RNA–Protein interactions for RNA: ENST00000567999.5

DEF8-221, Transcript of differentially expressed in FDCP 8 homolog, humanhuman

TSL 1 (best)

Gene DEF8, Length 578 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEF8-221ENST00000567999 NISCHQ9Y2I1 1504 aa53.17■■■■■ 6.1
DEF8-221ENST00000567999 CCDC180Q9P1Z9 1646 aa47.37■■■■■ 5.17
DEF8-221ENST00000567999 ABCC9O60706 1549 aa46.57■■■■■ 5.05
DEF8-221ENST00000567999 RB1CC1Q8TDY2 1594 aa44.65■■■■■ 4.74
DEF8-221ENST00000567999 NACADO15069 1562 aa44.52■■■■■ 4.72
DEF8-221ENST00000567999 DCAF8L2P0C7V8 631 aa44.48■■■■■ 4.71
DEF8-221ENST00000567999 ZCCHC6Q5VYS8 1495 aaKnown RBP44.27■■■■■ 4.68
DEF8-221ENST00000567999 MYO15BQ96JP2 1530 aa44.14■■■■■ 4.66
DEF8-221ENST00000567999 DCAF1Q9Y4B6 1507 aa43.92■■■■■ 4.62
DEF8-221ENST00000567999 UNC13AQ9UPW8 1703 aa43.78■■■■■ 4.6
DEF8-221ENST00000567999 PABPN1Q86U42 306 aaKnown RBP eCLIP43.47■■■■■ 4.55
DEF8-221ENST00000567999 BICRAQ9NZM4 1560 aa43.39■■■■■ 4.54
DEF8-221ENST00000567999 SCRIBQ14160 1630 aa43.3■■■■■ 4.52
DEF8-221ENST00000567999 DNAJC5BQ9UF47 199 aa42.91■■■■■ 4.46
DEF8-221ENST00000567999 SHROOM4Q9ULL8 1493 aa42.74■■■■■ 4.43
DEF8-221ENST00000567999 EIF4G1Q04637 1599 aaKnown RBP42.22■■■■■ 4.35
DEF8-221ENST00000567999 CC2D2AQ9P2K1 1620 aa42.12■■■■■ 4.33
DEF8-221ENST00000567999 CECR2Q9BXF3 1484 aa41.82■■■■■ 4.29
DEF8-221ENST00000567999 SMARCA4P51532 1647 aa41.34■■■■■ 4.21
DEF8-221ENST00000567999 BAZ1AQ9NRL2 1556 aaPredicted RBP41.2■■■■■ 4.19
DEF8-221ENST00000567999 ATAD2BQ9ULI0 1458 aa41.12■■■■■ 4.17
DEF8-221ENST00000567999 NCAPD3P42695 1498 aa41.07■■■■■ 4.16
DEF8-221ENST00000567999 MROH2BQ7Z745 1585 aa41.03■■■■■ 4.16
DEF8-221ENST00000567999 SMARCA2P51531 1590 aa41.03■■■■■ 4.16
DEF8-221ENST00000567999 HMGXB3Q12766 1538 aa40.89■■■■■ 4.14
DEF8-221ENST00000567999 PEG3Q9GZU2 1588 aa40.88■■■■■ 4.13
DEF8-221ENST00000567999 BAZ1BQ9UIG0 1483 aaKnown RBP40.77■■■■■ 4.12
DEF8-221ENST00000567999 WIZO95785 1651 aa40.62■■■■■ 4.09
DEF8-221ENST00000567999 RSF1Q96T23 1441 aaPredicted RBP40.45■■■■■ 4.07
DEF8-221ENST00000567999 NESP48681 1621 aa40.28■■■■■ 4.04
DEF8-221ENST00000567999 TOP2AP11388 1531 aaKnown RBP40.11■■■■■ 4.01
DEF8-221ENST00000567999 ERCC6Q03468 1493 aa40.1■■■■■ 4.01
DEF8-221ENST00000567999 LAMC3Q9Y6N6 1575 aa40.05■■■■■ 4
DEF8-221ENST00000567999 CADPSQ9ULU8 1353 aa39.86■■■■□ 3.97
DEF8-221ENST00000567999 KIF21AQ7Z4S6 1674 aa39.83■■■■□ 3.97
DEF8-221ENST00000567999 PDS5BQ9NTI5 1447 aa39.74■■■■□ 3.95
DEF8-221ENST00000567999 THOC2Q8NI27 1593 aaKnown RBP39.71■■■■□ 3.95
DEF8-221ENST00000567999 CUX2O14529 1486 aa39.69■■■■□ 3.94
DEF8-221ENST00000567999 CCDC88BA6NC98 1476 aa39.64■■■■□ 3.94
DEF8-221ENST00000567999 CFTRP13569 1480 aa39.62■■■■□ 3.93
DEF8-221ENST00000567999 FANCD2Q9BXW9 1451 aa39.47■■■■□ 3.91
DEF8-221ENST00000567999 CEP164Q9UPV0 1460 aa39.43■■■■□ 3.9
DEF8-221ENST00000567999 MRC2Q9UBG0 1479 aa39.41■■■■□ 3.9
DEF8-221ENST00000567999 PRDM2Q13029 1718 aa39.4■■■■□ 3.9
DEF8-221ENST00000567999 WDR62O43379 1518 aa39.31■■■■□ 3.88
DEF8-221ENST00000567999 SUPT5HO00267 1087 aaKnown RBP39.3■■■■□ 3.88
DEF8-221ENST00000567999 URB2Q14146 1524 aaKnown RBP39.13■■■■□ 3.85
DEF8-221ENST00000567999 TOPBP1Q92547 1522 aa38.83■■■■□ 3.81
DEF8-221ENST00000567999 DNMBPQ6XZF7 1577 aa38.77■■■■□ 3.8
DEF8-221ENST00000567999 ABCC8Q09428 1581 aa38.69■■■■□ 3.78
DEF8-221ENST00000567999 DNAJC5Q9H3Z4 198 aa38.67■■■■□ 3.78
DEF8-221ENST00000567999 IFT140Q96RY7 1462 aa38.57■■■■□ 3.76
DEF8-221ENST00000567999 ZNF608Q9ULD9 1512 aaPredicted RBP38.52■■■■□ 3.76
DEF8-221ENST00000567999 CUX1P39880 1505 aa38.51■■■■□ 3.76
DEF8-221ENST00000567999 POLA1P09884 1462 aaPredicted RBP38.49■■■■□ 3.75
DEF8-221ENST00000567999 TARBP1Q13395 1621 aaKnown RBP38.45■■■■□ 3.75
DEF8-221ENST00000567999 FGD5Q6ZNL6 1462 aa38.38■■■■□ 3.73
DEF8-221ENST00000567999 EIF4G3O43432 1585 aaKnown RBP38.37■■■■□ 3.73
DEF8-221ENST00000567999 RAD54L2Q9Y4B4 1467 aa38.36■■■■□ 3.73
DEF8-221ENST00000567999 SOGA1O94964 1423 aa38.28■■■■□ 3.72
DEF8-221ENST00000567999 AQRO60306 1485 aaKnown RBP eCLIP38.24■■■■□ 3.712e-8■■■■■ 47.5
DEF8-221ENST00000567999 SYNJ1O43426 1573 aa38.14■■■■□ 3.7
DEF8-221ENST00000567999 WDR97A6NE52 1622 aa38.13■■■■□ 3.69
DEF8-221ENST00000567999 TDRD9Q8NDG6 1382 aaKnown RBP38.13■■■■□ 3.69
DEF8-221ENST00000567999 BIVM-ERCC5R4GMW8 1640 aa38.12■■■■□ 3.69
DEF8-221ENST00000567999 WRNQ14191 1432 aaPredicted RBP eCLIP38.12■■■■□ 3.69
DEF8-221ENST00000567999 TOP2BQ02880 1626 aa38.09■■■■□ 3.69
DEF8-221ENST00000567999 OSCARQ8IYS5 282 aa37.97■■■■□ 3.67
DEF8-221ENST00000567999 ABCA10Q8WWZ4 1543 aa37.96■■■■□ 3.67
DEF8-221ENST00000567999 CHD1O14646 1710 aa37.95■■■■□ 3.67
DEF8-221ENST00000567999 ABCA5Q8WWZ7 1642 aa37.9■■■■□ 3.66
DEF8-221ENST00000567999 SNAPC4Q5SXM2 1469 aa37.9■■■■□ 3.66
DEF8-221ENST00000567999 PBRM1Q86U86 1689 aa37.88■■■■□ 3.66
DEF8-221ENST00000567999 GRIN2BQ13224 1484 aa37.85■■■■□ 3.65
DEF8-221ENST00000567999 GAPVD1Q14C86 1478 aa37.85■■■■□ 3.65
DEF8-221ENST00000567999 FBLN2P98095 1184 aa37.77■■■■□ 3.64
DEF8-221ENST00000567999 MAGI1Q96QZ7 1491 aaPredicted RBP37.77■■■■□ 3.64
DEF8-221ENST00000567999 SYNJ2O15056 1496 aa37.64■■■■□ 3.62
DEF8-221ENST00000567999 CHMP7Q8WUX9 453 aaPredicted RBP37.59■■■■□ 3.61
DEF8-221ENST00000567999 ADAMTS12P58397 1594 aa37.55■■■■□ 3.6
DEF8-221ENST00000567999 RIMBP3CA6NJZ7 1639 aa37.54■■■■□ 3.6
DEF8-221ENST00000567999 RIMBP3BA6NNM3 1639 aa37.54■■■■□ 3.6
DEF8-221ENST00000567999 RIMBP3Q9UFD9 1639 aa37.54■■■■□ 3.6
DEF8-221ENST00000567999 ERICH3Q5RHP9 1530 aa37.49■■■■□ 3.59
DEF8-221ENST00000567999 ARHGEF11O15085 1522 aa37.48■■■■□ 3.59
DEF8-221ENST00000567999 CLASP1Q7Z460 1538 aa37.47■■■■□ 3.59
DEF8-221ENST00000567999 TRIM41Q8WV44 630 aa37.42■■■■□ 3.58
DEF8-221ENST00000567999 GRIN2AQ12879 1464 aa37.4■■■■□ 3.58
DEF8-221ENST00000567999 FHAD1B1AJZ9 1412 aa37.38■■■■□ 3.57
DEF8-221ENST00000567999 KIF27Q86VH2 1401 aa37.3■■■■□ 3.56
DEF8-221ENST00000567999 CEP170Q5SW79 1584 aa37.29■■■■□ 3.56
DEF8-221ENST00000567999 NUP160Q12769 1436 aa37.22■■■■□ 3.55
DEF8-221ENST00000567999 IGF1RP08069 1367 aa37.19■■■■□ 3.54
DEF8-221ENST00000567999 ARAP1Q96P48 1450 aa37.19■■■■□ 3.54
DEF8-221ENST00000567999 CUL7Q14999 1698 aa37.15■■■■□ 3.54
DEF8-221ENST00000567999 CYB5RLQ6IPT4 315 aa37.09■■■■□ 3.53
DEF8-221ENST00000567999 RUSC2Q8N2Y8 1516 aa37.05■■■■□ 3.52
DEF8-221ENST00000567999 ERCC6L2Q5T890 1561 aa37.02■■■■□ 3.52
DEF8-221ENST00000567999 SHROOM2Q13796 1616 aa37.01■■■■□ 3.52
DEF8-221ENST00000567999 CARMIL1Q5VZK9 1371 aa36.95■■■■□ 3.51
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms