RNA–Protein interactions for RNA: ENST00000561784.5

DEF8-204, Transcript of differentially expressed in FDCP 8 homolog, humanhuman

TSL 4

Gene DEF8, Length 612 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEF8-204ENST00000561784 NISCHQ9Y2I1 1504 aa43.07■■■■■ 4.48
DEF8-204ENST00000561784 CCDC180Q9P1Z9 1646 aa38.16■■■■□ 3.7
DEF8-204ENST00000561784 ABCC9O60706 1549 aa37.12■■■■□ 3.53
DEF8-204ENST00000561784 ZCCHC6Q5VYS8 1495 aaKnown RBP35.97■■■■□ 3.35
DEF8-204ENST00000561784 DCAF8L2P0C7V8 631 aa35.94■■■■□ 3.34
DEF8-204ENST00000561784 NACADO15069 1562 aa35.77■■■■□ 3.32
DEF8-204ENST00000561784 RB1CC1Q8TDY2 1594 aa35.77■■■■□ 3.32
DEF8-204ENST00000561784 MYO15BQ96JP2 1530 aa35.59■■■■□ 3.29
DEF8-204ENST00000561784 DCAF1Q9Y4B6 1507 aa35.58■■■■□ 3.29
DEF8-204ENST00000561784 UNC13AQ9UPW8 1703 aa35■■■■□ 3.19
DEF8-204ENST00000561784 SCRIBQ14160 1630 aa34.95■■■■□ 3.19
DEF8-204ENST00000561784 PABPN1Q86U42 306 aaKnown RBP eCLIP34.73■■■■□ 3.15
DEF8-204ENST00000561784 BICRAQ9NZM4 1560 aa34.69■■■■□ 3.14
DEF8-204ENST00000561784 SHROOM4Q9ULL8 1493 aa34.34■■■■□ 3.09
DEF8-204ENST00000561784 DNAJC5BQ9UF47 199 aa34.07■■■■□ 3.04
DEF8-204ENST00000561784 EIF4G1Q04637 1599 aaKnown RBP33.77■■■■□ 3
DEF8-204ENST00000561784 CECR2Q9BXF3 1484 aa33.56■■■□□ 2.96
DEF8-204ENST00000561784 CC2D2AQ9P2K1 1620 aa33.56■■■□□ 2.96
DEF8-204ENST00000561784 SMARCA4P51532 1647 aa33.39■■■□□ 2.94
DEF8-204ENST00000561784 BAZ1AQ9NRL2 1556 aaPredicted RBP33.37■■■□□ 2.93
DEF8-204ENST00000561784 MROH2BQ7Z745 1585 aa33.24■■■□□ 2.91
DEF8-204ENST00000561784 ATAD2BQ9ULI0 1458 aa33.1■■■□□ 2.89
DEF8-204ENST00000561784 SMARCA2P51531 1590 aa33.07■■■□□ 2.88
DEF8-204ENST00000561784 PEG3Q9GZU2 1588 aa32.99■■■□□ 2.87
DEF8-204ENST00000561784 NCAPD3P42695 1498 aa32.99■■■□□ 2.87
DEF8-204ENST00000561784 RSF1Q96T23 1441 aaPredicted RBP32.94■■■□□ 2.86
DEF8-204ENST00000561784 WIZO95785 1651 aa32.92■■■□□ 2.86
DEF8-204ENST00000561784 HMGXB3Q12766 1538 aa32.9■■■□□ 2.86
DEF8-204ENST00000561784 BAZ1BQ9UIG0 1483 aaKnown RBP32.88■■■□□ 2.85
DEF8-204ENST00000561784 TOP2AP11388 1531 aaKnown RBP32.56■■■□□ 2.8
DEF8-204ENST00000561784 SUPT5HO00267 1087 aaKnown RBP32.41■■■□□ 2.78
DEF8-204ENST00000561784 NESP48681 1621 aa32.22■■■□□ 2.75
DEF8-204ENST00000561784 CCDC88BA6NC98 1476 aa32.16■■■□□ 2.74
DEF8-204ENST00000561784 LAMC3Q9Y6N6 1575 aa32.11■■■□□ 2.73
DEF8-204ENST00000561784 CADPSQ9ULU8 1353 aa32.07■■■□□ 2.72
DEF8-204ENST00000561784 ERCC6Q03468 1493 aa31.97■■■□□ 2.71
DEF8-204ENST00000561784 CFTRP13569 1480 aa31.94■■■□□ 2.7
DEF8-204ENST00000561784 PDS5BQ9NTI5 1447 aa31.87■■■□□ 2.69
DEF8-204ENST00000561784 KIF21AQ7Z4S6 1674 aa31.84■■■□□ 2.69
DEF8-204ENST00000561784 DNAJC5Q9H3Z4 198 aa31.83■■■□□ 2.69
DEF8-204ENST00000561784 PRDM2Q13029 1718 aa31.77■■■□□ 2.68
DEF8-204ENST00000561784 FANCD2Q9BXW9 1451 aa31.75■■■□□ 2.67
DEF8-204ENST00000561784 CEP164Q9UPV0 1460 aa31.69■■■□□ 2.66
DEF8-204ENST00000561784 THOC2Q8NI27 1593 aaKnown RBP31.64■■■□□ 2.66
DEF8-204ENST00000561784 MRC2Q9UBG0 1479 aa31.58■■■□□ 2.65
DEF8-204ENST00000561784 WDR62O43379 1518 aa31.44■■■□□ 2.62
DEF8-204ENST00000561784 CUX2O14529 1486 aa31.44■■■□□ 2.62
DEF8-204ENST00000561784 URB2Q14146 1524 aaKnown RBP31.42■■■□□ 2.62
DEF8-204ENST00000561784 TOPBP1Q92547 1522 aa31.27■■■□□ 2.6
DEF8-204ENST00000561784 DNMBPQ6XZF7 1577 aa31.26■■■□□ 2.6
DEF8-204ENST00000561784 ABCC8Q09428 1581 aa31.21■■■□□ 2.59
DEF8-204ENST00000561784 CUX1P39880 1505 aa31.17■■■□□ 2.58
DEF8-204ENST00000561784 WRNQ14191 1432 aaPredicted RBP eCLIP31.07■■■□□ 2.56
DEF8-204ENST00000561784 POLA1P09884 1462 aaPredicted RBP31.03■■■□□ 2.56
DEF8-204ENST00000561784 FGD5Q6ZNL6 1462 aa31.02■■■□□ 2.56
DEF8-204ENST00000561784 SYNJ1O43426 1573 aa31.02■■■□□ 2.56
DEF8-204ENST00000561784 IFT140Q96RY7 1462 aa30.98■■■□□ 2.55
DEF8-204ENST00000561784 TOP2BQ02880 1626 aa30.96■■■□□ 2.55
DEF8-204ENST00000561784 BIVM-ERCC5R4GMW8 1640 aa30.96■■■□□ 2.55
DEF8-204ENST00000561784 RAD54L2Q9Y4B4 1467 aa30.92■■■□□ 2.54
DEF8-204ENST00000561784 TARBP1Q13395 1621 aaKnown RBP30.9■■■□□ 2.54
DEF8-204ENST00000561784 SOGA1O94964 1423 aa30.89■■■□□ 2.53
DEF8-204ENST00000561784 ZNF608Q9ULD9 1512 aaPredicted RBP30.86■■■□□ 2.53
DEF8-204ENST00000561784 EIF4G3O43432 1585 aaKnown RBP30.77■■■□□ 2.52
DEF8-204ENST00000561784 WDR97A6NE52 1622 aa30.75■■■□□ 2.51
DEF8-204ENST00000561784 AQRO60306 1485 aaKnown RBP eCLIP30.71■■■□□ 2.512e-8■■■■■ 47.5
DEF8-204ENST00000561784 TDRD9Q8NDG6 1382 aaKnown RBP30.7■■■□□ 2.51
DEF8-204ENST00000561784 ABCA10Q8WWZ4 1543 aa30.68■■■□□ 2.5
DEF8-204ENST00000561784 ABCA5Q8WWZ7 1642 aa30.57■■■□□ 2.48
DEF8-204ENST00000561784 GAPVD1Q14C86 1478 aa30.55■■■□□ 2.48
DEF8-204ENST00000561784 TRIM41Q8WV44 630 aa30.54■■■□□ 2.48
DEF8-204ENST00000561784 PBRM1Q86U86 1689 aa30.52■■■□□ 2.48
DEF8-204ENST00000561784 GRIN2BQ13224 1484 aa30.5■■■□□ 2.47
DEF8-204ENST00000561784 SNAPC4Q5SXM2 1469 aa30.47■■■□□ 2.47
DEF8-204ENST00000561784 KIF27Q86VH2 1401 aa30.38■■■□□ 2.45
DEF8-204ENST00000561784 MAGI1Q96QZ7 1491 aaPredicted RBP30.37■■■□□ 2.45
DEF8-204ENST00000561784 CHIC1Q5VXU3 224 aa30.36■■■□□ 2.45
DEF8-204ENST00000561784 CHD1O14646 1710 aa30.33■■■□□ 2.45
DEF8-204ENST00000561784 ERICH3Q5RHP9 1530 aa30.32■■■□□ 2.44
DEF8-204ENST00000561784 FBLN2P98095 1184 aa30.31■■■□□ 2.44
DEF8-204ENST00000561784 ADAMTS12P58397 1594 aa30.29■■■□□ 2.44
DEF8-204ENST00000561784 SYNJ2O15056 1496 aa30.26■■■□□ 2.44
DEF8-204ENST00000561784 RUSC2Q8N2Y8 1516 aa30.25■■■□□ 2.43
DEF8-204ENST00000561784 CHMP7Q8WUX9 453 aaPredicted RBP30.22■■■□□ 2.43
DEF8-204ENST00000561784 FHAD1B1AJZ9 1412 aa30.19■■■□□ 2.42
DEF8-204ENST00000561784 IGF1RP08069 1367 aa30.18■■■□□ 2.42
DEF8-204ENST00000561784 OSCARQ8IYS5 282 aa30.18■■■□□ 2.42
DEF8-204ENST00000561784 CUL7Q14999 1698 aa30.14■■■□□ 2.42
DEF8-204ENST00000561784 GRIN2AQ12879 1464 aa30.12■■■□□ 2.41
DEF8-204ENST00000561784 CARMIL1Q5VZK9 1371 aa30.04■■■□□ 2.4
DEF8-204ENST00000561784 FAM9AQ8IZU1 332 aaPredicted RBP29.99■■■□□ 2.39
DEF8-204ENST00000561784 CEP170Q5SW79 1584 aa29.98■■■□□ 2.39
DEF8-204ENST00000561784 EEA1Q15075 1411 aa29.96■■■□□ 2.39
DEF8-204ENST00000561784 CLASP1Q7Z460 1538 aa29.96■■■□□ 2.39
DEF8-204ENST00000561784 NUP160Q12769 1436 aa29.95■■■□□ 2.38
DEF8-204ENST00000561784 RAPGEF2Q9Y4G8 1499 aa29.91■■■□□ 2.38
DEF8-204ENST00000561784 CSRNP3Q8WYN3 585 aa29.89■■■□□ 2.38
DEF8-204ENST00000561784 PRXQ9BXM0 1461 aa29.86■■■□□ 2.37
DEF8-204ENST00000561784 ARHGEF11O15085 1522 aa29.76■■■□□ 2.35
DEF8-204ENST00000561784 RIMBP3CA6NJZ7 1639 aa29.74■■■□□ 2.35
Retrieved 100 of 20,778 RNA–protein pairs in 123.3 ms