -0.5
CTNNA1-232ENST00000522013 CCDC180Q9P1Z9 1646 aa11.86□□□□□ -0.51
CTNNA1-232ENST00000522013 SLC4A1APQ9BWU0 796 aaKnown RBP11.72□□□□□ -0.53
CTNNA1-232ENST00000522013 NCBP3Q53F19 620 aaKnown RBP11.66□□□□□ -0.54
CTNNA1-232ENST00000522013 CSRNP3Q8WYN3 585 aa11.65□□□□□ -0.54
CTNNA1-232ENST00000522013 NPM3O75607 178 aaKnown RBP11.62□□□□□ -0.55
CTNNA1-232ENST00000522013 MAPK8IP2Q13387 824 aaPredicted RBP11.62□□□□□ -0.55
CTNNA1-232ENST00000522013 RB1CC1Q8TDY2 1594 aa11.54□□□□□ -0.56
CTNNA1-232ENST00000522013 DMRT2Q9Y5R5 561 aa11.49□□□□□ -0.57
CTNNA1-232ENST00000522013 SCAF1Q9H7N4 1312 aaKnown RBP11.45□□□□□ -0.58
CTNNA1-232ENST00000522013 DNAJC5Q9H3Z4 198 aa11.45□□□□□ -0.58
CTNNA1-232ENST00000522013 CNKSR2Q8WXI2 1034 aa11.43□□□□□ -0.58
CTNNA1-232ENST00000522013 PABPN1Q86U42 306 aaKnown RBP eCLIP11.42□□□□□ -0.58
CTNNA1-232ENST00000522013 UNC13AQ9UPW8 1703 aa11.4□□□□□ -0.58
CTNNA1-232ENST00000522013 ZBTB22O15209 634 aa11.37□□□□□ -0.59
CTNNA1-232ENST00000522013 NACADO15069 1562 aa11.28□□□□□ -0.6
CTNNA1-232ENST00000522013 BICRAQ9NZM4 1560 aa11.2□□□□□ -0.62
CTNNA1-232ENST00000522013 CECR2Q9BXF3 1484 aa11.19□□□□□ -0.62
CTNNA1-232ENST00000522013 CC2D2AQ9P2K1 1620 aa11.19□□□□□ -0.62
CTNNA1-232ENST00000522013 DCAF8L2P0C7V8 631 aa11.17□□□□□ -0.62
CTNNA1-232ENST00000522013 HOXD11P31277 338 aaPredicted RBP11.14□□□□□ -0.63
CTNNA1-232ENST00000522013 RNF216Q9NWF9 866 aaPredicted RBP11.1□□□□□ -0.63
CTNNA1-232ENST00000522013 FOXD4L1Q9NU39 408 aa11.08□□□□□ -0.64
CTNNA1-232ENST00000522013 EIF4G1Q04637 1599 aaKnown RBP10.99□□□□□ -0.65
CTNNA1-232ENST00000522013 SHROOM4Q9ULL8 1493 aa10.93□□□□□ -0.66
CTNNA1-232ENST00000522013 DCAF8L1A6NGE4 600 aa10.88□□□□□ -0.67
CTNNA1-232ENST00000522013 SLC4A2P04920 1241 aa10.88□□□□□ -0.67
CTNNA1-232ENST00000522013 CUX2O14529 1486 aa10.87□□□□□ -0.67
CTNNA1-232ENST00000522013 MYO15BQ96JP2 1530 aa10.87□□□□□ -0.67
CTNNA1-232ENST00000522013 TRIM41Q8WV44 630 aa10.84□□□□□ -0.67
CTNNA1-232ENST00000522013 SCRIBQ14160 1630 aa10.82□□□□□ -0.68
CTNNA1-232ENST00000522013 ERCC6Q03468 1493 aa10.77□□□□□ -0.69
CTNNA1-232ENST00000522013 RNF39Q9H2S5 420 aa10.74□□□□□ -0.69
CTNNA1-232ENST00000522013 MYCNP04198 464 aaPredicted RBP10.66□□□□□ -0.7
CTNNA1-232ENST00000522013 CACNB1Q02641 598 aaPredicted RBP10.63□□□□□ -0.71
CTNNA1-232ENST00000522013 ATXN8OSP0DMR3 200 aa10.6□□□□□ -0.71
CTNNA1-232ENST00000522013 C1QBPQ07021 282 aaKnown RBP10.54□□□□□ -0.72
CTNNA1-232ENST00000522013 ZCCHC6Q5VYS8 1495 aaKnown RBP10.54□□□□□ -0.72
CTNNA1-232ENST00000522013 DCAF1Q9Y4B6 1507 aa10.53□□□□□ -0.72
CTNNA1-232ENST00000522013 THOC2Q8NI27 1593 aaKnown RBP10.51□□□□□ -0.73
CTNNA1-232ENST00000522013 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.49□□□□□ -0.739e-8■□□□□ 9.6
CTNNA1-232ENST00000522013 NESP48681 1621 aa10.48□□□□□ -0.73
CTNNA1-232ENST00000522013 FKBP8Q14318 412 aa10.47□□□□□ -0.73
CTNNA1-232ENST00000522013 RTN4Q9NQC3 1192 aaKnown RBP10.47□□□□□ -0.73
CTNNA1-232ENST00000522013 ATF5Q9Y2D1 282 aaPredicted RBP10.46□□□□□ -0.73
CTNNA1-232ENST00000522013 SMARCA2P51531 1590 aa10.44□□□□□ -0.74
CTNNA1-232ENST00000522013 KIF21AQ7Z4S6 1674 aa10.42□□□□□ -0.74
CTNNA1-232ENST00000522013 U3KPZ7 1027 aaPredicted RBP10.4□□□□□ -0.74
CTNNA1-232ENST00000522013 BAZ1AQ9NRL2 1556 aaPredicted RBP10.38□□□□□ -0.75
CTNNA1-232ENST00000522013 NCAPD3P42695 1498 aa10.36□□□□□ -0.75
CTNNA1-232ENST00000522013 AMER1Q5JTC6 1135 aaPredicted RBP10.36□□□□□ -0.75
CTNNA1-232ENST00000522013 LAMC3Q9Y6N6 1575 aa10.31□□□□□ -0.76
CTNNA1-232ENST00000522013 HMGXB3Q12766 1538 aa10.31□□□□□ -0.76
CTNNA1-232ENST00000522013 ATAD2BQ9ULI0 1458 aa10.3□□□□□ -0.76
CTNNA1-232ENST00000522013 RIMBP3CA6NJZ7 1639 aa10.29□□□□□ -0.76
CTNNA1-232ENST00000522013 RIMBP3BA6NNM3 1639 aa10.29□□□□□ -0.76
CTNNA1-232ENST00000522013 RIMBP3Q9UFD9 1639 aa10.29□□□□□ -0.76
CTNNA1-232ENST00000522013 SAMD1Q6SPF0 538 aaPredicted RBP10.27□□□□□ -0.77
CTNNA1-232ENST00000522013 OSCARQ8IYS5 282 aa10.26□□□□□ -0.77
CTNNA1-232ENST00000522013 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.24□□□□□ -0.77
CTNNA1-232ENST00000522013 HNRNPUL2Q1KMD3 747 aaKnown RBP10.24□□□□□ -0.77
CTNNA1-232ENST00000522013 PDS5BQ9NTI5 1447 aa10.23□□□□□ -0.77
CTNNA1-232ENST00000522013 TRHP20396 242 aaPredicted RBP10.22□□□□□ -0.77
CTNNA1-232ENST00000522013 BAZ1BQ9UIG0 1483 aaKnown RBP10.22□□□□□ -0.77
CTNNA1-232ENST00000522013 SLC24A1O60721 1099 aa10.21□□□□□ -0.77
CTNNA1-232ENST00000522013 SPINK5Q9NQ38 1064 aaPredicted RBP10.21□□□□□ -0.77
CTNNA1-232ENST00000522013 SMARCA4P51532 1647 aa10.21□□□□□ -0.78
CTNNA1-232ENST00000522013 MRC2Q9UBG0 1479 aa10.2□□□□□ -0.78
CTNNA1-232ENST00000522013 WDR62O43379 1518 aa10.19□□□□□ -0.78
CTNNA1-232ENST00000522013 ARHGEF11O15085 1522 aa10.15□□□□□ -0.78
CTNNA1-232ENST00000522013 ZNF219Q9P2Y4 722 aaPredicted RBP10.14□□□□□ -0.79
CTNNA1-232ENST00000522013 DSG3P32926 999 aa10.1□□□□□ -0.79
CTNNA1-232ENST00000522013 CYB5RLQ6IPT4 315 aa10.09□□□□□ -0.79
CTNNA1-232ENST00000522013 CAPN15O75808 1086 aa10.08□□□□□ -0.8
CTNNA1-232ENST00000522013 CEP164Q9UPV0 1460 aa10.07□□□□□ -0.8
CTNNA1-232ENST00000522013 PEG3Q9GZU2 1588 aa10.05□□□□□ -0.8
CTNNA1-232ENST00000522013 CADPSQ9ULU8 1353 aa10.04□□□□□ -0.8
CTNNA1-232ENST00000522013 MKRN4PQ13434 485 aaPredicted RBP10.02□□□□□ -0.81
CTNNA1-232ENST00000522013 ARAP1Q96P48 1450 aa10□□□□□ -0.81
CTNNA1-232ENST00000522013 APLP2Q06481 763 aa9.99□□□□□ -0.81
CTNNA1-232ENST00000522013 CHD1O14646 1710 aa9.99□□□□□ -0.81
CTNNA1-232ENST00000522013 FANCD2Q9BXW9 1451 aa9.98□□□□□ -0.81
CTNNA1-232ENST00000522013 SPDYE4A6NLX3 237 aa9.95□□□□□ -0.82
CTNNA1-232ENST00000522013 ILDR1Q86SU0 546 aaPredicted RBP9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 7.2 ms