RNA–Protein interactions for RNA: ENST00000268459.5

NKD1-201, Transcript of naked cuticle homolog 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NKD1, Length 17,105 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKD1-201ENST00000268459 DCAF8L2P0C7V8 631 aa16.1■□□□□ 0.17
NKD1-201ENST00000268459 SUPT5HO00267 1087 aaKnown RBP15.6■□□□□ 0.09
NKD1-201ENST00000268459 NISCHQ9Y2I1 1504 aa15.48■□□□□ 0.07
NKD1-201ENST00000268459 SHROOM4Q9ULL8 1493 aa15.2■□□□□ 0.02
NKD1-201ENST00000268459 PELP1Q8IZL8 1130 aaKnown RBP14.97□□□□□ -0.01
NKD1-201ENST00000268459 PCGF6Q9BYE7 350 aa14.95□□□□□ -0.02
NKD1-201ENST00000268459 EHMT2Q96KQ7 1210 aa14.93□□□□□ -0.02
NKD1-201ENST00000268459 APLP2Q06481 763 aa14.76□□□□□ -0.05
NKD1-201ENST00000268459 ZEB1P37275 1124 aaPredicted RBP14.76□□□□□ -0.05
NKD1-201ENST00000268459 FAM9AQ8IZU1 332 aaPredicted RBP14.68□□□□□ -0.06
NKD1-201ENST00000268459 CENPBP07199 599 aaPredicted RBP14.58□□□□□ -0.07
NKD1-201ENST00000268459 TRIM41Q8WV44 630 aa14.49□□□□□ -0.09
NKD1-201ENST00000268459 TTBK1Q5TCY1 1321 aaPredicted RBP14.46□□□□□ -0.09
NKD1-201ENST00000268459 CCER1Q8TC90 406 aaPredicted RBP14.46□□□□□ -0.09
NKD1-201ENST00000268459 MYT1Q01538 1121 aa14.39□□□□□ -0.11
NKD1-201ENST00000268459 HRCP23327 699 aa14.38□□□□□ -0.11
NKD1-201ENST00000268459 TRIM26Q12899 539 aaPredicted RBP14.31□□□□□ -0.12
NKD1-201ENST00000268459 UBTFP17480 764 aaKnown RBP14.29□□□□□ -0.12
NKD1-201ENST00000268459 RANGAP1P46060 587 aaPredicted RBP14.26□□□□□ -0.13
NKD1-201ENST00000268459 ERICH6Q7L0X2 663 aa14.2□□□□□ -0.14
NKD1-201ENST00000268459 NEFLP07196 543 aa14.16□□□□□ -0.14
NKD1-201ENST00000268459 LOC105371045A0A1W2PR82 267 aa14.15□□□□□ -0.14
NKD1-201ENST00000268459 CHIC1Q5VXU3 224 aa14.15□□□□□ -0.14
NKD1-201ENST00000268459 YTHDC1Q96MU7 727 aaKnown RBP14.14□□□□□ -0.15
NKD1-201ENST00000268459 PPARGC1BQ86YN6 1023 aaKnown RBP14.14□□□□□ -0.15
NKD1-201ENST00000268459 ATP1B4Q9UN42 357 aaPredicted RBP14.07□□□□□ -0.16
NKD1-201ENST00000268459 HNRNPUL2Q1KMD3 747 aaKnown RBP13.82□□□□□ -0.2
NKD1-201ENST00000268459 DIEXFQ68CQ4 756 aaKnown RBP13.8□□□□□ -0.2
NKD1-201ENST00000268459 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.76□□□□□ -0.21
NKD1-201ENST00000268459 ITGAEP38570 1179 aa13.76□□□□□ -0.21
NKD1-201ENST00000268459 DAXXQ9UER7 740 aaPredicted RBP13.69□□□□□ -0.22
NKD1-201ENST00000268459 POLR3GLQ9BT43 218 aa13.59□□□□□ -0.23
NKD1-201ENST00000268459 GTF3C3Q9Y5Q9 886 aa13.57□□□□□ -0.24
NKD1-201ENST00000268459 ZNF316A6NFI3 1004 aaPredicted RBP13.51□□□□□ -0.25
NKD1-201ENST00000268459 ACIN1Q9UKV3 1341 aaKnown RBP13.49□□□□□ -0.25
NKD1-201ENST00000268459 RTL5Q5HYW3 569 aaPredicted RBP13.46□□□□□ -0.25
NKD1-201ENST00000268459 NEUROD1Q13562 356 aa13.45□□□□□ -0.26
NKD1-201ENST00000268459 FAM50AQ14320 339 aaKnown RBP13.43□□□□□ -0.26
NKD1-201ENST00000268459 CNGB1Q14028 1251 aaPredicted RBP13.42□□□□□ -0.26
NKD1-201ENST00000268459 ANP32CO43423 234 aa13.42□□□□□ -0.26
NKD1-201ENST00000268459 BCANQ96GW7 911 aa13.39□□□□□ -0.27
NKD1-201ENST00000268459 CDK11AQ9UQ88 783 aaPredicted RBP13.38□□□□□ -0.27
NKD1-201ENST00000268459 TRIM52Q96A61 297 aa13.34□□□□□ -0.27
NKD1-201ENST00000268459 CSRNP3Q8WYN3 585 aa13.32□□□□□ -0.28
NKD1-201ENST00000268459 MYT1LQ9UL68 1186 aa13.32□□□□□ -0.28
NKD1-201ENST00000268459 PABPN1Q86U42 306 aaKnown RBP eCLIP13.31□□□□□ -0.284e-7■■□□□ 11.8
NKD1-201ENST00000268459 CLSPNQ9HAW4 1339 aa13.3□□□□□ -0.28
NKD1-201ENST00000268459 SLC4A1APQ9BWU0 796 aaKnown RBP13.2□□□□□ -0.3
NKD1-201ENST00000268459 DCAF1Q9Y4B6 1507 aa13.19□□□□□ -0.3
NKD1-201ENST00000268459 ZNF326Q5BKZ1 582 aaKnown RBP13.13□□□□□ -0.31
NKD1-201ENST00000268459 SCAF1Q9H7N4 1312 aaKnown RBP13.11□□□□□ -0.31
NKD1-201ENST00000268459 ANP32AP39687 249 aaKnown RBP13.09□□□□□ -0.31
NKD1-201ENST00000268459 MIER1Q8N108 512 aa13.06□□□□□ -0.32
NKD1-201ENST00000268459 FKBP8Q14318 412 aa13.06□□□□□ -0.32
NKD1-201ENST00000268459 P3H3Q8IVL6 736 aa13.05□□□□□ -0.32
NKD1-201ENST00000268459 DDX10Q13206 875 aaKnown RBP13.04□□□□□ -0.32
NKD1-201ENST00000268459 ZBTB47Q9UFB7 747 aaPredicted RBP13□□□□□ -0.33
NKD1-201ENST00000268459 CANXP27824 592 aaKnown RBP12.98□□□□□ -0.33
NKD1-201ENST00000268459 ABCC9O60706 1549 aa12.97□□□□□ -0.33
NKD1-201ENST00000268459 HNRNPUQ00839 825 aaKnown RBP eCLIP12.95□□□□□ -0.344e-7■■□□□ 12.1
NKD1-201ENST00000268459 NPM2Q86SE8 214 aaKnown RBP12.92□□□□□ -0.34
NKD1-201ENST00000268459 ARID3CA6NKF2 412 aa12.91□□□□□ -0.34
NKD1-201ENST00000268459 TONSLQ96HA7 1378 aa12.9□□□□□ -0.34
NKD1-201ENST00000268459 FBLN2P98095 1184 aa12.87□□□□□ -0.35
NKD1-201ENST00000268459 CCDC136Q96JN2 1154 aa12.87□□□□□ -0.35
NKD1-201ENST00000268459 FAM9BQ8IZU0 186 aa12.87□□□□□ -0.35
NKD1-201ENST00000268459 NEFMP07197 916 aa12.85□□□□□ -0.35
NKD1-201ENST00000268459 ZNF777Q9ULD5 760 aaPredicted RBP12.85□□□□□ -0.35
NKD1-201ENST00000268459 TMC1Q8TDI8 760 aa12.83□□□□□ -0.36
NKD1-201ENST00000268459 MRS2Q9HD23 443 aa12.81□□□□□ -0.36
NKD1-201ENST00000268459 NBR1Q14596 966 aa12.79□□□□□ -0.36
NKD1-201ENST00000268459 BCL11AQ9H165 835 aa12.79□□□□□ -0.36
NKD1-201ENST00000268459 ANP32BQ92688 251 aaKnown RBP12.78□□□□□ -0.36
NKD1-201ENST00000268459 ZCCHC6Q5VYS8 1495 aaKnown RBP12.77□□□□□ -0.37
NKD1-201ENST00000268459 EIF5BO60841 1220 aaKnown RBP12.77□□□□□ -0.37
NKD1-201ENST00000268459 CHIC2Q9UKJ5 165 aa12.76□□□□□ -0.37
NKD1-201ENST00000268459 UPF2Q9HAU5 1272 aaKnown RBP12.76□□□□□ -0.37
NKD1-201ENST00000268459 MYO15BQ96JP2 1530 aa12.76□□□□□ -0.37
NKD1-201ENST00000268459 HSP90AA1P07900 732 aaKnown RBP12.74□□□□□ -0.37
NKD1-201ENST00000268459 CLIP1P30622 1438 aa12.74□□□□□ -0.37
NKD1-201ENST00000268459 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.73□□□□□ -0.37
NKD1-201ENST00000268459 IRX6P78412 446 aaPredicted RBP12.73□□□□□ -0.37
NKD1-201ENST00000268459 HIRIP3Q9BW71 556 aaPredicted RBP12.73□□□□□ -0.37
NKD1-201ENST00000268459 SALL2Q9Y467 1007 aaPredicted RBP12.72□□□□□ -0.37
NKD1-201ENST00000268459 EIF4G2P78344 907 aaKnown RBP eCLIP12.71□□□□□ -0.38
NKD1-201ENST00000268459 ANP32EQ9BTT0 268 aa12.7□□□□□ -0.38
NKD1-201ENST00000268459 KDM2AQ9Y2K7 1162 aa12.69□□□□□ -0.38
NKD1-201ENST00000268459 SCRIBQ14160 1630 aa12.68□□□□□ -0.38
NKD1-201ENST00000268459 SLC24A1O60721 1099 aa12.67□□□□□ -0.38
NKD1-201ENST00000268459 RRP7BPQ9NSQ0 103 aa12.66□□□□□ -0.38
NKD1-201ENST00000268459 RSF1Q96T23 1441 aaPredicted RBP12.65□□□□□ -0.38
NKD1-201ENST00000268459 DDRGK1Q96HY6 314 aa12.65□□□□□ -0.38
NKD1-201ENST00000268459 SUPT16HQ9Y5B9 1047 aaKnown RBP12.65□□□□□ -0.38
NKD1-201ENST00000268459 TSPY4P0CV99 314 aa12.65□□□□□ -0.39
NKD1-201ENST00000268459 TSPY10P0CW01 314 aa12.65□□□□□ -0.39
NKD1-201ENST00000268459 TNIKQ9UKE5 1360 aa12.64□□□□□ -0.39
NKD1-201ENST00000268459 WDR43Q15061 677 aaKnown RBP eCLIP12.64□□□□□ -0.39
NKD1-201ENST00000268459 EEA1Q15075 1411 aa12.64□□□□□ -0.39
NKD1-201ENST00000268459 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.63□□□□□ -0.395e-12■■□□□ 12.7
NKD1-201ENST00000268459 PPP4R2Q9NY27 417 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms