RNA–Protein interactions for RNA: ENST00000546231.6

ERC1-219, Transcript of ELKS/RAB6-interacting/CAST family member 1, humanhuman

TSL 5 BASIC

Gene ERC1, Length 4,390 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERC1-219ENST00000546231 NISCHQ9Y2I1 1504 aa27.73■■■□□ 2.03
ERC1-219ENST00000546231 DCAF8L2P0C7V8 631 aa26.3■■□□□ 1.8
ERC1-219ENST00000546231 SHROOM4Q9ULL8 1493 aa25.64■■□□□ 1.7
ERC1-219ENST00000546231 SUPT5HO00267 1087 aaKnown RBP25.39■■□□□ 1.66
ERC1-219ENST00000546231 EHMT2Q96KQ7 1210 aa24.28■■□□□ 1.48
ERC1-219ENST00000546231 FAM9AQ8IZU1 332 aaPredicted RBP23.82■■□□□ 1.4
ERC1-219ENST00000546231 PCGF6Q9BYE7 350 aa23.75■■□□□ 1.39
ERC1-219ENST00000546231 HRCP23327 699 aa23.56■■□□□ 1.36
ERC1-219ENST00000546231 CHIC1Q5VXU3 224 aa23.54■■□□□ 1.36
ERC1-219ENST00000546231 ABCC9O60706 1549 aa23.42■■□□□ 1.34
ERC1-219ENST00000546231 TTBK1Q5TCY1 1321 aaPredicted RBP23.32■■□□□ 1.32
ERC1-219ENST00000546231 TRIM41Q8WV44 630 aa23.3■■□□□ 1.32
ERC1-219ENST00000546231 LOC105371045A0A1W2PR82 267 aa23.29■■□□□ 1.32
ERC1-219ENST00000546231 ZCCHC6Q5VYS8 1495 aaKnown RBP23.16■■□□□ 1.3
ERC1-219ENST00000546231 PPARGC1BQ86YN6 1023 aaKnown RBP23.08■■□□□ 1.29
ERC1-219ENST00000546231 RANGAP1P46060 587 aaPredicted RBP23.06■■□□□ 1.28
ERC1-219ENST00000546231 ZEB1P37275 1124 aaPredicted RBP23.05■■□□□ 1.28
ERC1-219ENST00000546231 TRIM26Q12899 539 aaPredicted RBP23.04■■□□□ 1.28
ERC1-219ENST00000546231 PABPN1Q86U42 306 aaKnown RBP eCLIP23.01■■□□□ 1.27
ERC1-219ENST00000546231 CCDC180Q9P1Z9 1646 aa22.83■■□□□ 1.24
ERC1-219ENST00000546231 MYO15BQ96JP2 1530 aa22.82■■□□□ 1.24
ERC1-219ENST00000546231 SCRIBQ14160 1630 aa22.73■■□□□ 1.23
ERC1-219ENST00000546231 UBTFP17480 764 aaKnown RBP22.68■■□□□ 1.22
ERC1-219ENST00000546231 DCAF1Q9Y4B6 1507 aa22.67■■□□□ 1.22
ERC1-219ENST00000546231 PELP1Q8IZL8 1130 aaKnown RBP22.6■■□□□ 1.21
ERC1-219ENST00000546231 CCER1Q8TC90 406 aaPredicted RBP22.52■■□□□ 1.2
ERC1-219ENST00000546231 APLP2Q06481 763 aa22.45■■□□□ 1.18
ERC1-219ENST00000546231 CENPBP07199 599 aaPredicted RBP22.36■■□□□ 1.17
ERC1-219ENST00000546231 ATP1B4Q9UN42 357 aaPredicted RBP22.29■■□□□ 1.16
ERC1-219ENST00000546231 RSF1Q96T23 1441 aaPredicted RBP22.19■■□□□ 1.14
ERC1-219ENST00000546231 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.13■■□□□ 1.13
ERC1-219ENST00000546231 CECR2Q9BXF3 1484 aa22.11■■□□□ 1.13
ERC1-219ENST00000546231 HNRNPUL2Q1KMD3 747 aaKnown RBP22.03■■□□□ 1.12
ERC1-219ENST00000546231 ITGAEP38570 1179 aa21.99■■□□□ 1.11
ERC1-219ENST00000546231 DIEXFQ68CQ4 756 aaKnown RBP21.96■■□□□ 1.11
ERC1-219ENST00000546231 YTHDC1Q96MU7 727 aaKnown RBP21.88■■□□□ 1.09
ERC1-219ENST00000546231 RB1CC1Q8TDY2 1594 aa21.8■■□□□ 1.08
ERC1-219ENST00000546231 NACADO15069 1562 aa21.8■■□□□ 1.08
ERC1-219ENST00000546231 CSRNP3Q8WYN3 585 aa21.8■■□□□ 1.08
ERC1-219ENST00000546231 ACIN1Q9UKV3 1341 aaKnown RBP21.8■■□□□ 1.08
ERC1-219ENST00000546231 MYT1Q01538 1121 aa21.79■■□□□ 1.08
ERC1-219ENST00000546231 SCAF1Q9H7N4 1312 aaKnown RBP21.78■■□□□ 1.08
ERC1-219ENST00000546231 MROH2BQ7Z745 1585 aa21.75■■□□□ 1.07
ERC1-219ENST00000546231 GTF3C3Q9Y5Q9 886 aa21.72■■□□□ 1.07
ERC1-219ENST00000546231 P3H3Q8IVL6 736 aa21.62■■□□□ 1.05
ERC1-219ENST00000546231 ZNF316A6NFI3 1004 aaPredicted RBP21.61■■□□□ 1.05
ERC1-219ENST00000546231 NEUROD1Q13562 356 aa21.57■■□□□ 1.04
ERC1-219ENST00000546231 WIZO95785 1651 aa21.51■■□□□ 1.03
ERC1-219ENST00000546231 ARID3CA6NKF2 412 aa21.44■■□□□ 1.02
ERC1-219ENST00000546231 BAZ1AQ9NRL2 1556 aaPredicted RBP21.43■■□□□ 1.02
ERC1-219ENST00000546231 ABCC8Q09428 1581 aa21.42■■□□□ 1.02
ERC1-219ENST00000546231 FAM50AQ14320 339 aaKnown RBP21.39■■□□□ 1.01
ERC1-219ENST00000546231 SOGA1O94964 1423 aa21.39■■□□□ 1.01
ERC1-219ENST00000546231 CEP162Q5TB80 1403 aa21.39■■□□□ 1.01
ERC1-219ENST00000546231 CCDC88BA6NC98 1476 aa21.35■■□□□ 1.01
ERC1-219ENST00000546231 BAZ1BQ9UIG0 1483 aaKnown RBP21.31■■□□□ 1
ERC1-219ENST00000546231 TNIKQ9UKE5 1360 aa21.3■■□□□ 1
ERC1-219ENST00000546231 WRNQ14191 1432 aaPredicted RBP eCLIP21.3■■□□□ 1
ERC1-219ENST00000546231 EEA1Q15075 1411 aa21.3■■□□□ 1
ERC1-219ENST00000546231 FBLN2P98095 1184 aa21.25■□□□□ 0.99
ERC1-219ENST00000546231 GOLGA3Q08378 1498 aa21.19■□□□□ 0.98
ERC1-219ENST00000546231 CNGB1Q14028 1251 aaPredicted RBP21.18■□□□□ 0.98
ERC1-219ENST00000546231 NEFLP07196 543 aa21.15■□□□□ 0.98
ERC1-219ENST00000546231 MIER1Q8N108 512 aa21.15■□□□□ 0.98
ERC1-219ENST00000546231 CLIP1P30622 1438 aa21.12■□□□□ 0.97
ERC1-219ENST00000546231 RUSC2Q8N2Y8 1516 aa21.11■□□□□ 0.97
ERC1-219ENST00000546231 SMARCA4P51532 1647 aa21.02■□□□□ 0.96
ERC1-219ENST00000546231 CEP164Q9UPV0 1460 aa21.01■□□□□ 0.95
ERC1-219ENST00000546231 POLR3GLQ9BT43 218 aa21.01■□□□□ 0.95
ERC1-219ENST00000546231 TOP2AP11388 1531 aaKnown RBP21■□□□□ 0.95
ERC1-219ENST00000546231 CLSPNQ9HAW4 1339 aa20.99■□□□□ 0.95
ERC1-219ENST00000546231 TRIM52Q96A61 297 aa20.95■□□□□ 0.94
ERC1-219ENST00000546231 ATAD2BQ9ULI0 1458 aa20.93■□□□□ 0.94
ERC1-219ENST00000546231 ERICH6Q7L0X2 663 aa20.85■□□□□ 0.93
ERC1-219ENST00000546231 CHIC2Q9UKJ5 165 aa20.84■□□□□ 0.93
ERC1-219ENST00000546231 MYT1LQ9UL68 1186 aa20.83■□□□□ 0.92
ERC1-219ENST00000546231 SMARCA2P51531 1590 aa20.82■□□□□ 0.92
ERC1-219ENST00000546231 VPS8Q8N3P4 1428 aa20.82■□□□□ 0.92
ERC1-219ENST00000546231 KANK4Q5T7N3 995 aaPredicted RBP20.81■□□□□ 0.92
ERC1-219ENST00000546231 HIRIP3Q9BW71 556 aaPredicted RBP20.81■□□□□ 0.92
ERC1-219ENST00000546231 ZNF777Q9ULD5 760 aaPredicted RBP20.8■□□□□ 0.92
ERC1-219ENST00000546231 KIF27Q86VH2 1401 aa20.8■□□□□ 0.92
ERC1-219ENST00000546231 BCANQ96GW7 911 aa20.79■□□□□ 0.92
ERC1-219ENST00000546231 ZNF326Q5BKZ1 582 aaKnown RBP20.76■□□□□ 0.91
ERC1-219ENST00000546231 CUX2O14529 1486 aa20.76■□□□□ 0.91
ERC1-219ENST00000546231 RAPGEF2Q9Y4G8 1499 aa20.73■□□□□ 0.91
ERC1-219ENST00000546231 ANP32CO43423 234 aa20.71■□□□□ 0.91
ERC1-219ENST00000546231 TDRD9Q8NDG6 1382 aaKnown RBP20.64■□□□□ 0.89
ERC1-219ENST00000546231 CARMIL1Q5VZK9 1371 aa20.64■□□□□ 0.89
ERC1-219ENST00000546231 DDX10Q13206 875 aaKnown RBP20.64■□□□□ 0.89
ERC1-219ENST00000546231 FKBP8Q14318 412 aa20.6■□□□□ 0.89
ERC1-219ENST00000546231 RRP7BPQ9NSQ0 103 aa20.6■□□□□ 0.89
ERC1-219ENST00000546231 MTUS2Q5JR59 1369 aa20.59■□□□□ 0.89
ERC1-219ENST00000546231 SUPT16HQ9Y5B9 1047 aaKnown RBP20.58■□□□□ 0.89
ERC1-219ENST00000546231 SIN3AQ96ST3 1273 aa20.56■□□□□ 0.88
ERC1-219ENST00000546231 DNAJC5BQ9UF47 199 aa20.56■□□□□ 0.88
ERC1-219ENST00000546231 CHMP7Q8WUX9 453 aaPredicted RBP20.55■□□□□ 0.88
ERC1-219ENST00000546231 BICRAQ9NZM4 1560 aa20.55■□□□□ 0.88
ERC1-219ENST00000546231 CADPSQ9ULU8 1353 aa20.54■□□□□ 0.88
ERC1-219ENST00000546231 CCNB3Q8WWL7 1395 aa20.53■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms