RNA–Protein interactions for RNA: ENST00000606065.3

CDC34-205, Transcript of cell division cycle 34, humanhuman

TSL 5

Gene CDC34, Length 1,062 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC34-205ENST00000606065 NISCHQ9Y2I1 1504 aa55.37■■■■■ 6.45
CDC34-205ENST00000606065 CCDC180Q9P1Z9 1646 aa49.45■■■■■ 5.51
CDC34-205ENST00000606065 ABCC9O60706 1549 aa48.69■■■■■ 5.39
CDC34-205ENST00000606065 RB1CC1Q8TDY2 1594 aa46.71■■■■■ 5.07
CDC34-205ENST00000606065 NACADO15069 1562 aa46.59■■■■■ 5.05
CDC34-205ENST00000606065 MYO15BQ96JP2 1530 aa46.25■■■■■ 4.99
CDC34-205ENST00000606065 DCAF8L2P0C7V8 631 aa46.21■■■■■ 4.99
CDC34-205ENST00000606065 ZCCHC6Q5VYS8 1495 aaKnown RBP46.05■■■■■ 4.96
CDC34-205ENST00000606065 DCAF1Q9Y4B6 1507 aa45.87■■■■■ 4.93
CDC34-205ENST00000606065 UNC13AQ9UPW8 1703 aa45.66■■■■■ 4.9
CDC34-205ENST00000606065 PABPN1Q86U42 306 aaKnown RBP eCLIP45.39■■■■■ 4.86
CDC34-205ENST00000606065 BICRAQ9NZM4 1560 aa45.37■■■■■ 4.85
CDC34-205ENST00000606065 DNAJC5BQ9UF47 199 aa45.15■■■■■ 4.82
CDC34-205ENST00000606065 SCRIBQ14160 1630 aa44.97■■■■■ 4.79
CDC34-205ENST00000606065 SHROOM4Q9ULL8 1493 aa44.91■■■■■ 4.78
CDC34-205ENST00000606065 EIF4G1Q04637 1599 aaKnown RBP44.17■■■■■ 4.66
CDC34-205ENST00000606065 CC2D2AQ9P2K1 1620 aa44.07■■■■■ 4.65
CDC34-205ENST00000606065 CECR2Q9BXF3 1484 aa43.83■■■■■ 4.61
CDC34-205ENST00000606065 SMARCA4P51532 1647 aa43.04■■■■■ 4.48
CDC34-205ENST00000606065 NCAPD3P42695 1498 aa43.02■■■■■ 4.48
CDC34-205ENST00000606065 BAZ1AQ9NRL2 1556 aaPredicted RBP42.94■■■■■ 4.46
CDC34-205ENST00000606065 ATAD2BQ9ULI0 1458 aa42.94■■■■■ 4.46
CDC34-205ENST00000606065 SMARCA2P51531 1590 aa42.86■■■■■ 4.45
CDC34-205ENST00000606065 HMGXB3Q12766 1538 aa42.76■■■■■ 4.44
CDC34-205ENST00000606065 PEG3Q9GZU2 1588 aa42.71■■■■■ 4.43
CDC34-205ENST00000606065 MROH2BQ7Z745 1585 aa42.65■■■■■ 4.42
CDC34-205ENST00000606065 BAZ1BQ9UIG0 1483 aaKnown RBP42.5■■■■■ 4.39
CDC34-205ENST00000606065 WIZO95785 1651 aa42.13■■■■■ 4.34
CDC34-205ENST00000606065 NESP48681 1621 aa42.03■■■■■ 4.32
CDC34-205ENST00000606065 RSF1Q96T23 1441 aaPredicted RBP42.01■■■■■ 4.32
CDC34-205ENST00000606065 ERCC6Q03468 1493 aa41.98■■■■■ 4.31
CDC34-205ENST00000606065 LAMC3Q9Y6N6 1575 aa41.92■■■■■ 4.3
CDC34-205ENST00000606065 CUX2O14529 1486 aa41.8■■■■■ 4.28
CDC34-205ENST00000606065 TOP2AP11388 1531 aaKnown RBP41.7■■■■■ 4.27
CDC34-205ENST00000606065 CADPSQ9ULU8 1353 aa41.69■■■■■ 4.26
CDC34-205ENST00000606065 PDS5BQ9NTI5 1447 aa41.61■■■■■ 4.25
CDC34-205ENST00000606065 THOC2Q8NI27 1593 aaKnown RBP41.55■■■■■ 4.24
CDC34-205ENST00000606065 KIF21AQ7Z4S6 1674 aa41.52■■■■■ 4.24
CDC34-205ENST00000606065 CFTRP13569 1480 aa41.39■■■■■ 4.22
CDC34-205ENST00000606065 MRC2Q9UBG0 1479 aa41.22■■■■■ 4.19
CDC34-205ENST00000606065 CCDC88BA6NC98 1476 aa41.19■■■■■ 4.18
CDC34-205ENST00000606065 FANCD2Q9BXW9 1451 aa41.19■■■■■ 4.18
CDC34-205ENST00000606065 CEP164Q9UPV0 1460 aa41.17■■■■■ 4.18
CDC34-205ENST00000606065 WDR62O43379 1518 aa41.14■■■■■ 4.18
CDC34-205ENST00000606065 DNAJC5Q9H3Z4 198 aa41.02■■■■■ 4.16
CDC34-205ENST00000606065 PRDM2Q13029 1718 aa41■■■■■ 4.15
CDC34-205ENST00000606065 URB2Q14146 1524 aaKnown RBP40.83■■■■■ 4.13
CDC34-205ENST00000606065 TOPBP1Q92547 1522 aa40.5■■■■■ 4.07
CDC34-205ENST00000606065 ABCC8Q09428 1581 aa40.48■■■■■ 4.07
CDC34-205ENST00000606065 SUPT5HO00267 1087 aaKnown RBP40.43■■■■■ 4.06
CDC34-205ENST00000606065 DNMBPQ6XZF7 1577 aa40.42■■■■■ 4.06
CDC34-205ENST00000606065 IFT140Q96RY7 1462 aa40.35■■■■■ 4.05
CDC34-205ENST00000606065 ZNF608Q9ULD9 1512 aaPredicted RBP40.19■■■■■ 4.02
CDC34-205ENST00000606065 POLA1P09884 1462 aaPredicted RBP40.13■■■■■ 4.02
CDC34-205ENST00000606065 TARBP1Q13395 1621 aaKnown RBP40.13■■■■■ 4.02
CDC34-205ENST00000606065 CUX1P39880 1505 aa40.03■■■■■ 4
CDC34-205ENST00000606065 EIF4G3O43432 1585 aaKnown RBP40.02■■■■■ 4
CDC34-205ENST00000606065 FGD5Q6ZNL6 1462 aa39.94■■■■□ 3.98
CDC34-205ENST00000606065 SOGA1O94964 1423 aa39.92■■■■□ 3.98
CDC34-205ENST00000606065 RAD54L2Q9Y4B4 1467 aa39.92■■■■□ 3.98
CDC34-205ENST00000606065 OSCARQ8IYS5 282 aa39.91■■■■□ 3.98
CDC34-205ENST00000606065 AQRO60306 1485 aaKnown RBP eCLIP39.89■■■■□ 3.984e-7■■■■■ 34.9
CDC34-205ENST00000606065 WDR97A6NE52 1622 aa39.81■■■■□ 3.96
CDC34-205ENST00000606065 TDRD9Q8NDG6 1382 aaKnown RBP39.73■■■■□ 3.95
CDC34-205ENST00000606065 BIVM-ERCC5R4GMW8 1640 aa39.59■■■■□ 3.93
CDC34-205ENST00000606065 TOP2BQ02880 1626 aa39.58■■■■□ 3.93
CDC34-205ENST00000606065 WRNQ14191 1432 aaPredicted RBP eCLIP39.58■■■■□ 3.93
CDC34-205ENST00000606065 ABCA10Q8WWZ4 1543 aa39.58■■■■□ 3.93
CDC34-205ENST00000606065 CHD1O14646 1710 aa39.57■■■■□ 3.93
CDC34-205ENST00000606065 GRIN2BQ13224 1484 aa39.53■■■■□ 3.92
CDC34-205ENST00000606065 SYNJ1O43426 1573 aa39.53■■■■□ 3.92
CDC34-205ENST00000606065 SNAPC4Q5SXM2 1469 aa39.51■■■■□ 3.92
CDC34-205ENST00000606065 MAGI1Q96QZ7 1491 aaPredicted RBP39.49■■■■□ 3.91
CDC34-205ENST00000606065 ABCA5Q8WWZ7 1642 aa39.47■■■■□ 3.91
CDC34-205ENST00000606065 GAPVD1Q14C86 1478 aa39.46■■■■□ 3.91
CDC34-205ENST00000606065 PBRM1Q86U86 1689 aa39.4■■■■□ 3.9
CDC34-205ENST00000606065 FBLN2P98095 1184 aa39.38■■■■□ 3.89
CDC34-205ENST00000606065 RIMBP3CA6NJZ7 1639 aa39.36■■■■□ 3.89
CDC34-205ENST00000606065 RIMBP3BA6NNM3 1639 aa39.36■■■■□ 3.89
CDC34-205ENST00000606065 RIMBP3Q9UFD9 1639 aa39.36■■■■□ 3.89
CDC34-205ENST00000606065 SYNJ2O15056 1496 aa39.34■■■■□ 3.89
CDC34-205ENST00000606065 ARHGEF11O15085 1522 aa39.32■■■■□ 3.89
CDC34-205ENST00000606065 TRIM41Q8WV44 630 aa39.31■■■■□ 3.88
CDC34-205ENST00000606065 CHMP7Q8WUX9 453 aaPredicted RBP39.27■■■■□ 3.88
CDC34-205ENST00000606065 CLASP1Q7Z460 1538 aa39.22■■■■□ 3.87
CDC34-205ENST00000606065 ADAMTS12P58397 1594 aa39.1■■■■□ 3.85
CDC34-205ENST00000606065 ERICH3Q5RHP9 1530 aa39.09■■■■□ 3.85
CDC34-205ENST00000606065 GRIN2AQ12879 1464 aa39.04■■■■□ 3.84
CDC34-205ENST00000606065 FHAD1B1AJZ9 1412 aa39.01■■■■□ 3.84
CDC34-205ENST00000606065 ARAP1Q96P48 1450 aa38.98■■■■□ 3.83
CDC34-205ENST00000606065 NUP160Q12769 1436 aa38.91■■■■□ 3.82
CDC34-205ENST00000606065 CYB5RLQ6IPT4 315 aa38.89■■■■□ 3.82
CDC34-205ENST00000606065 CEP170Q5SW79 1584 aa38.86■■■■□ 3.81
CDC34-205ENST00000606065 KIF27Q86VH2 1401 aa38.79■■■■□ 3.8
CDC34-205ENST00000606065 IGF1RP08069 1367 aa38.72■■■■□ 3.79
CDC34-205ENST00000606065 SHROOM2Q13796 1616 aa38.68■■■■□ 3.78
CDC34-205ENST00000606065 CUL7Q14999 1698 aa38.63■■■■□ 3.77
CDC34-205ENST00000606065 ERCC6L2Q5T890 1561 aa38.59■■■■□ 3.77
CDC34-205ENST00000606065 RUSC2Q8N2Y8 1516 aa38.54■■■■□ 3.76
CDC34-205ENST00000606065 CARMIL1Q5VZK9 1371 aa38.44■■■■□ 3.74
Retrieved 100 of 20,778 RNA–protein pairs in 6.8 ms