RNA–Protein interactions for RNA: ENST00000521724.5

CTNNA1-230, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 2,741 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-230ENST00000521724 NISCHQ9Y2I1 1504 aa18.57■□□□□ 0.56
CTNNA1-230ENST00000521724 CHIC1Q5VXU3 224 aa16.62■□□□□ 0.25
CTNNA1-230ENST00000521724 SLC24A1O60721 1099 aa16.43■□□□□ 0.22
CTNNA1-230ENST00000521724 HRCP23327 699 aa16.24■□□□□ 0.19
CTNNA1-230ENST00000521724 SHROOM4Q9ULL8 1493 aa16.16■□□□□ 0.18
CTNNA1-230ENST00000521724 SUPT5HO00267 1087 aaKnown RBP15.9■□□□□ 0.14
CTNNA1-230ENST00000521724 PCGF6Q9BYE7 350 aa15.88■□□□□ 0.13
CTNNA1-230ENST00000521724 PPARGC1BQ86YN6 1023 aaKnown RBP15.87■□□□□ 0.13
CTNNA1-230ENST00000521724 PELP1Q8IZL8 1130 aaKnown RBP15.84■□□□□ 0.13
CTNNA1-230ENST00000521724 EHMT2Q96KQ7 1210 aa15.84■□□□□ 0.13
CTNNA1-230ENST00000521724 ZCCHC6Q5VYS8 1495 aaKnown RBP15.72■□□□□ 0.11
CTNNA1-230ENST00000521724 AEBP2Q6ZN18 517 aaPredicted RBP15.72■□□□□ 0.11
CTNNA1-230ENST00000521724 MYO15BQ96JP2 1530 aa15.71■□□□□ 0.11
CTNNA1-230ENST00000521724 DCAF8L2P0C7V8 631 aa15.59■□□□□ 0.09
CTNNA1-230ENST00000521724 CCDC180Q9P1Z9 1646 aa15.57■□□□□ 0.08
CTNNA1-230ENST00000521724 DCAF1Q9Y4B6 1507 aa15.44■□□□□ 0.06
CTNNA1-230ENST00000521724 SCAF1Q9H7N4 1312 aaKnown RBP15.39■□□□□ 0.05
CTNNA1-230ENST00000521724 TRIM26Q12899 539 aaPredicted RBP15.36■□□□□ 0.05
CTNNA1-230ENST00000521724 ZEB1P37275 1124 aaPredicted RBP15.28■□□□□ 0.04
CTNNA1-230ENST00000521724 LOC105371045A0A1W2PR82 267 aa15.28■□□□□ 0.04
CTNNA1-230ENST00000521724 MYT1Q01538 1121 aa15.27■□□□□ 0.03
CTNNA1-230ENST00000521724 PLPPR3Q6T4P5 718 aa15.27■□□□□ 0.03
CTNNA1-230ENST00000521724 RTN4Q9NQC3 1192 aaKnown RBP15.08■□□□□ 0
CTNNA1-230ENST00000521724 PHF23Q9BUL5 403 aaPredicted RBP15.06■□□□□ 0
CTNNA1-230ENST00000521724 ACIN1Q9UKV3 1341 aaKnown RBP15.02□□□□□ -0.01
CTNNA1-230ENST00000521724 NEUROD1Q13562 356 aa14.96□□□□□ -0.01
CTNNA1-230ENST00000521724 GTF3C3Q9Y5Q9 886 aa14.91□□□□□ -0.02
CTNNA1-230ENST00000521724 CENPBP07199 599 aaPredicted RBP14.86□□□□□ -0.03
CTNNA1-230ENST00000521724 ABCC9O60706 1549 aa14.83□□□□□ -0.04
CTNNA1-230ENST00000521724 RSF1Q96T23 1441 aaPredicted RBP14.82□□□□□ -0.04
CTNNA1-230ENST00000521724 SCRIBQ14160 1630 aa14.82□□□□□ -0.04
CTNNA1-230ENST00000521724 DIEXFQ68CQ4 756 aaKnown RBP14.73□□□□□ -0.05
CTNNA1-230ENST00000521724 FAM9AQ8IZU1 332 aaPredicted RBP14.72□□□□□ -0.05
CTNNA1-230ENST00000521724 TRIM41Q8WV44 630 aa14.7□□□□□ -0.06
CTNNA1-230ENST00000521724 CCER1Q8TC90 406 aaPredicted RBP14.69□□□□□ -0.06
CTNNA1-230ENST00000521724 CSRNP3Q8WYN3 585 aa14.69□□□□□ -0.06
CTNNA1-230ENST00000521724 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.68□□□□□ -0.06
CTNNA1-230ENST00000521724 KCNA4P22459 653 aa14.68□□□□□ -0.06
CTNNA1-230ENST00000521724 RB1CC1Q8TDY2 1594 aa14.68□□□□□ -0.06
CTNNA1-230ENST00000521724 AMER1Q5JTC6 1135 aaPredicted RBP14.61□□□□□ -0.07
CTNNA1-230ENST00000521724 CECR2Q9BXF3 1484 aa14.61□□□□□ -0.07
CTNNA1-230ENST00000521724 DAXXQ9UER7 740 aaPredicted RBP14.59□□□□□ -0.07
CTNNA1-230ENST00000521724 NCBP3Q53F19 620 aaKnown RBP14.59□□□□□ -0.07
CTNNA1-230ENST00000521724 MROH2BQ7Z745 1585 aa14.52□□□□□ -0.08
CTNNA1-230ENST00000521724 YTHDC1Q96MU7 727 aaKnown RBP14.5□□□□□ -0.09
CTNNA1-230ENST00000521724 WIZO95785 1651 aa14.45□□□□□ -0.1
CTNNA1-230ENST00000521724 NACADO15069 1562 aa14.43□□□□□ -0.1
CTNNA1-230ENST00000521724 ZNF316A6NFI3 1004 aaPredicted RBP14.42□□□□□ -0.1
CTNNA1-230ENST00000521724 PRKCSHP14314 528 aaPredicted RBP14.39□□□□□ -0.11
CTNNA1-230ENST00000521724 TTBK1Q5TCY1 1321 aaPredicted RBP14.33□□□□□ -0.12
CTNNA1-230ENST00000521724 MIER1Q8N108 512 aa14.32□□□□□ -0.12
CTNNA1-230ENST00000521724 BAZ1AQ9NRL2 1556 aaPredicted RBP14.25□□□□□ -0.13
CTNNA1-230ENST00000521724 EIF4G1Q04637 1599 aaKnown RBP14.25□□□□□ -0.13
CTNNA1-230ENST00000521724 BCL11AQ9H165 835 aa14.22□□□□□ -0.13
CTNNA1-230ENST00000521724 ABCC8Q09428 1581 aa14.22□□□□□ -0.13
CTNNA1-230ENST00000521724 ANP32EQ9BTT0 268 aa14.21□□□□□ -0.14
CTNNA1-230ENST00000521724 CCDC88BA6NC98 1476 aa14.19□□□□□ -0.14
CTNNA1-230ENST00000521724 PABPN1Q86U42 306 aaKnown RBP eCLIP14.19□□□□□ -0.14
CTNNA1-230ENST00000521724 CLSPNQ9HAW4 1339 aa14.16□□□□□ -0.14
CTNNA1-230ENST00000521724 WRNQ14191 1432 aaPredicted RBP eCLIP14.16□□□□□ -0.14
CTNNA1-230ENST00000521724 SUPT16HQ9Y5B9 1047 aaKnown RBP14.16□□□□□ -0.14
CTNNA1-230ENST00000521724 UNC13AQ9UPW8 1703 aa14.14□□□□□ -0.15
CTNNA1-230ENST00000521724 SOGA1O94964 1423 aa14.13□□□□□ -0.15
CTNNA1-230ENST00000521724 TOP2AP11388 1531 aaKnown RBP14.11□□□□□ -0.15
CTNNA1-230ENST00000521724 TSHZ2Q9NRE2 1034 aa14.11□□□□□ -0.15
CTNNA1-230ENST00000521724 SMARCA4P51532 1647 aa14.1□□□□□ -0.15
CTNNA1-230ENST00000521724 RUSC2Q8N2Y8 1516 aa14.09□□□□□ -0.15
CTNNA1-230ENST00000521724 SMARCA2P51531 1590 aa14.09□□□□□ -0.15
CTNNA1-230ENST00000521724 CEP162Q5TB80 1403 aa14.07□□□□□ -0.16
CTNNA1-230ENST00000521724 HNRNPUL2Q1KMD3 747 aaKnown RBP14.01□□□□□ -0.17
CTNNA1-230ENST00000521724 SLC4A1APQ9BWU0 796 aaKnown RBP14.01□□□□□ -0.17
CTNNA1-230ENST00000521724 UBTFP17480 764 aaKnown RBP14□□□□□ -0.17
CTNNA1-230ENST00000521724 TNIKQ9UKE5 1360 aa13.99□□□□□ -0.17
CTNNA1-230ENST00000521724 TIMELESSQ9UNS1 1208 aa13.97□□□□□ -0.17
CTNNA1-230ENST00000521724 BICRAQ9NZM4 1560 aa13.95□□□□□ -0.18
CTNNA1-230ENST00000521724 EEA1Q15075 1411 aa13.86□□□□□ -0.19
CTNNA1-230ENST00000521724 ARXQ96QS3 562 aa13.86□□□□□ -0.19
CTNNA1-230ENST00000521724 BCANQ96GW7 911 aa13.85□□□□□ -0.19
CTNNA1-230ENST00000521724 GOLGA3Q08378 1498 aa13.85□□□□□ -0.19
CTNNA1-230ENST00000521724 TAOK2Q9UL54 1235 aa13.84□□□□□ -0.19
CTNNA1-230ENST00000521724 SYNJ1O43426 1573 aa13.83□□□□□ -0.2
CTNNA1-230ENST00000521724 RANGAP1P46060 587 aaPredicted RBP13.82□□□□□ -0.2
CTNNA1-230ENST00000521724 TULP1O00294 542 aaPredicted RBP13.79□□□□□ -0.2
CTNNA1-230ENST00000521724 RBM19Q9Y4C8 960 aaKnown RBP13.79□□□□□ -0.2
CTNNA1-230ENST00000521724 FKBP8Q14318 412 aa13.78□□□□□ -0.2
CTNNA1-230ENST00000521724 APLP2Q06481 763 aa13.77□□□□□ -0.21
CTNNA1-230ENST00000521724 PEG3Q9GZU2 1588 aa13.76□□□□□ -0.21
CTNNA1-230ENST00000521724 CLIP1P30622 1438 aa13.75□□□□□ -0.21
CTNNA1-230ENST00000521724 CEP164Q9UPV0 1460 aa13.75□□□□□ -0.21
CTNNA1-230ENST00000521724 ATAD2BQ9ULI0 1458 aa13.74□□□□□ -0.21
CTNNA1-230ENST00000521724 RAPGEF2Q9Y4G8 1499 aa13.74□□□□□ -0.21
CTNNA1-230ENST00000521724 KCNH8Q96L42 1107 aa13.73□□□□□ -0.21
CTNNA1-230ENST00000521724 DHX57Q6P158 1386 aaKnown RBP13.71□□□□□ -0.21
CTNNA1-230ENST00000521724 NEFLP07196 543 aa13.7□□□□□ -0.22
CTNNA1-230ENST00000521724 KIF21BO75037 1637 aa13.7□□□□□ -0.22
CTNNA1-230ENST00000521724 BAZ1BQ9UIG0 1483 aaKnown RBP13.69□□□□□ -0.22
CTNNA1-230ENST00000521724 VPS8Q8N3P4 1428 aa13.68□□□□□ -0.22
CTNNA1-230ENST00000521724 TPRNQ4KMQ1 711 aa13.68□□□□□ -0.22
CTNNA1-230ENST00000521724 ADRA2BP18089 450 aa13.65□□□□□ -0.22
CTNNA1-230ENST00000521724 ITGAEP38570 1179 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms