RNA–Protein interactions for RNA: ENST00000268676.11

DEF8-201, Transcript of differentially expressed in FDCP 8 homolog, humanhuman

TSL 2 BASIC

Gene DEF8, Length 3,725 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEF8-201ENST00000268676 NISCHQ9Y2I1 1504 aa21.57■■□□□ 1.04
DEF8-201ENST00000268676 DCAF8L2P0C7V8 631 aa19.78■□□□□ 0.76
DEF8-201ENST00000268676 SHROOM4Q9ULL8 1493 aa19.71■□□□□ 0.74
DEF8-201ENST00000268676 SUPT5HO00267 1087 aaKnown RBP19.62■□□□□ 0.73
DEF8-201ENST00000268676 EHMT2Q96KQ7 1210 aa18.85■□□□□ 0.61
DEF8-201ENST00000268676 PCGF6Q9BYE7 350 aa18.62■□□□□ 0.57
DEF8-201ENST00000268676 FAM9AQ8IZU1 332 aaPredicted RBP18.41■□□□□ 0.54
DEF8-201ENST00000268676 CCDC180Q9P1Z9 1646 aa18.31■□□□□ 0.52
DEF8-201ENST00000268676 LOC105371045A0A1W2PR82 267 aa18.28■□□□□ 0.52
DEF8-201ENST00000268676 PPARGC1BQ86YN6 1023 aaKnown RBP18.22■□□□□ 0.51
DEF8-201ENST00000268676 CHIC1Q5VXU3 224 aa18.21■□□□□ 0.51
DEF8-201ENST00000268676 TTBK1Q5TCY1 1321 aaPredicted RBP18.16■□□□□ 0.5
DEF8-201ENST00000268676 ZCCHC6Q5VYS8 1495 aaKnown RBP18.07■□□□□ 0.48
DEF8-201ENST00000268676 HRCP23327 699 aa17.98■□□□□ 0.47
DEF8-201ENST00000268676 TRIM41Q8WV44 630 aa17.88■□□□□ 0.45
DEF8-201ENST00000268676 ABCC9O60706 1549 aa17.88■□□□□ 0.45
DEF8-201ENST00000268676 MYO15BQ96JP2 1530 aa17.73■□□□□ 0.43
DEF8-201ENST00000268676 RANGAP1P46060 587 aaPredicted RBP17.68■□□□□ 0.42
DEF8-201ENST00000268676 TRIM26Q12899 539 aaPredicted RBP17.59■□□□□ 0.41
DEF8-201ENST00000268676 DCAF1Q9Y4B6 1507 aa17.5■□□□□ 0.39
DEF8-201ENST00000268676 CCER1Q8TC90 406 aaPredicted RBP17.49■□□□□ 0.39
DEF8-201ENST00000268676 SCRIBQ14160 1630 aa17.44■□□□□ 0.38
DEF8-201ENST00000268676 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.43■□□□□ 0.38
DEF8-201ENST00000268676 UBTFP17480 764 aaKnown RBP17.34■□□□□ 0.37
DEF8-201ENST00000268676 YTHDC1Q96MU7 727 aaKnown RBP17.31■□□□□ 0.36
DEF8-201ENST00000268676 NACADO15069 1562 aa17.25■□□□□ 0.35
DEF8-201ENST00000268676 ZEB1P37275 1124 aaPredicted RBP17.22■□□□□ 0.35
DEF8-201ENST00000268676 PABPN1Q86U42 306 aaKnown RBP eCLIP17.21■□□□□ 0.35
DEF8-201ENST00000268676 RB1CC1Q8TDY2 1594 aa17.15■□□□□ 0.34
DEF8-201ENST00000268676 HNRNPUL2Q1KMD3 747 aaKnown RBP17.13■□□□□ 0.33
DEF8-201ENST00000268676 APLP2Q06481 763 aa17.1■□□□□ 0.33
DEF8-201ENST00000268676 RSF1Q96T23 1441 aaPredicted RBP17■□□□□ 0.31
DEF8-201ENST00000268676 ITGAEP38570 1179 aa16.95■□□□□ 0.3
DEF8-201ENST00000268676 PELP1Q8IZL8 1130 aaKnown RBP16.95■□□□□ 0.3
DEF8-201ENST00000268676 DIEXFQ68CQ4 756 aaKnown RBP16.93■□□□□ 0.3
DEF8-201ENST00000268676 ATP1B4Q9UN42 357 aaPredicted RBP16.92■□□□□ 0.3
DEF8-201ENST00000268676 CECR2Q9BXF3 1484 aa16.91■□□□□ 0.3
DEF8-201ENST00000268676 CENPBP07199 599 aaPredicted RBP16.91■□□□□ 0.3
DEF8-201ENST00000268676 SCAF1Q9H7N4 1312 aaKnown RBP16.84■□□□□ 0.29
DEF8-201ENST00000268676 GTF3C3Q9Y5Q9 886 aa16.83■□□□□ 0.28
DEF8-201ENST00000268676 MROH2BQ7Z745 1585 aa16.76■□□□□ 0.27
DEF8-201ENST00000268676 NEUROD1Q13562 356 aa16.75■□□□□ 0.27
DEF8-201ENST00000268676 BAZ1AQ9NRL2 1556 aaPredicted RBP16.7■□□□□ 0.26
DEF8-201ENST00000268676 CSRNP3Q8WYN3 585 aa16.65■□□□□ 0.26
DEF8-201ENST00000268676 ACIN1Q9UKV3 1341 aaKnown RBP16.64■□□□□ 0.25
DEF8-201ENST00000268676 WIZO95785 1651 aa16.6■□□□□ 0.25
DEF8-201ENST00000268676 ZNF316A6NFI3 1004 aaPredicted RBP16.53■□□□□ 0.24
DEF8-201ENST00000268676 CNGB1Q14028 1251 aaPredicted RBP16.5■□□□□ 0.23
DEF8-201ENST00000268676 MIER1Q8N108 512 aa16.46■□□□□ 0.23
DEF8-201ENST00000268676 P3H3Q8IVL6 736 aa16.46■□□□□ 0.23
DEF8-201ENST00000268676 SMARCA4P51532 1647 aa16.45■□□□□ 0.22
DEF8-201ENST00000268676 BCANQ96GW7 911 aa16.45■□□□□ 0.22
DEF8-201ENST00000268676 SOGA1O94964 1423 aa16.42■□□□□ 0.22
DEF8-201ENST00000268676 ABCC8Q09428 1581 aa16.4■□□□□ 0.22
DEF8-201ENST00000268676 CCDC88BA6NC98 1476 aa16.39■□□□□ 0.21
DEF8-201ENST00000268676 BAZ1BQ9UIG0 1483 aaKnown RBP16.39■□□□□ 0.21
DEF8-201ENST00000268676 FAM50AQ14320 339 aaKnown RBP16.38■□□□□ 0.21
DEF8-201ENST00000268676 CEP162Q5TB80 1403 aa16.38■□□□□ 0.21
DEF8-201ENST00000268676 UNC13AQ9UPW8 1703 aa16.37■□□□□ 0.21
DEF8-201ENST00000268676 TOP2AP11388 1531 aaKnown RBP16.37■□□□□ 0.21
DEF8-201ENST00000268676 HIRIP3Q9BW71 556 aaPredicted RBP16.34■□□□□ 0.21
DEF8-201ENST00000268676 BICRAQ9NZM4 1560 aa16.33■□□□□ 0.2
DEF8-201ENST00000268676 ARID3CA6NKF2 412 aa16.27■□□□□ 0.19
DEF8-201ENST00000268676 ATAD2BQ9ULI0 1458 aa16.26■□□□□ 0.19
DEF8-201ENST00000268676 RUSC2Q8N2Y8 1516 aa16.25■□□□□ 0.19
DEF8-201ENST00000268676 SMARCA2P51531 1590 aa16.24■□□□□ 0.19
DEF8-201ENST00000268676 MYT1Q01538 1121 aa16.23■□□□□ 0.19
DEF8-201ENST00000268676 POLR3GLQ9BT43 218 aa16.21■□□□□ 0.19
DEF8-201ENST00000268676 WRNQ14191 1432 aaPredicted RBP eCLIP16.19■□□□□ 0.18
DEF8-201ENST00000268676 CLIP1P30622 1438 aa16.18■□□□□ 0.18
DEF8-201ENST00000268676 DDX10Q13206 875 aaKnown RBP16.15■□□□□ 0.18
DEF8-201ENST00000268676 NEFLP07196 543 aa16.12■□□□□ 0.17
DEF8-201ENST00000268676 TNIKQ9UKE5 1360 aa16.1■□□□□ 0.17
DEF8-201ENST00000268676 KANK4Q5T7N3 995 aaPredicted RBP16.09■□□□□ 0.17
DEF8-201ENST00000268676 TRIM52Q96A61 297 aa16.08■□□□□ 0.16
DEF8-201ENST00000268676 EIF4G1Q04637 1599 aaKnown RBP16.07■□□□□ 0.16
DEF8-201ENST00000268676 SENP3-EIF4A1A0A087X0R7 540 aa16.04■□□□□ 0.16
DEF8-201ENST00000268676 GOLGA3Q08378 1498 aa16.03■□□□□ 0.16
DEF8-201ENST00000268676 SIN3AQ96ST3 1273 aa16.02■□□□□ 0.16
DEF8-201ENST00000268676 EEA1Q15075 1411 aa16.01■□□□□ 0.15
DEF8-201ENST00000268676 FKBP8Q14318 412 aa15.99■□□□□ 0.15
DEF8-201ENST00000268676 KCNH8Q96L42 1107 aa15.98■□□□□ 0.15
DEF8-201ENST00000268676 NCAPD3P42695 1498 aa15.98■□□□□ 0.15
DEF8-201ENST00000268676 IRX6P78412 446 aaPredicted RBP15.96■□□□□ 0.15
DEF8-201ENST00000268676 CHIC2Q9UKJ5 165 aa15.96■□□□□ 0.15
DEF8-201ENST00000268676 PEG3Q9GZU2 1588 aa15.95■□□□□ 0.14
DEF8-201ENST00000268676 ZNF326Q5BKZ1 582 aaKnown RBP15.94■□□□□ 0.14
DEF8-201ENST00000268676 ERICH6Q7L0X2 663 aa15.93■□□□□ 0.14
DEF8-201ENST00000268676 ANP32CO43423 234 aa15.88■□□□□ 0.13
DEF8-201ENST00000268676 RAPGEF2Q9Y4G8 1499 aa15.87■□□□□ 0.13
DEF8-201ENST00000268676 CEP164Q9UPV0 1460 aa15.86■□□□□ 0.13
DEF8-201ENST00000268676 CADPSQ9ULU8 1353 aa15.85■□□□□ 0.13
DEF8-201ENST00000268676 HMGXB3Q12766 1538 aa15.84■□□□□ 0.13
DEF8-201ENST00000268676 KIF27Q86VH2 1401 aa15.81■□□□□ 0.12
DEF8-201ENST00000268676 SUPT16HQ9Y5B9 1047 aaKnown RBP15.81■□□□□ 0.12
DEF8-201ENST00000268676 VPS8Q8N3P4 1428 aa15.79■□□□□ 0.12
DEF8-201ENST00000268676 RRP7BPQ9NSQ0 103 aa15.79■□□□□ 0.12
DEF8-201ENST00000268676 SYNJ1O43426 1573 aa15.79■□□□□ 0.12
DEF8-201ENST00000268676 HNRNPUQ00839 825 aaKnown RBP eCLIP15.79■□□□□ 0.12
DEF8-201ENST00000268676 CC2D2AQ9P2K1 1620 aa15.79■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms