RNA–Protein interactions for RNA: ENST00000563594.5

DEF8-210, Transcript of differentially expressed in FDCP 8 homolog, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene DEF8, Length 4,450 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEF8-210ENST00000563594 NISCHQ9Y2I1 1504 aa28.87■■■□□ 2.21
DEF8-210ENST00000563594 DCAF8L2P0C7V8 631 aa27.07■■□□□ 1.92
DEF8-210ENST00000563594 SHROOM4Q9ULL8 1493 aa26.14■■□□□ 1.78
DEF8-210ENST00000563594 SUPT5HO00267 1087 aaKnown RBP26.02■■□□□ 1.76
DEF8-210ENST00000563594 EHMT2Q96KQ7 1210 aa24.54■■□□□ 1.52
DEF8-210ENST00000563594 FAM9AQ8IZU1 332 aaPredicted RBP24.32■■□□□ 1.48
DEF8-210ENST00000563594 ABCC9O60706 1549 aa24.19■■□□□ 1.46
DEF8-210ENST00000563594 TRIM41Q8WV44 630 aa24.17■■□□□ 1.46
DEF8-210ENST00000563594 ZCCHC6Q5VYS8 1495 aaKnown RBP24.08■■□□□ 1.45
DEF8-210ENST00000563594 CCDC180Q9P1Z9 1646 aa24.08■■□□□ 1.45
DEF8-210ENST00000563594 CHIC1Q5VXU3 224 aa23.99■■□□□ 1.43
DEF8-210ENST00000563594 PCGF6Q9BYE7 350 aa23.92■■□□□ 1.42
DEF8-210ENST00000563594 TTBK1Q5TCY1 1321 aaPredicted RBP23.64■■□□□ 1.37
DEF8-210ENST00000563594 LOC105371045A0A1W2PR82 267 aa23.63■■□□□ 1.37
DEF8-210ENST00000563594 APLP2Q06481 763 aa23.63■■□□□ 1.37
DEF8-210ENST00000563594 PABPN1Q86U42 306 aaKnown RBP eCLIP23.61■■□□□ 1.37
DEF8-210ENST00000563594 UBTFP17480 764 aaKnown RBP23.53■■□□□ 1.36
DEF8-210ENST00000563594 RANGAP1P46060 587 aaPredicted RBP23.52■■□□□ 1.36
DEF8-210ENST00000563594 SCRIBQ14160 1630 aa23.49■■□□□ 1.35
DEF8-210ENST00000563594 PPARGC1BQ86YN6 1023 aaKnown RBP23.3■■□□□ 1.32
DEF8-210ENST00000563594 TRIM26Q12899 539 aaPredicted RBP23.22■■□□□ 1.31
DEF8-210ENST00000563594 DCAF1Q9Y4B6 1507 aa23.14■■□□□ 1.3
DEF8-210ENST00000563594 CCER1Q8TC90 406 aaPredicted RBP23.11■■□□□ 1.29
DEF8-210ENST00000563594 ZEB1P37275 1124 aaPredicted RBP23.11■■□□□ 1.29
DEF8-210ENST00000563594 ATP1B4Q9UN42 357 aaPredicted RBP23.04■■□□□ 1.28
DEF8-210ENST00000563594 NACADO15069 1562 aa23■■□□□ 1.27
DEF8-210ENST00000563594 HRCP23327 699 aa22.99■■□□□ 1.27
DEF8-210ENST00000563594 RB1CC1Q8TDY2 1594 aa22.98■■□□□ 1.27
DEF8-210ENST00000563594 RSF1Q96T23 1441 aaPredicted RBP22.95■■□□□ 1.26
DEF8-210ENST00000563594 MYO15BQ96JP2 1530 aa22.69■■□□□ 1.22
DEF8-210ENST00000563594 CECR2Q9BXF3 1484 aa22.67■■□□□ 1.22
DEF8-210ENST00000563594 CSRNP3Q8WYN3 585 aa22.66■■□□□ 1.22
DEF8-210ENST00000563594 HNRNPUL2Q1KMD3 747 aaKnown RBP22.63■■□□□ 1.21
DEF8-210ENST00000563594 ITGAEP38570 1179 aa22.55■■□□□ 1.2
DEF8-210ENST00000563594 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.53■■□□□ 1.2
DEF8-210ENST00000563594 BAZ1AQ9NRL2 1556 aaPredicted RBP22.47■■□□□ 1.19
DEF8-210ENST00000563594 MROH2BQ7Z745 1585 aa22.42■■□□□ 1.18
DEF8-210ENST00000563594 CENPBP07199 599 aaPredicted RBP22.32■■□□□ 1.16
DEF8-210ENST00000563594 BAZ1BQ9UIG0 1483 aaKnown RBP22.27■■□□□ 1.16
DEF8-210ENST00000563594 WRNQ14191 1432 aaPredicted RBP eCLIP22.18■■□□□ 1.14
DEF8-210ENST00000563594 FAM50AQ14320 339 aaKnown RBP22.16■■□□□ 1.14
DEF8-210ENST00000563594 YTHDC1Q96MU7 727 aaKnown RBP22.16■■□□□ 1.14
DEF8-210ENST00000563594 P3H3Q8IVL6 736 aa22.16■■□□□ 1.14
DEF8-210ENST00000563594 WIZO95785 1651 aa22.13■■□□□ 1.13
DEF8-210ENST00000563594 PELP1Q8IZL8 1130 aaKnown RBP22.1■■□□□ 1.13
DEF8-210ENST00000563594 CCDC88BA6NC98 1476 aa22.09■■□□□ 1.13
DEF8-210ENST00000563594 EEA1Q15075 1411 aa22.08■■□□□ 1.12
DEF8-210ENST00000563594 CEP162Q5TB80 1403 aa21.98■■□□□ 1.11
DEF8-210ENST00000563594 FBLN2P98095 1184 aa21.98■■□□□ 1.11
DEF8-210ENST00000563594 DIEXFQ68CQ4 756 aaKnown RBP21.97■■□□□ 1.11
DEF8-210ENST00000563594 GOLGA3Q08378 1498 aa21.96■■□□□ 1.11
DEF8-210ENST00000563594 CLIP1P30622 1438 aa21.96■■□□□ 1.11
DEF8-210ENST00000563594 TOP2AP11388 1531 aaKnown RBP21.95■■□□□ 1.1
DEF8-210ENST00000563594 ABCC8Q09428 1581 aa21.93■■□□□ 1.1
DEF8-210ENST00000563594 SOGA1O94964 1423 aa21.93■■□□□ 1.1
DEF8-210ENST00000563594 TNIKQ9UKE5 1360 aa21.9■■□□□ 1.1
DEF8-210ENST00000563594 SMARCA4P51532 1647 aa21.89■■□□□ 1.09
DEF8-210ENST00000563594 SMARCA2P51531 1590 aa21.87■■□□□ 1.09
DEF8-210ENST00000563594 ARID3CA6NKF2 412 aa21.85■■□□□ 1.09
DEF8-210ENST00000563594 CEP164Q9UPV0 1460 aa21.83■■□□□ 1.08
DEF8-210ENST00000563594 NEUROD1Q13562 356 aa21.83■■□□□ 1.08
DEF8-210ENST00000563594 KIF27Q86VH2 1401 aa21.8■■□□□ 1.08
DEF8-210ENST00000563594 TRIM52Q96A61 297 aa21.78■■□□□ 1.08
DEF8-210ENST00000563594 ATAD2BQ9ULI0 1458 aa21.78■■□□□ 1.08
DEF8-210ENST00000563594 MYT1LQ9UL68 1186 aa21.75■■□□□ 1.07
DEF8-210ENST00000563594 ZNF316A6NFI3 1004 aaPredicted RBP21.72■■□□□ 1.07
DEF8-210ENST00000563594 POLR3GLQ9BT43 218 aa21.66■■□□□ 1.06
DEF8-210ENST00000563594 NEFLP07196 543 aa21.6■■□□□ 1.05
DEF8-210ENST00000563594 CUX2O14529 1486 aa21.57■■□□□ 1.04
DEF8-210ENST00000563594 CDK11AQ9UQ88 783 aaPredicted RBP21.56■■□□□ 1.04
DEF8-210ENST00000563594 CNGB1Q14028 1251 aaPredicted RBP21.52■■□□□ 1.04
DEF8-210ENST00000563594 ZNF777Q9ULD5 760 aaPredicted RBP21.51■■□□□ 1.03
DEF8-210ENST00000563594 MTUS2Q5JR59 1369 aa21.51■■□□□ 1.03
DEF8-210ENST00000563594 CARMIL1Q5VZK9 1371 aa21.5■■□□□ 1.03
DEF8-210ENST00000563594 RUSC2Q8N2Y8 1516 aa21.5■■□□□ 1.03
DEF8-210ENST00000563594 CHMP7Q8WUX9 453 aaPredicted RBP21.47■■□□□ 1.03
DEF8-210ENST00000563594 CADPSQ9ULU8 1353 aa21.47■■□□□ 1.03
DEF8-210ENST00000563594 VPS8Q8N3P4 1428 aa21.41■■□□□ 1.02
DEF8-210ENST00000563594 CHIC2Q9UKJ5 165 aa21.41■■□□□ 1.02
DEF8-210ENST00000563594 ZNF326Q5BKZ1 582 aaKnown RBP21.4■■□□□ 1.02
DEF8-210ENST00000563594 ERICH6Q7L0X2 663 aa21.36■■□□□ 1.01
DEF8-210ENST00000563594 RAPGEF2Q9Y4G8 1499 aa21.35■■□□□ 1.01
DEF8-210ENST00000563594 NCAPD3P42695 1498 aa21.32■■□□□ 1
DEF8-210ENST00000563594 EIF4G1Q04637 1599 aaKnown RBP21.3■■□□□ 1
DEF8-210ENST00000563594 TONSLQ96HA7 1378 aa21.3■■□□□ 1
DEF8-210ENST00000563594 PDS5BQ9NTI5 1447 aa21.3■■□□□ 1
DEF8-210ENST00000563594 ANP32CO43423 234 aa21.29■■□□□ 1
DEF8-210ENST00000563594 KANK4Q5T7N3 995 aaPredicted RBP21.28■■□□□ 1
DEF8-210ENST00000563594 TDRD9Q8NDG6 1382 aaKnown RBP21.28■■□□□ 1
DEF8-210ENST00000563594 GTF3C3Q9Y5Q9 886 aa21.27■■□□□ 1
DEF8-210ENST00000563594 ERCC6Q03468 1493 aa21.26■□□□□ 0.99
DEF8-210ENST00000563594 FHAD1B1AJZ9 1412 aa21.26■□□□□ 0.99
DEF8-210ENST00000563594 BICRAQ9NZM4 1560 aa21.24■□□□□ 0.99
DEF8-210ENST00000563594 ACIN1Q9UKV3 1341 aaKnown RBP21.22■□□□□ 0.99
DEF8-210ENST00000563594 RRP7BPQ9NSQ0 103 aa21.22■□□□□ 0.99
DEF8-210ENST00000563594 CCNB3Q8WWL7 1395 aa21.21■□□□□ 0.99
DEF8-210ENST00000563594 FANCD2Q9BXW9 1451 aa21.19■□□□□ 0.98
DEF8-210ENST00000563594 DDX10Q13206 875 aaKnown RBP21.15■□□□□ 0.98
DEF8-210ENST00000563594 TSPY4P0CV99 314 aa21.11■□□□□ 0.97
DEF8-210ENST00000563594 TSPY10P0CW01 314 aa21.11■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 112 ms