RNA–Protein interactions for RNA: ENST00000570182.5

DEF8-227, Transcript of differentially expressed in FDCP 8 homolog, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene DEF8, Length 3,549 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEF8-227ENST00000570182 NISCHQ9Y2I1 1504 aa22.41■■□□□ 1.18
DEF8-227ENST00000570182 SHROOM4Q9ULL8 1493 aa19.69■□□□□ 0.74
DEF8-227ENST00000570182 DCAF8L2P0C7V8 631 aa19.62■□□□□ 0.73
DEF8-227ENST00000570182 SUPT5HO00267 1087 aaKnown RBP19.51■□□□□ 0.71
DEF8-227ENST00000570182 CCDC180Q9P1Z9 1646 aa19.08■□□□□ 0.64
DEF8-227ENST00000570182 CHIC1Q5VXU3 224 aa18.87■□□□□ 0.61
DEF8-227ENST00000570182 ZCCHC6Q5VYS8 1495 aaKnown RBP18.82■□□□□ 0.6
DEF8-227ENST00000570182 PCGF6Q9BYE7 350 aa18.77■□□□□ 0.59
DEF8-227ENST00000570182 HRCP23327 699 aa18.76■□□□□ 0.59
DEF8-227ENST00000570182 MYO15BQ96JP2 1530 aa18.73■□□□□ 0.59
DEF8-227ENST00000570182 EHMT2Q96KQ7 1210 aa18.67■□□□□ 0.58
DEF8-227ENST00000570182 ABCC9O60706 1549 aa18.59■□□□□ 0.57
DEF8-227ENST00000570182 PPARGC1BQ86YN6 1023 aaKnown RBP18.52■□□□□ 0.55
DEF8-227ENST00000570182 LOC105371045A0A1W2PR82 267 aa18.5■□□□□ 0.55
DEF8-227ENST00000570182 FAM9AQ8IZU1 332 aaPredicted RBP18.24■□□□□ 0.51
DEF8-227ENST00000570182 DCAF1Q9Y4B6 1507 aa18.21■□□□□ 0.51
DEF8-227ENST00000570182 TRIM26Q12899 539 aaPredicted RBP18.17■□□□□ 0.5
DEF8-227ENST00000570182 SCRIBQ14160 1630 aa18.11■□□□□ 0.49
DEF8-227ENST00000570182 TRIM41Q8WV44 630 aa18.04■□□□□ 0.48
DEF8-227ENST00000570182 TTBK1Q5TCY1 1321 aaPredicted RBP17.97■□□□□ 0.47
DEF8-227ENST00000570182 NACADO15069 1562 aa17.93■□□□□ 0.46
DEF8-227ENST00000570182 PELP1Q8IZL8 1130 aaKnown RBP17.92■□□□□ 0.46
DEF8-227ENST00000570182 ZEB1P37275 1124 aaPredicted RBP17.85■□□□□ 0.45
DEF8-227ENST00000570182 RSF1Q96T23 1441 aaPredicted RBP17.84■□□□□ 0.45
DEF8-227ENST00000570182 PABPN1Q86U42 306 aaKnown RBP eCLIP17.82■□□□□ 0.44
DEF8-227ENST00000570182 RB1CC1Q8TDY2 1594 aa17.82■□□□□ 0.44
DEF8-227ENST00000570182 CECR2Q9BXF3 1484 aa17.6■□□□□ 0.41
DEF8-227ENST00000570182 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.55■□□□□ 0.4
DEF8-227ENST00000570182 CCER1Q8TC90 406 aaPredicted RBP17.53■□□□□ 0.4
DEF8-227ENST00000570182 RANGAP1P46060 587 aaPredicted RBP17.51■□□□□ 0.39
DEF8-227ENST00000570182 SCAF1Q9H7N4 1312 aaKnown RBP17.51■□□□□ 0.39
DEF8-227ENST00000570182 MROH2BQ7Z745 1585 aa17.43■□□□□ 0.38
DEF8-227ENST00000570182 MYT1Q01538 1121 aa17.33■□□□□ 0.36
DEF8-227ENST00000570182 BAZ1AQ9NRL2 1556 aaPredicted RBP17.28■□□□□ 0.36
DEF8-227ENST00000570182 WIZO95785 1651 aa17.28■□□□□ 0.36
DEF8-227ENST00000570182 DIEXFQ68CQ4 756 aaKnown RBP17.26■□□□□ 0.35
DEF8-227ENST00000570182 NEUROD1Q13562 356 aa17.25■□□□□ 0.35
DEF8-227ENST00000570182 ACIN1Q9UKV3 1341 aaKnown RBP17.24■□□□□ 0.35
DEF8-227ENST00000570182 UBTFP17480 764 aaKnown RBP17.23■□□□□ 0.35
DEF8-227ENST00000570182 UNC13AQ9UPW8 1703 aa17.19■□□□□ 0.34
DEF8-227ENST00000570182 CENPBP07199 599 aaPredicted RBP17.16■□□□□ 0.34
DEF8-227ENST00000570182 BICRAQ9NZM4 1560 aa17.16■□□□□ 0.34
DEF8-227ENST00000570182 GTF3C3Q9Y5Q9 886 aa17.15■□□□□ 0.34
DEF8-227ENST00000570182 SMARCA4P51532 1647 aa17.12■□□□□ 0.33
DEF8-227ENST00000570182 CCDC88BA6NC98 1476 aa17.11■□□□□ 0.33
DEF8-227ENST00000570182 ABCC8Q09428 1581 aa17.11■□□□□ 0.33
DEF8-227ENST00000570182 CSRNP3Q8WYN3 585 aa17.09■□□□□ 0.33
DEF8-227ENST00000570182 CEP162Q5TB80 1403 aa17.08■□□□□ 0.33
DEF8-227ENST00000570182 SOGA1O94964 1423 aa17.08■□□□□ 0.32
DEF8-227ENST00000570182 YTHDC1Q96MU7 727 aaKnown RBP17.07■□□□□ 0.32
DEF8-227ENST00000570182 HNRNPUL2Q1KMD3 747 aaKnown RBP17.04■□□□□ 0.32
DEF8-227ENST00000570182 ZNF316A6NFI3 1004 aaPredicted RBP17.01■□□□□ 0.31
DEF8-227ENST00000570182 TNIKQ9UKE5 1360 aa16.99■□□□□ 0.31
DEF8-227ENST00000570182 TOP2AP11388 1531 aaKnown RBP16.98■□□□□ 0.31
DEF8-227ENST00000570182 WRNQ14191 1432 aaPredicted RBP eCLIP16.97■□□□□ 0.31
DEF8-227ENST00000570182 RUSC2Q8N2Y8 1516 aa16.97■□□□□ 0.31
DEF8-227ENST00000570182 BAZ1BQ9UIG0 1483 aaKnown RBP16.95■□□□□ 0.3
DEF8-227ENST00000570182 EIF4G1Q04637 1599 aaKnown RBP16.92■□□□□ 0.3
DEF8-227ENST00000570182 ATAD2BQ9ULI0 1458 aa16.92■□□□□ 0.3
DEF8-227ENST00000570182 APLP2Q06481 763 aa16.91■□□□□ 0.3
DEF8-227ENST00000570182 SMARCA2P51531 1590 aa16.87■□□□□ 0.29
DEF8-227ENST00000570182 MIER1Q8N108 512 aa16.86■□□□□ 0.29
DEF8-227ENST00000570182 EEA1Q15075 1411 aa16.84■□□□□ 0.29
DEF8-227ENST00000570182 GOLGA3Q08378 1498 aa16.83■□□□□ 0.28
DEF8-227ENST00000570182 ITGAEP38570 1179 aa16.76■□□□□ 0.27
DEF8-227ENST00000570182 CLIP1P30622 1438 aa16.75■□□□□ 0.27
DEF8-227ENST00000570182 ATP1B4Q9UN42 357 aaPredicted RBP16.71■□□□□ 0.27
DEF8-227ENST00000570182 CEP164Q9UPV0 1460 aa16.68■□□□□ 0.26
DEF8-227ENST00000570182 PEG3Q9GZU2 1588 aa16.66■□□□□ 0.26
DEF8-227ENST00000570182 NCAPD3P42695 1498 aa16.63■□□□□ 0.25
DEF8-227ENST00000570182 VPS8Q8N3P4 1428 aa16.62■□□□□ 0.25
DEF8-227ENST00000570182 RAPGEF2Q9Y4G8 1499 aa16.59■□□□□ 0.25
DEF8-227ENST00000570182 SYNJ1O43426 1573 aa16.57■□□□□ 0.24
DEF8-227ENST00000570182 KANK4Q5T7N3 995 aaPredicted RBP16.52■□□□□ 0.23
DEF8-227ENST00000570182 CC2D2AQ9P2K1 1620 aa16.5■□□□□ 0.23
DEF8-227ENST00000570182 HMGXB3Q12766 1538 aa16.5■□□□□ 0.23
DEF8-227ENST00000570182 KIF21BO75037 1637 aa16.49■□□□□ 0.23
DEF8-227ENST00000570182 DHX57Q6P158 1386 aaKnown RBP16.44■□□□□ 0.22
DEF8-227ENST00000570182 DNAJC5BQ9UF47 199 aa16.42■□□□□ 0.22
DEF8-227ENST00000570182 CADPSQ9ULU8 1353 aa16.42■□□□□ 0.22
DEF8-227ENST00000570182 CLSPNQ9HAW4 1339 aa16.4■□□□□ 0.22
DEF8-227ENST00000570182 CFTRP13569 1480 aa16.36■□□□□ 0.21
DEF8-227ENST00000570182 SUPT16HQ9Y5B9 1047 aaKnown RBP16.36■□□□□ 0.21
DEF8-227ENST00000570182 P3H3Q8IVL6 736 aa16.36■□□□□ 0.21
DEF8-227ENST00000570182 BCL11AQ9H165 835 aa16.34■□□□□ 0.21
DEF8-227ENST00000570182 ARAP1Q96P48 1450 aa16.3■□□□□ 0.2
DEF8-227ENST00000570182 KCNH8Q96L42 1107 aa16.3■□□□□ 0.2
DEF8-227ENST00000570182 NESP48681 1621 aa16.29■□□□□ 0.2
DEF8-227ENST00000570182 CCNB3Q8WWL7 1395 aa16.28■□□□□ 0.2
DEF8-227ENST00000570182 PRXQ9BXM0 1461 aa16.27■□□□□ 0.2
DEF8-227ENST00000570182 CNGB1Q14028 1251 aaPredicted RBP16.27■□□□□ 0.2
DEF8-227ENST00000570182 BCANQ96GW7 911 aa16.27■□□□□ 0.19
DEF8-227ENST00000570182 TOP2BQ02880 1626 aa16.26■□□□□ 0.19
DEF8-227ENST00000570182 FAM50AQ14320 339 aaKnown RBP16.26■□□□□ 0.19
DEF8-227ENST00000570182 KIF27Q86VH2 1401 aa16.26■□□□□ 0.19
DEF8-227ENST00000570182 FANCD2Q9BXW9 1451 aa16.25■□□□□ 0.19
DEF8-227ENST00000570182 CUX1P39880 1505 aa16.24■□□□□ 0.19
DEF8-227ENST00000570182 DDX10Q13206 875 aaKnown RBP16.24■□□□□ 0.19
DEF8-227ENST00000570182 SIN3AQ96ST3 1273 aa16.22■□□□□ 0.19
DEF8-227ENST00000570182 CUX2O14529 1486 aa16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms