Protein–RNA interactions for Protein: Q9NQT4

EXOSC5, Exosome complex component RRP46, humanhuman

Known RBP eCLIP

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC5Q9NQT4 C1orf159-203ENST00000379325 2010 ntTSL 214.31□□□□□ -0.121e-6■■■■□ 19.7
EXOSC5Q9NQT4 C1orf159-218ENST00000482816 982 ntTSL 514.31□□□□□ -0.121e-6■■■■□ 19.7
EXOSC5Q9NQT4 C1orf159-207ENST00000434641 842 ntAPPRIS ALT2 TSL 513.56□□□□□ -0.241e-6■■■■□ 19.7
EXOSC5Q9NQT4 C1orf159-217ENST00000480643 579 ntTSL 412.21□□□□□ -0.451e-6■■■■□ 19.7
EXOSC5Q9NQT4 C1orf159-215ENST00000475119 740 ntAPPRIS ALT2 TSL 312.18□□□□□ -0.461e-6■■■■□ 19.7
EXOSC5Q9NQT4 C1orf159-209ENST00000462097 836 ntAPPRIS ALT2 TSL 312.09□□□□□ -0.471e-6■■■■□ 19.7
EXOSC5Q9NQT4 C1orf159-216ENST00000477196 3214 ntTSL 211.92□□□□□ -0.51e-6■■■■□ 19.7
EXOSC5Q9NQT4 ERC1-205ENST00000440394 7040 ntTSL 1 (best)13.43□□□□□ -0.262e-6■■■■□ 19.7
EXOSC5Q9NQT4 ERC1-212ENST00000542302 4323 ntTSL 513.19□□□□□ -0.32e-6■■■■□ 19.7
EXOSC5Q9NQT4 ERC1-219ENST00000546231 4390 ntTSL 5 BASIC13.09□□□□□ -0.312e-6■■■■□ 19.7
EXOSC5Q9NQT4 ERC1-201ENST00000347735 4955 ntTSL 1 (best)12.59□□□□□ -0.392e-6■■■■□ 19.7
EXOSC5Q9NQT4 ERC1-218ENST00000545948 2881 ntTSL 1 (best)8.47□□□□□ -1.052e-6■■■■□ 19.7
EXOSC5Q9NQT4 ERC1-225ENST00000611180 2832 ntTSL 5 BASIC8.42□□□□□ -1.062e-6■■■■□ 19.7
EXOSC5Q9NQT4 ERC1-213ENST00000543086 9241 ntTSL 1 (best) BASIC8.26□□□□□ -1.092e-6■■■■□ 19.7
EXOSC5Q9NQT4 ERC1-203ENST00000360905 5789 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.152e-6■■■■□ 19.7
EXOSC5Q9NQT4 ERC1-202ENST00000355446 5796 ntTSL 1 (best) BASIC7.66□□□□□ -1.182e-6■■■■□ 19.7
EXOSC5Q9NQT4 ERC1-204ENST00000397203 9118 ntTSL 5 BASIC6.9□□□□□ -1.312e-6■■■■□ 19.7
EXOSC5Q9NQT4 ERC1-222ENST00000589028 9202 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.482e-6■■■■□ 19.7
EXOSC5Q9NQT4 CEP44-210ENST00000515299 913 ntTSL 514.03□□□□□ -0.162e-6■■■■□ 19.7
EXOSC5Q9NQT4 CEP44-209ENST00000514712 605 ntTSL 412.31□□□□□ -0.442e-6■■■■□ 19.7
EXOSC5Q9NQT4 CEP44-205ENST00000503053 732 ntTSL 510.04□□□□□ -0.82e-6■■■■□ 19.7
EXOSC5Q9NQT4 CEP44-204ENST00000457424 3290 ntTSL 2 BASIC8.57□□□□□ -1.042e-6■■■■□ 19.7
EXOSC5Q9NQT4 CEP44-202ENST00000396791 3824 ntTSL 1 (best)7.45□□□□□ -1.222e-6■■■■□ 19.7
EXOSC5Q9NQT4 CEP44-207ENST00000505124 600 ntTSL 46.79□□□□□ -1.322e-6■■■■□ 19.7
EXOSC5Q9NQT4 CEP44-206ENST00000503780 4534 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.542e-6■■■■□ 19.7
EXOSC5Q9NQT4 TASP1-206ENST00000480436 2302 ntTSL 513.16□□□□□ -0.31e-6■■■■□ 19.7
EXOSC5Q9NQT4 TASP1-201ENST00000337743 2352 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51e-6■■■■□ 19.7
EXOSC5Q9NQT4 TASP1-204ENST00000465381 993 ntTSL 510.65□□□□□ -0.71e-6■■■■□ 19.7
EXOSC5Q9NQT4 TASP1-203ENST00000455532 1000 ntTSL 57.52□□□□□ -1.211e-6■■■■□ 19.7
EXOSC5Q9NQT4 RCL1-203ENST00000381732 804 ntTSL 2 BASIC9.15□□□□□ -0.941e-6■■■■□ 19.7
EXOSC5Q9NQT4 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC19.44■□□□□ 0.77e-7■■■■□ 19.7
EXOSC5Q9NQT4 STRBP-203ENST00000407982 2751 ntTSL 1 (best)18.96■□□□□ 0.637e-7■■■■□ 19.7
EXOSC5Q9NQT4 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.37e-7■■■■□ 19.7
EXOSC5Q9NQT4 ABCC4-201ENST00000376887 5839 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.251e-6■■■■□ 19.7
EXOSC5Q9NQT4 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC12.49□□□□□ -0.412e-7■■■■□ 19.7
EXOSC5Q9NQT4 AC007319.1-201ENST00000453517 802 ntTSL 3 BASIC11.05□□□□□ -0.642e-7■■■■□ 19.7
EXOSC5Q9NQT4 DYRK1A-206ENST00000455097 338 ntTSL 1 (best)8.33□□□□□ -1.083e-7■■■■□ 19.6
EXOSC5Q9NQT4 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.412e-6■■■■□ 19.6
EXOSC5Q9NQT4 SCLT1-202ENST00000439369 966 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.712e-6■■■■□ 19.6
EXOSC5Q9NQT4 SCLT1-201ENST00000281142 3055 ntAPPRIS P3 TSL 2 BASIC9.93□□□□□ -0.822e-6■■■■□ 19.6
EXOSC5Q9NQT4 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.177e-7■■■■□ 19.6
EXOSC5Q9NQT4 PTK2-222ENST00000520475 570 ntTSL 56.12□□□□□ -1.432e-6■■■■□ 19.5
EXOSC5Q9NQT4 PTK2-232ENST00000521395 540 ntTSL 46.05□□□□□ -1.442e-6■■■■□ 19.5
EXOSC5Q9NQT4 DGCR8-209ENST00000495826 4695 ntTSL 1 (best)12.53□□□□□ -0.45e-7■■■■□ 19.5
EXOSC5Q9NQT4 DGCR8-203ENST00000407755 4129 ntTSL 1 (best) BASIC10.54□□□□□ -0.725e-7■■■■□ 19.5
EXOSC5Q9NQT4 DGCR8-210ENST00000498171 3661 ntTSL 1 (best)10.36□□□□□ -0.755e-7■■■■□ 19.5
EXOSC5Q9NQT4 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC16.4■□□□□ 0.223e-7■■■■□ 19.5
EXOSC5Q9NQT4 WDR41-205ENST00000505129 1042 ntTSL 216.19■□□□□ 0.183e-7■■■■□ 19.5
EXOSC5Q9NQT4 WDR41-219ENST00000511791 429 ntTSL 313.61□□□□□ -0.233e-7■■■■□ 19.5
EXOSC5Q9NQT4 WDR41-206ENST00000506307 582 ntTSL 312.27□□□□□ -0.453e-7■■■■□ 19.5
EXOSC5Q9NQT4 WDR41-201ENST00000296679 3958 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.683e-7■■■■□ 19.5
EXOSC5Q9NQT4 WDR41-213ENST00000509701 949 ntTSL 28.74□□□□□ -1.013e-7■■■■□ 19.5
EXOSC5Q9NQT4 WDR41-227ENST00000515253 1507 ntTSL 25.6□□□□□ -1.513e-7■■■■□ 19.5
EXOSC5Q9NQT4 WDR41-202ENST00000502528 3268 ntTSL 1 (best)5.39□□□□□ -1.553e-7■■■■□ 19.5
EXOSC5Q9NQT4 WDR41-218ENST00000511630 516 ntTSL 33.99□□□□□ -1.773e-7■■■■□ 19.5
EXOSC5Q9NQT4 WDR41-211ENST00000507654 562 ntTSL 53.73□□□□□ -1.813e-7■■■■□ 19.5
EXOSC5Q9NQT4 CLASP2-213ENST00000480013 5972 ntTSL 5 BASIC7.84□□□□□ -1.158e-7■■■■□ 19.5
EXOSC5Q9NQT4 CLASP2-205ENST00000461133 4814 ntTSL 5 BASIC5.37□□□□□ -1.558e-7■■■■□ 19.5
EXOSC5Q9NQT4 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC18.75■□□□□ 0.592e-7■■■■□ 19.5
EXOSC5Q9NQT4 ATP11B-201ENST00000323116 7325 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.212e-7■■■■□ 19.5
EXOSC5Q9NQT4 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.367e-8■■■■□ 19.5
EXOSC5Q9NQT4 ABHD5-207ENST00000486764 618 ntTSL 215.8■□□□□ 0.127e-8■■■■□ 19.5
EXOSC5Q9NQT4 ABHD5-203ENST00000454293 464 ntTSL 315.78■□□□□ 0.127e-8■■■■□ 19.5
EXOSC5Q9NQT4 ABHD5-201ENST00000013894 833 ntTSL 315.31■□□□□ 0.047e-8■■■■□ 19.5
EXOSC5Q9NQT4 ABHD5-204ENST00000456453 876 ntTSL 410.55□□□□□ -0.727e-8■■■■□ 19.5
EXOSC5Q9NQT4 LBR-204ENST00000424022 478 ntTSL 35.5□□□□□ -1.539e-7■■■■□ 19.4
EXOSC5Q9NQT4 C3orf35-204ENST00000425932 1528 ntAPPRIS ALT2 TSL 1 (best) BASIC8.7□□□□□ -1.029e-7■■■■□ 19.4
EXOSC5Q9NQT4 NUDT3-201ENST00000607016 9905 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.361e-7■■■■□ 19.4
EXOSC5Q9NQT4 RPS10-NUDT3-202ENST00000639725 4782 ntAPPRIS P1 TSL 5 BASIC9.48□□□□□ -0.891e-7■■■■□ 19.4
EXOSC5Q9NQT4 RPS10-NUDT3-203ENST00000639877 2911 ntAPPRIS P1 TSL 5 BASIC8.5□□□□□ -1.051e-7■■■■□ 19.4
EXOSC5Q9NQT4 RPS10-NUDT3-201ENST00000605528 595 ntTSL 56.3□□□□□ -1.41e-7■■■■□ 19.4
EXOSC5Q9NQT4 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC14.05□□□□□ -0.163e-6■■■■□ 19.4
EXOSC5Q9NQT4 TLK1-203ENST00000409443 2783 ntTSL 214.5□□□□□ -0.093e-6■■■■□ 19.4
EXOSC5Q9NQT4 TLK1-204ENST00000413010 603 ntTSL 513.48□□□□□ -0.253e-6■■■■□ 19.4
EXOSC5Q9NQT4 TLK1-202ENST00000360843 5726 ntTSL 1 (best) BASIC11.91□□□□□ -0.53e-6■■■■□ 19.4
EXOSC5Q9NQT4 TLK1-205ENST00000431350 5663 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.593e-6■■■■□ 19.4
EXOSC5Q9NQT4 TLK1-201ENST00000359766 4321 ntTSL 59.19□□□□□ -0.943e-6■■■■□ 19.4
EXOSC5Q9NQT4 TLK1-209ENST00000470340 521 ntTSL 46.47□□□□□ -1.373e-6■■■■□ 19.4
EXOSC5Q9NQT4 TLK1-212ENST00000521943 2605 ntTSL 2 BASIC3.92□□□□□ -1.783e-6■■■■□ 19.4
EXOSC5Q9NQT4 DYRK1A-207ENST00000462274 1189 ntTSL 1 (best)19.62■□□□□ 0.734e-7■■■■□ 19.4
EXOSC5Q9NQT4 DYRK1A-201ENST00000338785 5498 ntTSL 1 (best) BASIC6.55□□□□□ -1.364e-7■■■■□ 19.4
EXOSC5Q9NQT4 DYRK1A-205ENST00000426672 519 ntTSL 53.68□□□□□ -1.824e-7■■■■□ 19.4
EXOSC5Q9NQT4 CTDSPL2-209ENST00000560620 863 ntTSL 310.23□□□□□ -0.771e-6■■■■□ 19.4
EXOSC5Q9NQT4 CTDSPL2-211ENST00000561189 742 ntTSL 53.55□□□□□ -1.841e-6■■■■□ 19.4
EXOSC5Q9NQT4 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.41□□□□□ -2.181e-6■■■■□ 19.4
EXOSC5Q9NQT4 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.368e-7■■■■□ 19.3
EXOSC5Q9NQT4 CSNK1D-221ENST00000582844 957 ntTSL 516.42■□□□□ 0.228e-7■■■■□ 19.3
EXOSC5Q9NQT4 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC14.17□□□□□ -0.148e-7■■■■□ 19.3
EXOSC5Q9NQT4 CSNK1D-217ENST00000581241 6094 ntTSL 213.51□□□□□ -0.258e-7■■■■□ 19.3
EXOSC5Q9NQT4 CSNK1D-205ENST00000403276 1040 ntTSL 213.17□□□□□ -0.38e-7■■■■□ 19.3
EXOSC5Q9NQT4 CSNK1D-223ENST00000584472 586 ntTSL 413.17□□□□□ -0.38e-7■■■■□ 19.3
EXOSC5Q9NQT4 CSNK1D-202ENST00000314028 3712 ntAPPRIS P4 TSL 1 (best) BASIC12.83□□□□□ -0.368e-7■■■■□ 19.3
EXOSC5Q9NQT4 CSNK1D-213ENST00000580446 612 ntTSL 312.41□□□□□ -0.428e-7■■■■□ 19.3
EXOSC5Q9NQT4 CSNK1D-211ENST00000579316 692 ntTSL 211.8□□□□□ -0.528e-7■■■■□ 19.3
EXOSC5Q9NQT4 CSNK1D-219ENST00000581660 611 ntTSL 511.8□□□□□ -0.528e-7■■■■□ 19.3
EXOSC5Q9NQT4 CSNK1D-207ENST00000578194 567 ntTSL 410.23□□□□□ -0.778e-7■■■■□ 19.3
EXOSC5Q9NQT4 CSNK1D-226ENST00000585026 563 ntTSL 58.77□□□□□ -1.018e-7■■■■□ 19.3
EXOSC5Q9NQT4 CSNK1D-210ENST00000579308 598 ntTSL 28.44□□□□□ -1.068e-7■■■■□ 19.3
EXOSC5Q9NQT4 AIMP1-201ENST00000358008 2412 ntAPPRIS P3 TSL 2 BASIC9.01□□□□□ -0.976e-7■■■■□ 19.3
EXOSC5Q9NQT4 AIMP1-203ENST00000442366 2519 ntAPPRIS P3 TSL 5 BASIC6.53□□□□□ -1.366e-7■■■■□ 19.3
Retrieved 100 of 8,799 protein–RNA pairs in 348 ms